Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch10g0959 | ATGGGAGTGGCAATGGCTGCCACTTCCCTTTCGAACCTGCCTTCGGCTGTCTTCCATGGAAATCTGCAGAGAAATGAATTTGGGTTTGTGGGTATGGCGAGACAACCGTCGGTTTGCTCTGCCACTACCGCCACCGCCAAGTTTCGGAAATCTAATCTTAGAGGTTCGGTTGTGAGGTGCCAATCAGCTCGAACCGATGAACCTAAAACAAAAAGAAATCTACTCGACAATGCAAGCAATCTCCTTACCAATTTGTTGAGTGGTGGAAATCTGGGATCTATGCCAATAGCTGAAGGTGCAGTCTCGGATTTGTTTGGTCGCCCACTCTTCTTTGCTCTGTATGATTGGTTCTTAGAGCATGGATCTGTCTATAAACTCGCTTTTGGACCAAAAGCCTTTGTTGTTGTATCAGATCCCATTGTGGCAAGATATGTTCTTAGAGAAAATGCATTTGGTTATGACAAGGGAGTGCTTGCTGATATTCTAGAACCAATAATGGGTAAAGGACTAATACCAGCTGACCTTGACACTTGGAAGCAGAGGAGACGAGTTATTGCTCCAGGATTCCATGCCTTATACTTGGAAGCTATGACCAAAGTATTCACTGATTGTTCAGAACGATCAATGTTGAAATTGGAGAAGCTTCTAGGAGAAGGTGAACGAGCGGAGGATAAAACCATTGAGTTGGATATGGAAGCAGAGTTTTCAAGTTTGGCTCTTGATATCATTGGACTTGGTGTTTTCAACTATGATTTTGGTTCTGTAACCAAAGAATCTCCAGTGATTAAGGCTGTATATGGAACTCTTTTTGAAGCAGAGCATAGATCAACTTTCTATATCCCATATTGGAAATTACCTTTAGCGAAGTGGATAGTCCCGAGGCAGCGTAAATTCCATAGTGACCTTAAGGTTATTAACAAGTGTCTTGATGGCCTAATACGAAATGCAAGAGAAACCCGTGAGGAAGCCGATGTCGAGAAATTGCAGCAAAGGGACTACTTAAATCTCAAGGATGCCAGTCTTTTGCGTTTCTTAGTTGATATGCGGGGAGCTGATGTTGATGATCGGCAGCTTAGGGACGATCTGATGACAATGCTTATTGCTGGTCATGAGACAACTGCTGCTGTTCTTACATGGGCTGTTTATTTGCTTGCACAAAATCCTTCAAAAATGAAAAAGGCTCAGGCAGAGATTGATTTGGTTCTTGGCAAGGGGAGCCTAACTTTTGAATCACTTAAAGCATTGAAGTACATCAGACTTATTGTTGCAGAGACTCTTCGTTTGTTTCCCCAGCCACCATTGCTGATAAGACGAGCTCTCAAATCGGATACATTACCAGGAGGATACAATGGTGACAAAAATGGATATACAATTCCTGCAGGGACTGACATATTCATCTCTGTTTACAATCTCCACAGATCTCCATACTTCTGGGATAATCCTCAAGAATTTGAACCAGAGAGATTTCAGGTAAAGAAACCAAGCGAGGGAATTGAAGGATGGGATGGTTTTGACCCATCTAGAAGCCCTGGAGCTCTATACCCGAACGAGATTGTAGCAGACTTTTCCTTCTTACCATTTGGTGGAGGCCCTAGAAAATGTGTGGGAGATCAGTTTGCTCTAATGGAGTCAACTATAGCATTGGCGATGTTGCTGCAGAAGTTTGATGTGGAACTAAAAGGAGGTCCAGAATCTGTAGAACTTGTTACTGGGGCCACTATTCACACCAAAAATGGGTTGTGGTGCAAACTGAGAAGAAGATCACAAGTAAATTGA | 1776 | 42.91 | MGVAMAATSLSNLPSAVFHGNLQRNEFGFVGMARQPSVCSATTATAKFRKSNLRGSVVRCQSARTDEPKTKRNLLDNASNLLTNLLSGGNLGSMPIAEGAVSDLFGRPLFFALYDWFLEHGSVYKLAFGPKAFVVVSDPIVARYVLRENAFGYDKGVLADILEPIMGKGLIPADLDTWKQRRRVIAPGFHALYLEAMTKVFTDCSERSMLKLEKLLGEGERAEDKTIELDMEAEFSSLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKLPLAKWIVPRQRKFHSDLKVINKCLDGLIRNARETREEADVEKLQQRDYLNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVYLLAQNPSKMKKAQAEIDLVLGKGSLTFESLKALKYIRLIVAETLRLFPQPPLLIRRALKSDTLPGGYNGDKNGYTIPAGTDIFISVYNLHRSPYFWDNPQEFEPERFQVKKPSEGIEGWDGFDPSRSPGALYPNEIVADFSFLPFGGGPRKCVGDQFALMESTIALAMLLQKFDVELKGGPESVELVTGATIHTKNGLWCKLRRRSQVN | 591 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 6819679 | 6828759 | + | MC10g0808 | Mch10g0959 | 678052 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch10g0959 | 591 | SUPERFAMILY | Cytochrome P450 | 105 | 587 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch10g0959 | 591 | PRINTS | P450 superfamily signature | 420 | 431 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch10g0959 | 591 | PRINTS | P450 superfamily signature | 368 | 385 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch10g0959 | 591 | PRINTS | P450 superfamily signature | 525 | 534 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch10g0959 | 591 | PRINTS | P450 superfamily signature | 534 | 545 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch10g0959 | 591 | PANTHER | CYTOCHROME P450 FAMILY 4 | 83 | 587 | IPR050196 | GO:0009507(PANTHER) | |
| Mch10g0959 | 591 | CDD | CYP97 | 111 | 581 | - | - | |
| Mch10g0959 | 591 | Pfam | Cytochrome P450 | 117 | 579 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch10g0959 | 591 | PRINTS | E-class P450 group I signature | 117 | 136 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch10g0959 | 591 | PRINTS | E-class P450 group I signature | 377 | 403 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch10g0959 | 591 | PRINTS | E-class P450 group I signature | 357 | 374 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch10g0959 | 591 | PRINTS | E-class P450 group I signature | 534 | 557 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch10g0959 | 591 | PRINTS | E-class P450 group I signature | 524 | 534 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch10g0959 | 591 | Gene3D | Cytochrome P450 | 93 | 591 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch10g0959 | 591 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 527 | 536 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch10g0959 | Mch-Chr10:6819679 | Mch1g0879 | Mch-Chr1:12161655 | 8.64E-124 | dispersed | |
| Mch10g0959 | Mch-Chr10:6819679 | Mch4g2441 | Mch-Chr4:25354349 | 1.63E-32 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch10g0959 | K24543 | - | csv:101210292 | 1034.25 |