Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0817 ATGGGACGGGTGCCATCAAGATGGAAAGGCAAGTGCGAATCAGGAGAAGAATTCAACTCCACAAACTGCAACAGAAAAATCATAAGCGCGCGTTGGTACAATAAAGGCTTCATTGCTGACGTGGGACAGGAGGCACTGGCGGAGGAGAACTCATCCGCAAGGGACTTCAACGGAAACGGAACCCACACCGCCAGCACAGCCGCAGGCTCCTTGGTGCCCAACGTCAGCTACGGGGGCCTCGGCGCTGGCACGGTGCAGGGAGGCGCCCCGCGTGCGCGCTTGGCCATATACAAGGCACTTTCGGTGATGGGGCAAGGGTCGGGAGCGGACATATTAATGGCCATGGACGATGCCATTCACGACGGCGTGGATGTGTTGTCTCTGTCGCTGTCGGTCGGCGGGGGTGCCTATTTTCCCTGA 420 58.57 MGRVPSRWKGKCESGEEFNSTNCNRKIISARWYNKGFIADVGQEALAEENSSARDFNGNGTHTASTAAGSLVPNVSYGGLGAGTVQGGAPRARLAIYKALSVMGQGSGADILMAMDDAIHDGVDVLSLSLSVGGGAYFP 139
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5711614 5712033 + MC10g_new0134 Mch10g0817 677910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0817 139 Pfam Subtilase family 46 131 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Mch10g0817 139 ProSiteProfiles Serine proteases, subtilase domain profile. 1 139 - -
Mch10g0817 139 Gene3D Peptidase S8/S53 domain 1 133 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Mch10g0817 139 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 131 IPR045051 -
Mch10g0817 139 SUPERFAMILY Subtilisin-like 19 135 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0817 Mch-Chr10:5711614 Mch10g0820 Mch-Chr10:5718836 1.74E-42 dispersed
Mch10g0815 Mch-Chr10:5676381 Mch10g0817 Mch-Chr10:5711614 3.87E-66 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0817 - - - 0.0