Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0855 TTTGAATATAAAAGGGAGGTGGTAGTGCCAAAATTGCTTCATCCCATTTTCTCCATATCCTTCAAGAATTTTTCTTTTGGAGATAAGAATTGTATCTCATTTTCCAATCAAGAACTTTTGTCCACAAAAATTCAAGAAATGGCGATGAATGCGACCGCGGCGAGTAGTTGTCCGGCGATGATGAAGGCGACATCCAACGGCGTATTTCAGGGTGACAATCCGCTTGATTTTGCCCTTCCTTTGGCCATACTTCAGATATGTTTGGTCGTCATTCTCACTCGTCTTCTTGGTTTGCTTCTTCGTCCACTTCGACAGCCTCGAGTTATTGCTGAGATTGTTGGGGGGATTTTGCTGGGCCCGTCCGCGCTTGGCCGGAACAAGGATTACTTACATGCAATCTTCCCGCCGAAGAGCCTCACCGTTTTGGACACATTGGCCAATCTGGGTCTCCTGTTTTTCCTGTTTCTCGTCGGATTGGAGTTGGATCCCAAGTCCATCCGCCGCACCGGAAAACGGGCGATGAGCATTGCCTTCGCGGGGATTACCCTCCCTTTTCTCCTCGGCATTGGCACTTCCTTTGTCCTCCGAGCGACGATATCCAAAGGCGTTAATGAAGGGGCGTTTCTTGTTTTCATGGGTGTGGCTCTTTCCATCACTGCGTTTCCTGTTTTGGCGCGAATTTTGGCGGAGTTGAAGCTTTTGACGACGGATGTCGGCCGGATGGCGATGTCTGCCGCCGCTGTTAACGACGTGGCGGCCTGGATTCTTCTGGCGATTGCCATTGCACTCTCCGGGACTGGCAACTCCCCGCTCGTTTCCCTCTGGGTTTTCCTCTCCGGCTCCGGTTTTGTTCTGTTTTGCATCTTCACTGTCCCGCCGGCGTTCCGGTGGATGTCGCAGCGGTGCTCCGAGGGGGAACCGGTCAAGGAGTTGTACATTTGCGCCACGTTGTCCATCGTTTTGGCGGCCGGGTTCGTCACGGATTTGATCGGAATCCATGCTCTGTTCGGCGCTTTTGTGGTCGGAGTTCTCGTCCCCAAAGAAGGCCCATTCGCCGGAGCTCTCGTCGAGAAAGTCGAAGATCTCGTCTCCGGCCTCTTCCTGCCTCTGTACTTCGTTTCGAGCGGATTGAAAACAAACGTAGCAACGATTCAAGGAGCTCAATCGTGGGGTCTTCTCGTTCTCGTCATTTTCACAGCCTGTTTCGGGAAAATCATCGGAACTCTCTCTGTTTCCCTTCTCTGCAAAATGTCGATGGAGGAATCGCTCGCTTTGGGATTTTTGATGAACACCAAAGGCTTGGTGGAATTAATCGTCCTCAACATCGGCAAAGACAGGAAGGTTTTGAATGATCAAACATTCGCGATTATGGTTCTAATGGCAATTTTCACAACATTCATCACTACCCCAATTGTTATATCGGTTTACAAGCCGGCGAAAAAACTGAGCAGATCTAACTACACTCACAGAACTCTTTCTAGAGAAGATCCCAATTCCCAGCTCCGGATTCTAGCCTGTTTCCACTCCGTCGACAACATTCCGGCGACAATCAACCTCATCGAAGCCTCTCGGGGAATCGAAAAGAAAGAGGGGCTCTGTGTTTATGCTCTGCATCTGATGGAGCTAACAGAGAGATCCTCCGCCATTCTTATGGTCCACAAAGCAAGAAGAAACGGCGTTCCCTTCTGGAATAAAGGGCGGTCGGACTCCAATCGGATCGTCGTCGCTTTCGAAGCATTCCGGCAACTCAGCCGGGTCTCAATCCGGCCGATGACGGCGATTTCTGCTCTGTCCAACATGCACGATGATATCTGCAGCAGCGCGGAGAGGAAGAGGGCGGCCATTATAATTCTTCCGTTCCACAAGCATCAGAGAATCGACGGATCTCTGGAGACGACGAGGACCGATTACCGGTGGGTCAACCGGAAAGTTCTGGAACAAGCGCCGTGCTCTGTTGCGATTCTGGTAAACAGGGGACTCGGCGGCGGTTCCCACGTCTGTGCCAGCAACGTCTCCTCCGCCGTCACCGTCTTCTTCTTCGGCGGCCCGGACGACCGCGAGGCTCTGGCCTTCGGGAAAAGAATGTCGGAGCATCCCGGTATCAGACTGAAGGTTGTCCGATTCAAACCCACCGCCGGTCCCGCCCCCGAATTCGTCGCCGTCGACATCAACGAGAACAAAGAATTCGCCCCCAATTCCGCCGAATCTGCGGCCGACGAGCGAGAGTTATCGTCTGTAGAGTACGAAGAGATAGAAATGAGCAAAGGGGCCGACGGCATTGAAGCGATGAAGGAGTTCAGCAAATGCAATCTGATTTTGGTTGGGCAGATGCCGGAGGTGGAACTGGTAAATAGTCTGAACTTGAACAACTTGGAGTGCCCGGAGTTGGGCCCGATCGGCGGGTTCCTGGCGTCGCCGGAGTTTCCCACGTCGGCGTCGGTGCTGGTGGTGCATCAGTTTCGAGGT 2466 52.51 FEYKREVVVPKLLHPIFSISFKNFSFGDKNCISFSNQELLSTKIQEMAMNATAASSCPAMMKATSNGVFQGDNPLDFALPLAILQICLVVILTRLLGLLLRPLRQPRVIAEIVGGILLGPSALGRNKDYLHAIFPPKSLTVLDTLANLGLLFFLFLVGLELDPKSIRRTGKRAMSIAFAGITLPFLLGIGTSFVLRATISKGVNEGAFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLAIAIALSGTGNSPLVSLWVFLSGSGFVLFCIFTVPPAFRWMSQRCSEGEPVKELYICATLSIVLAAGFVTDLIGIHALFGAFVVGVLVPKEGPFAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGAQSWGLLVLVIFTACFGKIIGTLSVSLLCKMSMEESLALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMVLMAIFTTFITTPIVISVYKPAKKLSRSNYTHRTLSREDPNSQLRILACFHSVDNIPATINLIEASRGIEKKEGLCVYALHLMELTERSSAILMVHKARRNGVPFWNKGRSDSNRIVVAFEAFRQLSRVSIRPMTAISALSNMHDDICSSAERKRAAIIILPFHKHQRIDGSLETTRTDYRWVNRKVLEQAPCSVAILVNRGLGGGSHVCASNVSSAVTVFFFGGPDDREALAFGKRMSEHPGIRLKVVRFKPTAGPAPEFVAVDINENKEFAPNSAESAADERELSSVEYEEIEMSKGADGIEAMKEFSKCNLILVGQMPEVELVNSLNLNNLECPELGPIGGFLASPEFPTSASVLVVHQFRG 822
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5995470 6006783 - MC10g0718 Mch10g0855 677948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0855 822 FunFam Cation/H(+) antiporter 15 81 483 - -
Mch10g0855 822 Pfam Sodium/hydrogen exchanger family 92 471 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Mch10g0855 822 Gene3D - 81 484 IPR038770 -
Mch10g0855 822 PANTHER CATION/H + ANTIPORTER 57 820 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0855 Mch-Chr10:5995470 Mch1g0737 Mch-Chr1:11227541 2.56E-258 dispersed
Mch10g0853 Mch-Chr10:5985791 Mch10g0855 Mch-Chr10:5995470 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0855 K26731 - csv:101202937 1204.5