Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0967 ATGCTTCGGAGCTTACTCCCTCAATCTCCCATCAATTCCGCTTCCAATTCCCCCAATAATTCCATGAAGACCAAGCGCCCCGCCGACGGGGACCCCTCCCCCGACGATCCTTCCCCCAAGAGGCTCAATCCCGGCGCCACAGTGGAAGCCGAGGCCGAGGCCGAGGCGGAGGAGGAGGAGCCGCCGGTCCTCGACGGGAGCGAGTCGACTGGCTTGAGGCTCCTGGGGCTTCTCCTGCAATGCGCCGAGTGCGTCGCCATGGATAATTTGCAGGAGGCCAACGATCTCTTGCCGGAGATCTCCGAGCTCTCTTCGCCGTTCGGGACGTCGCCGGAGCGCGTCGGCGCGTACTTCGCCCACGCGCTTCAGGCCAGAGTGATAAGCTCCTGCTTGGGAACCTACTCGCCTCTGACGATCAGAACGCTGAATCAAACTCAGTCGCAGAGAATCTTCAATGCTCTGCAATCCTACAATTCCATCAGTCCGTTGATCAAGTTCTCGCACTTCACTGCCAATCAAGCCATCTTCCAAGCCTTGGACGGCGAAGATCGAGTCCACGTTATCGATCTCGACGTAATGCAGGGCCTCCAGTGGCCCGGATTGTTCCACATCCTCGCCTCCCGCCCGAAGAAGATCCAATCTCTGCGAATCTCCGGCTTCGGATCCTCCTCCGATCTGCTCCACTCCACCGGCCGCCGCCTCGCCGATTTCGCGACCTCTCTCGGCCTCCCGTTCGAGTTCCATCCGGTGGAGGGGAAAATCGGAAACCTAATGGACCCGAACCAGCTCGAATTGAGGCCCGGCGAGGCTCTGGTAGTGCACTGGATGCACCATTGCCTCTACGACATAACAGGTAGCGATTTAGGGACGCTGAGATTGCTTTCTTCCCTAAAACCTAAACTGATCACAATCGTCGAGCAGGATCTGAGCCATGGGGGCAGTTTTCTAGGAAGATTCGTGGAGGCTCTGCATTATTACAGCGCGTTGTTCGATGCGCTCGGAGATAGCCTGGCCGTGGATAGCCTGGAGAGGCACGTGGTGGAGCAGCAGCTGTTCGGGTGCGAGATCAGGAACATCGTCGCCGTCGGCGGCCCCAAGAGAACCGGAGAAGTGAAGGTGGAGCAGTGGGGCGACGAACTCAAACGGGTCGGGTTCCGGCCCGTCTCTCTCGGGGGAAACCCAGCTGCCCAGGCGAGTTTGCTCCTCGGAATGTTCCCATGGAAAGGGTATACGCTAGTTGAGGAAAATGGGAGCCTCAAATTGGGATGGAAGGACCTCTCTCTGCTCACAGCCTCCGCCTGGCAACCCTCCGAT 1314 58.9 MLRSLLPQSPINSASNSPNNSMKTKRPADGDPSPDDPSPKRLNPGATVEAEAEAEAEEEEPPVLDGSESTGLRLLGLLLQCAECVAMDNLQEANDLLPEISELSSPFGTSPERVGAYFAHALQARVISSCLGTYSPLTIRTLNQTQSQRIFNALQSYNSISPLIKFSHFTANQAIFQALDGEDRVHVIDLDVMQGLQWPGLFHILASRPKKIQSLRISGFGSSSDLLHSTGRRLADFATSLGLPFEFHPVEGKIGNLMDPNQLELRPGEALVVHWMHHCLYDITGSDLGTLRLLSSLKPKLITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDSLAVDSLERHVVEQQLFGCEIRNIVAVGGPKRTGEVKVEQWGDELKRVGFRPVSLGGNPAAQASLLLGMFPWKGYTLVEENGSLKLGWKDLSLLTASAWQPSD 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6898036 6899349 - MC10g0815 Mch10g0967 678060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0967 438 ProSiteProfiles GRAS family profile. 65 435 IPR005202 -
Mch10g0967 438 MobiDBLite consensus disorder prediction 1 26 - -
Mch10g0967 438 MobiDBLite consensus disorder prediction 1 68 - -
Mch10g0967 438 Pfam GRAS domain family 76 435 IPR005202 -
Mch10g0967 438 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 55 434 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)|GO:0048366(PANTHER)|GO:0090610(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0967 Mch-Chr10:6898036 Mch1g0582 Mch-Chr1:10016607 6.12E-160 dispersed
Mch10g0967 Mch-Chr10:6898036 Mch5g1847 Mch-Chr5:18703155 2.59E-43 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42489 PF03514 GRAS 9.80E-117 CL0063 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0967 K27742 - csv:101212169 724.161