Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0764 ATGGCTCGATCTCGAAGCTTCCTCTTTGCTTTTGCTCTTCTTTCCTTCGCTTCGGTTTGTTTCTCTCACAAGATCGGCAGTGGCGGTGGTGGTAGCAACGGTGGTTATTTGTATCCTCAGTTCTATGATCATTCTTGTCCAAGAGCTCAAGAGATTGTGAAGTCCATAGTGGCTAAGGCATTCGCTAAAGAAGCTCGCATGGCTGCTTCTTTGCTCCGCCTTCATTTTCATGATTGTTTTGTCAAGGGGTGCGATGCTTCACTTTTGTTAGATAGCAGTGGGAAAATAGCTAGTGAAAAAAGGTCCAATCCAAACAGGAACTCTGCTAGAGGCTTTGAAGTCATTGATGAGATCAAATCTGCCTTGGAAAAGGAGTGTCCCGAAACGGTTTCTTGTGCTGATATCTTAGCCATCGCTGCAAGAGACTCCACCGTCATAACAGGAGGACCTGGATGGGAGGTTCCACTTGGGAGAAGGGACTCAAGAGGAGCAAGTTTAAGTGGGTCTAACAATGACATTCCTGCCCCTAACAACACGTTCCAAACCATTCTCACCAAATTCAAGAGACAAGGCCTTGACATTGTTGATCTTGTTGCTCTTTCTGGAAGCCACACCATTGGAAACTCTCGATGCACGAGCTTCAGGCAACGACTCTACAACCAATCTGGTAATGCCAAGCCTGACCCCTCTCTCGATGCATCCTATGCAGCCCAGCTGCGCATGCAATGCCCGAGATCGGGGGGTGGCCAGAACCTCTTTTTCTTGGACTTCGTCAGCCCAACGAAGTTCGATAATCACTACTTCAAGAACCTTTTGGCCGCGAAGGGTCTGCTGAACTCCGATCAAGTTCTCTTGACGAAGAATCAGCAATCCGCGGAGCTGGTGAAGACATATGCAGAAAATTCTCAGCTGTTCTTTGAGCAGTTTGCCAAGTCCATGGTTAAGATGGGGAACATATCTCCTCTCACTGGCTCAAGGGGTGAGATCAGAAAAAACTGCAGGAAAGTCAACAGAAATTAG 1020 47.45 MARSRSFLFAFALLSFASVCFSHKIGSGGGGSNGGYLYPQFYDHSCPRAQEIVKSIVAKAFAKEARMAASLLRLHFHDCFVKGCDASLLLDSSGKIASEKRSNPNRNSARGFEVIDEIKSALEKECPETVSCADILAIAARDSTVITGGPGWEVPLGRRDSRGASLSGSNNDIPAPNNTFQTILTKFKRQGLDIVDLVALSGSHTIGNSRCTSFRQRLYNQSGNAKPDPSLDASYAAQLRMQCPRSGGGQNLFFLDFVSPTKFDNHYFKNLLAAKGLLNSDQVLLTKNQQSAELVKTYAENSQLFFEQFAKSMVKMGNISPLTGSRGEIRKNCRKVNRN 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5342204 5343932 - MC10g0641 Mch10g0764 677857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0764 339 SUPERFAMILY Heme-dependent peroxidases 37 337 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0764 339 Gene3D Peroxidase, domain 2 174 317 - -
Mch10g0764 339 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0764 339 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0764 339 PRINTS Plant peroxidase signature 46 65 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0764 339 PRINTS Plant peroxidase signature 311 324 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0764 339 PRINTS Plant peroxidase signature 70 90 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0764 339 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0764 339 PRINTS Plant peroxidase signature 270 287 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0764 339 PRINTS Plant peroxidase signature 254 269 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0764 339 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0764 339 Pfam Peroxidase 53 301 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0764 339 FunFam Peroxidase 174 316 - -
Mch10g0764 339 Gene3D - 41 337 - -
Mch10g0764 339 ProSiteProfiles Plant heme peroxidase family profile. 36 337 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0764 339 PANTHER PEROXIDASE 72-RELATED 11 336 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0764 339 CDD secretory_peroxidase 37 336 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch10g0764 339 FunFam Peroxidase 40 182 - -
Mch10g0764 339 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
Mch10g0764 339 PRINTS Haem peroxidase superfamily signature 68 82 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0764 339 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0764 339 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0764 339 PRINTS Haem peroxidase superfamily signature 256 271 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0764 339 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch10g0764 339 ProSitePatterns Peroxidases active site signature. 68 79 IPR019794 GO:0004601(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0764 Mch-Chr10:5342204 Mch4g2473 Mch-Chr4:25560499 2.68E-108 dispersed
Mch10g0676 Mch-Chr10:4660666 Mch10g0764 Mch-Chr10:5342204 9.92E-94 transposed
Mch3g0674 Mch-Chr3:11204637 Mch10g0764 Mch-Chr10:5342204 1.60E-69 transposed
Mch6g2145 Mch-Chr6:23836053 Mch10g0764 Mch-Chr10:5342204 9.98E-112 transposed
Mch7g1248 Mch-Chr7:15998632 Mch10g0764 Mch-Chr10:5342204 2.47E-94 transposed
Mch9g2277 Mch-Chr9:23025538 Mch10g0764 Mch-Chr10:5342204 2.52E-74 transposed
Mch6g2632 Mch-Chr6:28090963 Mch10g0764 Mch-Chr10:5342204 1.08E-86 transposed
Mch1g1543 Mch-Chr1:16768075 Mch10g0764 Mch-Chr10:5342204 1.37E-182 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0764 K00430 - csv:101223204 585.489