Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch10g0821 | ATGAATCAGCAGCAGCAGCAGTACGGGCAGCCTGAGGAGGAGGAGATGGAAAAATCCTCCCCTGGAGATCATCATCATCATCAATACGGCTCTTCCCTTTTTATAGAGAAGGAGCACATGTTCGATAAAGTTGTTACCCCAAGCGATGTGGGAAAATTGAACCGCTTGGTCATCCCAAAACAGCACGCCGAGAAGTACTTCCCCTTGGATTCCTCCTCCAACGAGAAGGGCCTGCTCTTGAACTTCGAGGACCGTACCGGCAAATCGTGGCGGTTCCGTTACTCCTACTGGACCAGCAGCCAGAGCTACGTGATGACCAAAGGATGGAGCCGCTTCGTCAAGGAGAAAAGACTCGACGCTGGTGATATCGTGTCCTTCCAACGCGAGGTTGGTAAAGATCGCTTTTTTATTGATTGGCGCCGCCGCCCAATTGTTGCTCACACCGCCACGCCGGACTTCCACCACCACCACCACCACCTCCACGGCGGCCCAATTCCGCAGCACCATTTTCAGGTTCACCAGTGGAGGAGTAGTAGTAGTAATAATCCTTTAGCCACACCCTTATCTTCTATTCCCAGGGACCACGTTTTCCACTTGAGTAGTAGTAGTAATCATCATAATAATAATAATAATAATGTCAGCCTATTTCATAATTATTCCACCTATAACAATAATCCCATCATCTATGGCGCTGGTTTGGGGTCTCCGGTTGTTTACCACCTCAGATCCGCCGCGGCTGGCGGTGGGGCACCGCCGCAGGAGGCCGTGTTGGAGTCGGTGCCGGTGGCGGGTCATGGAAATGGGAGGGCTGCAGCCAAGACATTGAGGCTGTTTGGGGTGAACATGGAATGCGCCGTGTCGGAGGAACACTCGGATGAATGCGACGTAACAACGTCGTCGTCCGAATTCCGTCTTTACAATGGAATGCCAATGTCGATGTCATTGCCAATGCCGACGCCGAACAACAACGACATCATCCCGACTACTGACTTTTTCGGAAAAGGGAAGTCGTCGATGTCGTCGTCCTTTGATTTTGGTACC | 1041 | 51.59 | MNQQQQQYGQPEEEEMEKSSPGDHHHHQYGSSLFIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRTGKSWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQREVGKDRFFIDWRRRPIVAHTATPDFHHHHHHLHGGPIPQHHFQVHQWRSSSSNNPLATPLSSIPRDHVFHLSSSSNHHNNNNNNVSLFHNYSTYNNNPIIYGAGLGSPVVYHLRSAAAGGGAPPQEAVLESVPVAGHGNGRAAAKTLRLFGVNMECAVSEEHSDECDVTTSSSEFRLYNGMPMSMSLPMPTPNNNDIIPTTDFFGKGKSSMSSSFDFGT | 347 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 5729867 | 5730907 | + | MC10g0686 | Mch10g0821 | 677914 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch10g0821 | 347 | CDD | B3_DNA | 39 | 137 | IPR003340 | GO:0003677(InterPro) | |
Mch10g0821 | 347 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 4 | 282 | IPR044800 | GO:0003700(InterPro) | |
Mch10g0821 | 347 | SUPERFAMILY | DNA-binding pseudobarrel domain | 38 | 141 | IPR015300 | - | |
Mch10g0821 | 347 | SMART | B3_2 | 41 | 143 | IPR003340 | GO:0003677(InterPro) | |
Mch10g0821 | 347 | Gene3D | - | 34 | 159 | IPR015300 | - | |
Mch10g0821 | 347 | Pfam | B3 DNA binding domain | 41 | 142 | IPR003340 | GO:0003677(InterPro) | |
Mch10g0821 | 347 | ProSiteProfiles | B3 DNA-binding domain profile. | 41 | 143 | IPR003340 | GO:0003677(InterPro) | |
Mch10g0821 | 347 | FunFam | B3 domain-containing protein | 34 | 152 | - | - | |
Mch10g0821 | 347 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Mch10g0821 | 347 | MobiDBLite | consensus disorder prediction | 11 | 28 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g0821 | Mch-Chr10:5729867 | Mch6g2382 | Mch-Chr6:25689779 | 8.63E-65 | dispersed | |
Mch10g0821 | Mch-Chr10:5729867 | Mch2g0348 | Mch-Chr2:2596558 | 1.74E-11 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
42474 | PF02362 | B3 | 2.70E-29 | CL0405 | Mch | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch10g0821 | K09287 | - | csv:101220139 | 327.791 |