Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0980 AATTCTAACAAATTCATCCATGGTCTTCTTCCTCCTGGTTTCGACGAAAAATCCTGCTTAAGCCGCTACAATTTCAACCTCTACCGGAAAAAACCCTCCCCCTACAAGCCTTCTTCCGCCCTCCTCTCAAAGCTCCGCCGCTACGAAGCCCTCCACCGCCGCTGCGGCCCCAATTCCCCCTCCTTCCGCGGCGCCCTCGCCTACTCCAACTCCACGCCCTCGCCGGACGACCGCTGCAAATACGCCGTCGTTTTAACCCGAGATGGCCTCGGCAACCGGATTCTCACCATCGCCTCTGCTTTCTTGTACGCCCTCATCTCCGATCGCGTCCTTCTCATCGACCGGGGCAACGCACTCGACGATCTCTTCTGTGAGCCCTTCCTCGGATCCTCGTGGATTCTGCCCCCCGATTTCCCTCTCCGCCGCCGCGAAATCGGCCACATTTTGAGGAATAATGGAGATTTGCCCTACTTCTACCTCCAGCTTTCTCACGAGGCCACTGGTCTCGACAATCTCTTCTACTGCGACCGCCAGCAAGCTCTCATCAGCGACTTCCCATGGCTGATCATGGAGACCAATAACTACCTGGTGCCCAAAATCTTCACGGTTCCTTCTTTCAGAGCAGAGCTTCACGAACTGTTTCCGGCGAAGGACACCGTGTTCCACCATCTCGGCCGGTACCTCTTCCACCCGAGGAACGCCGTGTGGGGGCTGATTTCGAGATCCTACGAGTCGTATCTCGCCAGAGCGAACGGGATGGTTGGGATTCAGATCCGGGTTTTCGGGTCGGAATCCGGGTCGTCGCGGGATCTGACGAATCAGCTTCTGGCCTGCGCGCAGAAGGAGAAATTGCTGCCGGAGGTGTCGTCGTCGTCACCAGAGAAGACTAATTTCACCGCCGATTTGAGGGATCGGAAGTTGAAAGTGGTGCTGGTGGCGTCTCTGAGATCTGAGTTCTCGGAAGCCCTAAAGGACGTTTACTGGGAGCATCCGACGACGGACGGGGAAATGGTGGCGGTGTACCAGCCGAGCCGTGAGAGGATTCAGATGTCGGACAAGGCGGCGCACAACCGGAAGGCGGTGGCGGAGATGTACCTTCTGAGCTTGAGCGACGCGCTGGTGACGAGCTACTGGTCGACGTTTGGGTATGTGGCGCAGGGGCTGGCCGGAGTGAAGCCGTGGATGCTGTACAAGGCGGAGGAGAAGGTGTATTGGGAGTTGCATCCGTGGCTGAAGAAGTACAGAACGAGGAACGATACGGGCGGCGACTGGCCGTGCCGGCGGGCGGTGTCGATGGAGCCTTGCTTCCACGCGCCGCCGTTGAGTGATTGCGAAGGGATGGACACGCGGGAACAGGATGGAGGGAATGATTTTCCGTTTGTGACGCATTGTGAGGATCAGAGTTGGGGTATCAAGTTG 1419 57.79 NSNKFIHGLLPPGFDEKSCLSRYNFNLYRKKPSPYKPSSALLSKLRRYEALHRRCGPNSPSFRGALAYSNSTPSPDDRCKYAVVLTRDGLGNRILTIASAFLYALISDRVLLIDRGNALDDLFCEPFLGSSWILPPDFPLRRREIGHILRNNGDLPYFYLQLSHEATGLDNLFYCDRQQALISDFPWLIMETNNYLVPKIFTVPSFRAELHELFPAKDTVFHHLGRYLFHPRNAVWGLISRSYESYLARANGMVGIQIRVFGSESGSSRDLTNQLLACAQKEKLLPEVSSSSPEKTNFTADLRDRKLKVVLVASLRSEFSEALKDVYWEHPTTDGEMVAVYQPSRERIQMSDKAAHNRKAVAEMYLLSLSDALVTSYWSTFGYVAQGLAGVKPWMLYKAEEKVYWELHPWLKKYRTRNDTGGDWPCRRAVSMEPCFHAPPLSDCEGMDTREQDGGNDFPFVTHCEDQSWGIKL 473
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7002020 7003438 + MC10g0828 Mch10g0980 678073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0980 473 PANTHER FUCOSYLTRANSFERASE 2-RELATED 3 473 IPR004938 GO:0005794(PANTHER)|GO:0008107(InterPro)|GO:0008417(PANTHER)|GO:0009969(PANTHER)|GO:0016020(InterPro)|GO:0042546(InterPro)
Mch10g0980 473 Pfam Xyloglucan fucosyltransferase 156 444 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
Mch10g0980 473 Pfam Xyloglucan fucosyltransferase 3 142 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
Mch10g0980 473 FunFam Galactoside 2-alpha-L-fucosyltransferase 77 128 - -
Mch10g0980 473 Gene3D - 77 125 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0980 Mch-Chr10:7002020 Mch9g2109 Mch-Chr9:22017429 7.38E-167 dispersed
Mch10g0978 Mch-Chr10:6995349 Mch10g0980 Mch-Chr10:7002020 1.23E-258 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0980 K13681 - csv:101222105 672.159