Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0757 ATGGCCGGTTTTTTCCAATTAGGCGGCGGAACAGGACCGAGCCAGCTCCCGACCACCGCCAGCACCGCCGCGGACGGGTTATTTTGGTACAAAAATCATCATGAGAGCTTGGAAGTATGGCAGCAGCAGCAGGAAGGGGGGTTTGTTAATTACTCGCCGGTGGTGGGTCCGGGGGTGAGCTCCGGCGATGAATCGCCGCCGAGATCGTCGCTGGTGATGGTGAGATCCGGGCGGGGAGGAGGGCAGGTGATCAGCTGCCAAGATTGTGGGAATCAAGCCAAGAAAGATTGCCTTCATATGCGGTGTAGAACTTGCTGCAAAAGCCGCGGCTTCGACTGCGAAACGCACGTCAAAAGCACCTGGATCCCCGCCTCCAAACGTCGCGACCGCCAACTCCGCAGCCTCACTAACCCCAAACGACTCCGAGACGACACGAATTCACCTTCTACACTTCCGTCAGGGTTGGAAATGGGGAATTTTCCGGCGGAGGTGAGCTCATCGGCGGTGTTTCGGTGCGTCCGAATGACGGCGTTGGACGAAACGGAGGAGCAATATGCATATCAAACGGCGGTGAATATCGGAGGCCATATCTTCAAGGGCATTCTCTACGACCACGGCCCTGAACAACCCAATTCCTCCGCCGTCTCCACCGCCCCAATCCCCGCCGGCGCCGTCCATGAATTCCCGCCCATCAGCGCCGCATTGCTCGATCCTCCTCCGCCGTACCCTACTCCTCTCAACGCCTACATCGCCGCCGCCGGTACGCAATTTTTTCTTCCCCCAACATCTTAG 792 58.33 MAGFFQLGGGTGPSQLPTTASTAADGLFWYKNHHESLEVWQQQQEGGFVNYSPVVGPGVSSGDESPPRSSLVMVRSGRGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWIPASKRRDRQLRSLTNPKRLRDDTNSPSTLPSGLEMGNFPAEVSSSAVFRCVRMTALDETEEQYAYQTAVNIGGHIFKGILYDHGPEQPNSSAVSTAPIPAGAVHEFPPISAALLDPPPPYPTPLNAYIAAAGTQFFLPPTS 263
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 5285591 5287625 + MC10g0634 Mch10g0757 677850
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0757 263 MobiDBLite consensus disorder prediction 128 158 - -
Mch10g0757 263 NCBIfam putative zinc finger domain, LRP1 type 85 127 IPR006510 -
Mch10g0757 263 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 257 IPR007818 GO:0003677(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0045893(PANTHER)
Mch10g0757 263 Pfam Domain of unknown function (DUF702) 84 208 - -
Mch10g0757 263 NCBIfam LRP1 C-terminal domain 160 207 IPR006511 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0757 Mch-Chr10:5285591 Mch8g0817 Mch-Chr8:5797384 5.92E-57 dispersed
Mch1g1555 Mch-Chr1:16831414 Mch10g0757 Mch-Chr10:5285591 1.76E-75 wgd
Mch10g0757 Mch-Chr10:5285591 Mch11g0151 Mch-Chr11:953358 6.11E-62 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42468 PF05142 DUF702 6.70E-54 No_clan Mch TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0757 K27807 - csv:101216097 303.523