Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0853 ATGGCTTCGTCGAATACTACAGCAGTGACTAAATGTCCATCTCCAATGAAAGCAACATCGAACGGCATTTTCCAGGGCGATCATCCTCTTGATTTTGCTCTCCCTCTTGTCATTCTGCAAATATGTTTGGTAGTCGTACTTACTCGCGGGCTTGCTTTTCTTCTCAGGCCGTTAAAGCAGCCACGAGTGATTGGAGAAATTATTGGAGGAATACTACTTGGTCCATCTGCTCTTGGACGTAACACAAACTTTCTTCATACGATATTTCCACCAAATAGTATAACACTGTTAGATACTATAGCAAATATTGGATTGTTATTCTTTCTCTTTCTTGTGGGTCTTGAGTTAGATCTACAGTCAATACGTCGTACCGGAAAGAAGGCCCTTGGCATTGCCATTACTGGAATATGCCTTCCATTTGTATTAGGAATTGGATCATCATTTGTCCTCCGAGGAACCATTTCCAAAGGTGTAAATGCTTCTGCGTTTCTCATATTCATGGGTGTTGCACTTTCAATAACGGCATTTCCTGTCTTAGCTCGTATTCTTGCCGAGCTTAAACTTCTAACCACTGACGTCGGTAGGCTGGCCATGTCTGCTGCAGCAGTGAACGACGTAGCTGCCTGGATTCTCCTTGCTCTTGCCATCGCATTATCTGGCTCTGATAAATCTCCCCTAACTGCGGTTTGGGTCCTTTTATCTGGCTGCGCCTTTGTCGTTGCAGCTATTGTCATTTTATCCCCAGTTTTCAAATGGATTACCAAGCAATGTTTTCAAGGGGAGCAAGTAAGTGAAATCTACATATGCGCCACATTAGCTATCGTCCTAGCCGCTGGATTTTGCACGGATTTTATTGGGATTCATGCTATGTTTGGAGCTTTTGTTGTAGGAGTATTAGTTCCAAAGGATCGACCATTAGTAGGTGCTTTGGTAGAGAAAATAGAGGATCTTGTTTCTGGTCTTTTCCTACCTCTTTACTTTGTGTCAAGTGGATTGAAGACCAATGTAGCCACAATTCAAGGAGCACAGTCCTGGGGTCTTCTAGTTTTAGTCATAGTTACTGCCTGTTTTGGAAAAATCGTTGGCACTTTTATCGTGACGGTTCTTTGTAAAATACCTGCGCGTGAGGCTCTCGCGTTAGGATTTCTAATGAACACCAAAGGTTTGGTGGAGCTTATTGTTCTCAATATTGGAAAAGACAGAAAGGTTTTGAATGATCAGACCTTTGCAATTATGATTCTAATGGCTCTTTTTACTACTTTCATCACCACTCCTCTTGTCGTTGCTGTATACAAGCCAGCGAGGAGCGCCAAATTAGGCGATTATAAGCACAGGAAAATCGAACGGAAAAACAAGAACACACAGCTCAGGATTTTGACCTGTTTCCATAGTGCAAGAAACATTCCATCAATTATAAATCTGCTGGAGGCCTCGAGAGGGACTGAGAAAGGTGAAGAACTTTGTGTATATGCAATGCATCTCATGGAGCTGTCTGAGAGGTCCTCAGCCATTCTAATGGTACATAAGGCGAGGAAAAATGGTTTGCCTTTCTGGAACAAGGGCCAGAGGTCAGATTCCAACCATGTTATCGTCGCGTTTGAAGCTTACCAACAACTGAGCAGAGTATTCATCCGACCGATGACAGCCATCTCTTCGATGTCTGACATACACGAAGACATCTGCGCTACTGCTGAAAGGAAAAGAACTGCAATCATAATTCTTCCGTTCCACAAGCACCAGAGGGTGGATGGTTCACTAGAGACTACTCGAAGCAGCATCCGCATCGTTAATCAGAATGTTCTCGAGCATGCTCCATGTTCGGTTGGAATATTGGTTGATCGTGGTTTGGGTGGAACAACCCATGTTTCATCGAGCAATGTTTCGTTTTTCATCACGGTTCTATTCTTTGGTGGTGGAGATGATCGCGAAGCGCTTTCTTATGGAGTTCGCATGGCCGAGCACCCTGGCATTAGATTGATGGTAATACGTTTCTTTGTTGAGTCTGAGCCTGTTGGGGAGATAGTCAGTGCTGATACCCTCGGGAAATCTTCTGCGAAGACCGTTTCTCAGGACTCTCAGGACGAGGAGTTTCTTGCTGAATTCAAGCAAAATGTGGGCAAGAGTGATTCCATCACATATGAAGAGAAAACCATAAAAAGTGCTGCAGAAGCAATGGATGCAGTGCAGGAGTTGAAAAACTGCAATCTGTATCTCATCGGCCGAACACCGTATCTCAAAGCAAGCTCTGGCTTAAACAGAAGCGACTGTCCGGAGCTCGGTCCAGTTGGGAACCTGTTGACTTCACCAAACTTCCCGATTGCAGCATCGGTTTTGGTGGTGCAGCAATATCGCTCCGGTTTACCGGTGAATTTGGCTTCATATTCTGCTGAGGGAGAATCAGAATCAGCATAG 2412 44.32 MASSNTTAVTKCPSPMKATSNGIFQGDHPLDFALPLVILQICLVVVLTRGLAFLLRPLKQPRVIGEIIGGILLGPSALGRNTNFLHTIFPPNSITLLDTIANIGLLFFLFLVGLELDLQSIRRTGKKALGIAITGICLPFVLGIGSSFVLRGTISKGVNASAFLIFMGVALSITAFPVLARILAELKLLTTDVGRLAMSAAAVNDVAAWILLALAIALSGSDKSPLTAVWVLLSGCAFVVAAIVILSPVFKWITKQCFQGEQVSEIYICATLAIVLAAGFCTDFIGIHAMFGAFVVGVLVPKDRPLVGALVEKIEDLVSGLFLPLYFVSSGLKTNVATIQGAQSWGLLVLVIVTACFGKIVGTFIVTVLCKIPAREALALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMILMALFTTFITTPLVVAVYKPARSAKLGDYKHRKIERKNKNTQLRILTCFHSARNIPSIINLLEASRGTEKGEELCVYAMHLMELSERSSAILMVHKARKNGLPFWNKGQRSDSNHVIVAFEAYQQLSRVFIRPMTAISSMSDIHEDICATAERKRTAIIILPFHKHQRVDGSLETTRSSIRIVNQNVLEHAPCSVGILVDRGLGGTTHVSSSNVSFFITVLFFGGGDDREALSYGVRMAEHPGIRLMVIRFFVESEPVGEIVSADTLGKSSAKTVSQDSQDEEFLAEFKQNVGKSDSITYEEKTIKSAAEAMDAVQELKNCNLYLIGRTPYLKASSGLNRSDCPELGPVGNLLTSPNFPIAASVLVVQQYRSGLPVNLASYSAEGESESA 803
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5985791 5990240 - MC10g_new0137 Mch10g0853 677946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0853 803 FunFam Cation/H(+) antiporter 15 36 438 - -
Mch10g0853 803 Pfam Sodium/hydrogen exchanger family 48 426 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Mch10g0853 803 Gene3D - 36 438 IPR038770 -
Mch10g0853 803 PANTHER CATION/H + ANTIPORTER 12 786 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0853 Mch-Chr10:5985791 Mch1g0737 Mch-Chr1:11227541 7.43E-253 dispersed
Mch10g0853 Mch-Chr10:5985791 Mch10g0855 Mch-Chr10:5995470 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0853 K26731 - csv:101223205 1345.1