Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0936 GACTGTGAAAGTGAGAACAAAAAAAATACCCATGATTATTCATCTGCAAATCAGACTGCTCAAGCGTTAGATCAGATGAAAATCGATGGTTACAGAAGGATCAAAGCTGAGGAACCTGTTGAATTGCCTTGCATATCATCAAATGTTGAGCTTGATGAATGGGATCGAGGTAGTGTTGCAGTTACAGCCCCCAGAGCAGGAAGTACCTCTGCCCGTGCATCGTCCCTTCAATCGTTGAACTCTTCAAGTAACTTCCTTTCTCGCTTTAGTTTCATTCCCGGTAATGTAAGCTTCAGACTTAGTAGAGCAACCAGTTTAGGATCATCTAGATCTTATCCTGTGTCTTCAACAAGTCTCTCAATGTTGAATAATGAAGATGAGCTTCATTTATCGGACAGACCTGCTAGAGGTGGCGTGGATGATCAGGATGAAACTCAGCAAGGTAGCGACTTGCTTCCGGCATCTCTGGCTAGTGCAACTTGTTTTCAATTTTGTGGAGATAATTCTGCTAATTTTAGGTTAGATACACAACCTTCTGGTCTTTCTGACAACTTACAAGACAATCAGACAGTTTCTTCTACCCATGACATAGCTACTGATTGTGATGATGCAAGAGTAGAGCCTGATGGAAACCTTTCCCATCCAAGGATTCTTTCTGAAAATGAAAGCAGTTTGATTAGACAATTCGACAGACGAACTGGATCTAGGGAACCAGTTGAACGCAATTTTCGTTTCAGTCGGACCCTTAGTGTTGGAAGACTTCGTGATAGAGTTCTTCGAAGATCATCGTTATCTGACTTCACATTTTGTCCTCCGCAGCAAGAGGATGAGGAGAGAGATGTAAGTCAGACTGGTGATGACCGACATGTCCAGACTGCCGAGACAAGGGCTTTTTCGTCTGAAAATAATGCTATGACCTCTCCAACAACGTCGGGTTATCCAGCTTCTAGTCTATCTAGTTCCTTATTTAGCACCCAAGATTATGAAATGGAAACTACCAGACCTAGAGAAGCTAGATATCACGATTTGCTGGAACACAGGTCAAATTTCCTTGAACGGAGGAGAAGAATTCGTTCCCAGGTTCGTGCCCTACAGCGGTTGGGAAGTCGTTTTGAGAACCTATCTGGGCATGAGAGATCATGTATCTTATCTGGTCAACATAGAACCGGCCATTGTACTTGTCGTATCAATAATCGTGACACAAATATAAATGACAACACCAGCGCTAGAGCTAGTATATCAAGAATTGTAATGTTAGCTGAAGCCTTATTTGAGGTTCTGGATGAAATTCACCAGCAATCTGTGGTTTTGTCCTCTCGTCCCGCATCTTCAATTGGCTCTATGCCTGCACCAAACGATGTTGTAGATTCTTTGCCTGTTAAATTTTATTCCAAGTTGCAAAAGCATCAAAGCGAGGAAGTTGCCCAATGCTACATATGCCTGGTCGAGTATGAGGAAGGAGATAACATGAGAGTGTTGCCTTGCCATCACGAATTTCATGCATCATGTGTCGACAAGTGGTTGAAGGAGATCCACAGG 1539 42.88 DCESENKKNTHDYSSANQTAQALDQMKIDGYRRIKAEEPVELPCISSNVELDEWDRGSVAVTAPRAGSTSARASSLQSLNSSSNFLSRFSFIPGNVSFRLSRATSLGSSRSYPVSSTSLSMLNNEDELHLSDRPARGGVDDQDETQQGSDLLPASLASATCFQFCGDNSANFRLDTQPSGLSDNLQDNQTVSSTHDIATDCDDARVEPDGNLSHPRILSENESSLIRQFDRRTGSREPVERNFRFSRTLSVGRLRDRVLRRSSLSDFTFCPPQQEDEERDVSQTGDDRHVQTAETRAFSSENNAMTSPTTSGYPASSLSSSLFSTQDYEMETTRPREARYHDLLEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHERSCILSGQHRTGHCTCRINNRDTNINDNTSARASISRIVMLAEALFEVLDEIHQQSVVLSSRPASSIGSMPAPNDVVDSLPVKFYSKLQKHQSEEVAQCYICLVEYEEGDNMRVLPCHHEFHASCVDKWLKEIHR 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6613210 6615217 + MC10g0790 Mch10g0936 678029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0936 513 MobiDBLite consensus disorder prediction 1 21 - -
Mch10g0936 513 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 2 513 - -
Mch10g0936 513 FunFam Putative RING zinc finger domain superfamily protein 445 513 - -
Mch10g0936 513 Pfam Ring finger domain 476 510 IPR001841 -
Mch10g0936 513 MobiDBLite consensus disorder prediction 269 318 - -
Mch10g0936 513 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 439 513 IPR013083 -
Mch10g0936 513 SUPERFAMILY RING/U-box 454 510 - -
Mch10g0936 513 ProSiteProfiles Zinc finger RING-type profile. 477 507 IPR001841 -
Mch10g0936 513 MobiDBLite consensus disorder prediction 295 318 - -
Mch10g0936 513 MobiDBLite consensus disorder prediction 272 294 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0936 Mch-Chr10:6613210 Mch6g0661 Mch-Chr6:4500075 4.07E-38 dispersed
Mch10g0936 Mch-Chr10:6613210 Mch6g0156 Mch-Chr6:1047043 2.12E-06 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0936 - - - 0.0