Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0774 ATGGCCACATTCGTGGAGGGACCGAGCGGAATCAGGGAAATGGGGAAGCATTATTTCACAATGTGGCAGACTCTGTTTGAAATCGATACGAAGTACGTTCCGATCAAGCCGATCGGGAGAGGAGCGTACGGCGTGGTGTGTTCTTCGATCAACCGAGAGACGAACGAGAAAGTGGCGATCAAGAAGATCAACAATGTGTTTGAGAATCGCATCGACGCCACGAGAACGCTGAGGGAACTGATGCTTCTCAGGCACATAAGGCACGATAACGTGATTGCTTTGAAGGATGTGATGATGCCGATCCATACAAAAAACTTTAAGGATGTTTATTTGGTTTACGAGCTCATGGATACGGATCTTCATCAGATTATCAAATCCTCTCAGCCCCTCTCCAATGACCATTGCAAGTATTTTATCTTTCAGTTGCTTTGCGGCTTGGAGTATCTCCATTCAGCTAACATTCTTCACCGAGACTTGAAGCCCGGGAACCTCCTCGTTAATGCTAATTGCGATCTGAAGATATGTGATTTCGGGTTGGCACGAACAGGCATAGGCAGTGGCCAGTTCATGACTGAATACGTTGTTACTCGCTGGTATCGCGCACCAGAGCTTCTCCTATGCAGTGACAACTATGGGACCTCCATTGACGTCTGGTCTGTGGGATGCATCTTTGCTGAGATTCTGGGTCGGAAACCAATTTTCCCGGGGACAGAGTGCCTCAACCAACTCAAGTTAATCATCAACATCCTTGGTAGTCCACAGGAAGCGGATATTGAGTTCATCGACAATGTAAAGGCCAGAAAGTACATCAAGTCGCTGCCCTTTACAAGGGGAATACACCTTTCACATCTGTATCCACACGCTGATCCTTTAGCTATAGACTTGTTGCAGAAGATGCTTGTGTTCGATCCCACAAAGAGAATTACTGTTGTCGAAGCACTTCAACATCCATACATGTCGGGGCTGTACGACCCGAAGTTCATCCCTCCTGTCCAGGTGCCCCTCACTCTCGACATAGACGAAACACTCGGGGAGCAAAAGATCAGAGAGTTGATGTTGAATGAGATGCTCTACTACCATCCTGAAGCTGTCTCAGCCTATTCTTGA 1107 47.34 MATFVEGPSGIREMGKHYFTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDATRTLRELMLLRHIRHDNVIALKDVMMPIHTKNFKDVYLVYELMDTDLHQIIKSSQPLSNDHCKYFIFQLLCGLEYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTGIGSGQFMTEYVVTRWYRAPELLLCSDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIINILGSPQEADIEFIDNVKARKYIKSLPFTRGIHLSHLYPHADPLAIDLLQKMLVFDPTKRITVVEALQHPYMSGLYDPKFIPPVQVPLTLDIDETLGEQKIRELMLNEMLYYHPEAVSAYS 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5386568 5389124 - MC10g0645 Mch10g0774 677867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0774 368 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524(InterPro)
Mch10g0774 368 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
Mch10g0774 368 FunFam Mitogen-activated protein kinase 18 126 - -
Mch10g0774 368 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 26 356 IPR050117 GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Mch10g0774 368 FunFam Mitogen-activated protein kinase 116 345 - -
Mch10g0774 368 SUPERFAMILY Protein kinase-like (PK-like) 24 326 IPR011009 -
Mch10g0774 368 CDD STKc_TEY_MAPK 26 361 - -
Mch10g0774 368 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g0774 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch10g0774 368 Pfam Protein kinase domain 34 319 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g0774 368 Gene3D Phosphorylase Kinase; domain 1 19 352 - -
Mch10g0774 368 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g0774 368 SMART serkin_6 32 319 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0774 Mch-Chr10:5386568 Mch8g0797 Mch-Chr8:5630872 1.34E-208 dispersed
Mch10g0774 Mch-Chr10:5386568 Mch8g0123 Mch-Chr8:720477 2.52E-141 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77009 PF00069 Pkinase 2.60E-71 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0774 K20537 - csv:101203896 672.93