Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0747 ATGAGAGTTCCCGTCTCCGATCACCAAACCGTCGCCGCCAACCCTAAACTCACCTCCTCCGCTGCCGCCCGAACCATCGCCTTCCACACCTCCGATATTCCAAACCTCTCCTACGAACCTACCTCCGTCCTCGATCTCCGGCGCAGCCCCAGTCCCGTGGCGCCCGACAAGCCCCCCGCCGCCGACGCTCCTCCTCTCGACTGGGACGAAAATGCTCTCCACAACCTCGATTGGGACTCCATCATCGGCGATTTGGGCTTACACGACGATCACTCCAACAACTCTGCTCTCAAGAACACTTCCTCCTCGGATCCCATTCCCGATCATGTCCCCGAGTTCCTCCATCACTCCCAGCCCTTCGATCACGCTCCCCTCGTCTCCCCTGACTTCTTCCTCTCCGATCCCTATTCCAATCACACCACCATGGCCGTTCAGGGCTTCAATTCCTTCGACTCCAACCTAGGGCTCGAATTCCTCGAAGATATCGCACGCGCTGCCGACTGCGTCGATTCCAACGAATTGCAACTCGCTCACGTGATATTGGAGCGGCTCAATCAACGTCTTCAATCCTCCACCGGAAAGCCGCTCCAGCGAGCCGCTTTCTTCTTCAAGGAGGCTCTCCAGTCTCTCCTCTCCGGTTCCGGTTCCGGTTCCAATCGGCCCAATCGCCTCTCCTCCTGGCCCGAAATCGTCCACACCATTAGGGCTTACAAGGCCTTCTCTGCGATTTCTCCGATTCCGATGTTCTCTCACTTCACCACCAATCAGGCGCTTCTCGAAGCTCTCAACGCCTCTTCTTTCATCCATGTAATTGATTTTGATATCGGATTTGGAGGTCAGTACGCCTCTTTCATGAAGGAGATCTCCGAGAAAGCAGAGTCTCGGAAGGTTGCTCCGCCGGTGCTTCGGATTACGGCCATCGTGCCGGAGGAATTCGTGATTGAGAGCAGGTTGATTAGGGAGAATCTCTGCCAGTTCGCTCAGGATCTCAAAATCAGGTTCCATATAGATCTGGTGCCGCTTCGAACTTTCGAGACCATGTCGTTTAAATCGGTGAAGTTCATGGAAGGTGAGAAGGCGGCGATTCTGTTGACTCCGGCGATCTTCCGCCGCCTGGGGAGTATAAACAGCATAGGCTCTTTCCTCGGCGACGTCCGGCGGCTTTCGCCCTGCGTCGTCGTGTTCGTTGACGGCGAAGGCTGGTCGGACTCCGGAGCGGCATCGTTCAAGAGGAATTTGGTGGATAGCCTCGAGTTTTACGCCATGATGCTGGAGTCGCTGGACGCTGCGGCGGCGGGTGGCGATTGGGTGCGGAGGATCGAGACGTTTGTACTCCGGCCGAAGATTCTGGCGGCGGTGGAAGGGGCGGGAAGAATGGCGGCGCCGCCGTGGAGGGAGGTGTTCCACGGCGCCGGGATGAGGCCGGTGGCGCTGAGTCAGTTTGCGGATTTTCAGGCGGAGTGTCTACTTGGCAAAGTGCAGGTTCGAGGGTTCCAAGTAGGCAAACGGCATGCTGAGCTGGTGCTGTGCTGGCACGATAGGCCACTGGTTGCCACGTCGGCATGGAGGTGT 1572 57.57 MRVPVSDHQTVAANPKLTSSAAARTIAFHTSDIPNLSYEPTSVLDLRRSPSPVAPDKPPAADAPPLDWDENALHNLDWDSIIGDLGLHDDHSNNSALKNTSSSDPIPDHVPEFLHHSQPFDHAPLVSPDFFLSDPYSNHTTMAVQGFNSFDSNLGLEFLEDIARAADCVDSNELQLAHVILERLNQRLQSSTGKPLQRAAFFFKEALQSLLSGSGSGSNRPNRLSSWPEIVHTIRAYKAFSAISPIPMFSHFTTNQALLEALNASSFIHVIDFDIGFGGQYASFMKEISEKAESRKVAPPVLRITAIVPEEFVIESRLIRENLCQFAQDLKIRFHIDLVPLRTFETMSFKSVKFMEGEKAAILLTPAIFRRLGSINSIGSFLGDVRRLSPCVVVFVDGEGWSDSGAASFKRNLVDSLEFYAMMLESLDAAAAGGDWVRRIETFVLRPKILAAVEGAGRMAAPPWREVFHGAGMRPVALSQFADFQAECLLGKVQVRGFQVGKRHAELVLCWHDRPLVATSAWRC 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5171225 5172796 + MC10g0625 Mch10g0747 677840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0747 524 Pfam GRAS domain family 161 523 IPR005202 -
Mch10g0747 524 ProSiteProfiles GRAS family profile. 149 523 IPR005202 -
Mch10g0747 524 MobiDBLite consensus disorder prediction 47 68 - -
Mch10g0747 524 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 135 522 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0747 Mch-Chr10:5171225 Mch4g1757 Mch-Chr4:20601417 1.38E-33 dispersed
Mch10g1559 Mch-Chr10:15702033 Mch10g0747 Mch-Chr10:5171225 7.09E-72 transposed
Mch1g1496 Mch-Chr1:16458092 Mch10g0747 Mch-Chr10:5171225 3.47E-19 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42464 PF03514 GRAS 6.60E-90 CL0063 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0747 K27747 - csv:116401665 752.666