Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0978 GTTGGGGAGAAGATGAAGAAGATGAAGTTGGTTTTGTTGATTGCAGTTCCAACAATGGTGGTTCTGATATCGCAGAGATTATGGATGCCATCTCTGAACTTTGATCACCTCTCCACAACTGTTTCTCAACATGGCTCCAAAAACGACGACAGATTCATCAATGGTCTTCTTCCTCCTGGCTTCCCGGAGAAATCCTGCTTAAGCCGCTACCGGCTGAATCTCTTCCGGAAACCCTCCCCCCATAAGCCCTCTTCCGCTCTCCTCTCGAAGCTCCGCCGCTACGAAGCCCTCCACCGCCGCTGCGGCCCTGATTCCCCCTCCTTCCACCGGAACCTCGCCGCTCTCGCCTCACCGCCCACGAACTCCACAGCCCCGCCGGACGACTGCAAATACGCCGTCCTCTTGAGCCGCGACGGCCTCGGCAACCGGATGATCGCCATAATCTCCGCCTTCTTCTACGCCCTAATCTCCGACCGCGTCCTTCTCATCGACCGCGGCAACTCCCTCGATGATCTCTTCTGCGAGCCCTTTCTCGGATCCTCATGGCTTCTCCCGCACGATTTCCCTCTCCGCCGCGAATTCGGATCCTTCCGGCAGTCCTTCTCGAGGTCATTGGGCAACATTTTGAGAACCGGTGGAATGTTAAAGAAAACAATCGAAGATTCGCCTCCGCCGTATTTGTACCTCCATCTCTCTCACGACGCCAGCGATTACGATAAGCTCTTTTACTGCGATCGACAGCAGAATCTTCTGAAGAAGCTCCCATGGCTTGTAATGGAGACCAACAACTACCTGATTCCGGGAATCTTTCTGGTTCCTTCTTTCAGAGAGGAGCTCAACAAGCTCTTTCCGGCGAAGGACACCGTGTTCCACCACCTCGGTCGGTTCCTCTTCCACCCGACGAACGCCGTCTGGGGGCTGATTTCGAGATCTTACAAACCCTATCTCGCCAGAGCAAACGAGATGGTCGGGATTCAGATCCGGATTTTCGGGTCGGAATCCGGATCCGTCCAAGACCATATGAATCAGCTTCTGGCTTGTACACAGAAGAAGAAATTGCTGCCAGAGGTGGAACCGTCGTCCTCGTCGTCGCCGGAGAAGACGAATAACACCGCCGATTCGAGGAATCAGAAGGTGAAAGTCGTGCTGGTGACGTCCCTGAGCTCGCAGTACTCGGAAACCCTAAAGGACATCTACTGGGAGCATCCGGCCGTGGACGGCGAGGTGGTGGCGGTGTACCAGCCGAGCCACGAGGGGATTCAGAGCTCCGACAAGGAGGCGCACAACCGGAAGGCGCTGGCGGAGATGTACCTTCTGAGCTTGAGCGACGTGCTGGTGACGAGCGATTGGTCGACGTTTGGGTATGTGGCGCAGGGGTTGGCCGGAGTGAGGCCATGGATGCTGTACAAGGCGGAGGAGAAGGTGTTCTGGCCGATGCCGCCGTGGCTGAAGTACAGAACGAGAAACGAGACGGCCGGCGAGTGGCCGTGCCGGCGGGCGGTGTCGATGGAGCCGTGCTTCCACACGCCGCCGGTGTGCGATTGCGATGAGATGAAGAGAAGCGACAGAGGGAATGTTTCGCCGTTCGTCAGGCATTGTGAGGATATGAGTTGGGGCCTCAAGTTG 1626 56.58 VGEKMKKMKLVLLIAVPTMVVLISQRLWMPSLNFDHLSTTVSQHGSKNDDRFINGLLPPGFPEKSCLSRYRLNLFRKPSPHKPSSALLSKLRRYEALHRRCGPDSPSFHRNLAALASPPTNSTAPPDDCKYAVLLSRDGLGNRMIAIISAFFYALISDRVLLIDRGNSLDDLFCEPFLGSSWLLPHDFPLRREFGSFRQSFSRSLGNILRTGGMLKKTIEDSPPPYLYLHLSHDASDYDKLFYCDRQQNLLKKLPWLVMETNNYLIPGIFLVPSFREELNKLFPAKDTVFHHLGRFLFHPTNAVWGLISRSYKPYLARANEMVGIQIRIFGSESGSVQDHMNQLLACTQKKKLLPEVEPSSSSSPEKTNNTADSRNQKVKVVLVTSLSSQYSETLKDIYWEHPAVDGEVVAVYQPSHEGIQSSDKEAHNRKALAEMYLLSLSDVLVTSDWSTFGYVAQGLAGVRPWMLYKAEEKVFWPMPPWLKYRTRNETAGEWPCRRAVSMEPCFHTPPVCDCDEMKRSDRGNVSPFVRHCEDMSWGLKL 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6995349 6997534 + MC10g0826 Mch10g0978 678071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0978 542 MobiDBLite consensus disorder prediction 355 375 - -
Mch10g0978 542 FunFam Galactoside 2-alpha-L-fucosyltransferase 127 178 - -
Mch10g0978 542 Pfam Xyloglucan fucosyltransferase 40 515 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
Mch10g0978 542 Gene3D - 127 175 - -
Mch10g0978 542 Gene3D - 309 472 - -
Mch10g0978 542 PANTHER FUCOSYLTRANSFERASE 2-RELATED 4 542 IPR004938 GO:0005794(PANTHER)|GO:0008107(InterPro)|GO:0008417(PANTHER)|GO:0009969(PANTHER)|GO:0016020(InterPro)|GO:0042546(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0978 Mch-Chr10:6995349 Mch9g2109 Mch-Chr9:22017429 7.46E-188 dispersed
Mch10g0978 Mch-Chr10:6995349 Mch10g0980 Mch-Chr10:7002020 1.23E-258 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0978 K13681 - csv:101222105 831.632