Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch10g0818 | ATGGCTGCACCTCATATTTCCGGCATCGTGGCTCTCCTTAAATCCATGCATCCCACTTGGTCACCCGCCGCCATTAAATCGGCCCTCATCACCACTGCACAAGAAAAAGACCCCTTGGGGGCGCCCATTTTGGCTGAGGGCTCTCCTCCCAAGTTGCCCGATCCATTTAACTACGGCGGCGAATTGGTGAACCCTAATGCCGTCGCAGACCCAGGCCTCATCTATGATCTAGCCATTGCAGACTGCGTTAAGTACTACCTGTGCGGCATGGGGTATAAGACCTCACATATTTCCCAGCTAATGAAGCAGAAAATAGGGTGCCCGTTACAAAGGCCATCGGTATCAGATTTGAATTTACCGACCATTACAGTACCAGCTCTCAGAAACTCCACCACCGTGACTCGTACGGTGACGAATGTGGGAAAGTCGAGCTCGATGTACAGGGCAGTGATTCGAGCCCCACCCGGCACGAGGGTGAGCGTGGAGCCCCGAGTGTTGGTGTTCAACTCCAGAGTGAAGAAGATTTCATTTAAGGTTACCATTTCCGCTGTGCTCCATATGAATTATGGGTACTCTTTTGGAAACTTAATTGGGAGCGATGGAGTGCATCCTGTCAAAACTCCCCTATCTTCAAATTGA | 639 | 50.86 | MAAPHISGIVALLKSMHPTWSPAAIKSALITTAQEKDPLGAPILAEGSPPKLPDPFNYGGELVNPNAVADPGLIYDLAIADCVKYYLCGMGYKTSHISQLMKQKIGCPLQRPSVSDLNLPTITVPALRNSTTVTRTVTNVGKSSSMYRAVIRAPPGTRVSVEPRVLVFNSRVKKISFKVTISAVLHMNYGYSFGNLIGSDGVHPVKTPLSSN | 212 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 5713127 | 5713853 | + | MC10g_new0135 | Mch10g0818 | 677911 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch10g0818 | 212 | Gene3D | Peptidase S8/S53 domain | 1 | 81 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
| Mch10g0818 | 212 | SUPERFAMILY | Subtilisin-like | 1 | 74 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
| Mch10g0818 | 212 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 1 | 181 | IPR045051 | - | |
| Mch10g0818 | 212 | Gene3D | - | 87 | 212 | - | - | |
| Mch10g0818 | 212 | Pfam | Subtilase family | 1 | 36 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
| Mch10g0818 | 212 | Pfam | Fibronectin type-III domain | 116 | 209 | IPR041469 | - | |
| Mch10g0818 | 212 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 1 | 69 | - | - | |
| Mch10g0818 | 212 | FunFam | Subtilisin-like protease SBT1.5 | 87 | 212 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch10g0818 | Mch-Chr10:5713127 | Mch2g0012 | Mch-Chr2:148578 | 7.16E-45 | dispersed | |
| Mch10g0818 | Mch-Chr10:5713127 | Mch10g0820 | Mch-Chr10:5718836 | 1.47E-79 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch10g0818 | - | - | - | 0.0 |