Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g1004 ATGTATGGGTGTGTTTCACAAAAAAAAAAAAAAAAGAAAAAAGAAAAAAAAAGGATTGGGGGAACTATCGAAACTTGTAGCAAACAAGTTTTTTTTTTCTTTTCCTTTTTCTTGGCCATTTTTGTTTTGCTTTTTCCTCCCTCAATCTCTCAAACTCTCTATAATCCTCCCCCTTTCTATAAAACGGGGTCGAATCCCGATCCCTCAACGTATACCTTTCACATCTTTTATTTTCTTCGTCCCCAAAAAAATCTCTCCCCGGCGGCGATTTCCATTCCCATTTTCCAGTTTTCTTTGGAGTTCTCAGCAATGGCGGACGGGGAAGTGAAGCTTTTGGATTTCTGGCCCAGCATGTTCGGGATGCGGGTTAGAATAGCGCTGGCCGAGAAGGGCGTCGCCTACGAGTACGTGGACGAAGATTTGGCCAATAAGAGCCCTCTGCTTCTGCAGATGAACCCCATTCACAAGAAGATCCCTGTTCTCGTCCATAATGGAAAACCCATCTGCGAATCCTCCATTATTGTCGAGTATATTGATGAAGTGTGGAACCATAAGGCGCCTATTTTGCCCTCCGATCCTTACGAGAGGGCTCAGGCCAGATTCTGGGTGGATTACATCGACAAGAAGCTCTATGAGCCTACGAGGAAGATATGGGCCTCCAAGGGAGAGGAGCAAGACGCAGGGGAGAAGGAGTTCATAGGAATTTTGAAGCAACTGGAGGAAGTTCTCGGGGAGAAGACCTACTTTGGAGGTGAGCGTTTGGGATTTGTGGACATATCTCTGATAGGATTCTACACATGGTTTGATGCCTATGAATCCTTTGGGAACTTCAGCATCGAGGCTGAGTGTCCCAAGCTAATGGAAGAGTTGGTTCTATTGGACATGTGGGTGAGCCCTTTTGCAATAAGGGTGAGGGTGGCATTGGCTGAGAAAGGAATAGAATATGAGCCAAAACAGGAAGATTTGAGCAACAAAAGCACTTTGCTTTTGGAGATGAACCCTCTCAACAAGCAAATCCCAGTGCTGATTCACAAAGGGAAACCCATTATTGAGTCTCTTGTTATAGTTCAATATATTGACGAGGTTTGGAGTAGTGAGGAGGGAGCTTATAACAATGCCAATTTCCTTCCTTCTCATCCTTTCCAGAGAGCACATGCTAGGTTTTGGGCTGACTATGTGGACAAGAAGATCTATCCGATTGGAAGTAAGCTGTGGAATAGAGAGAAGACAGAAGAGGAGAAAGAGGCAGCAACAAAGGAACTTTTGGAGTGCTTTAAACAACTAGAGGAAGAGCTTGGAGAAAAGCCCTATTTTGGGGGTGAAATTTTTGGGCTTGTAGATATTGCTCTCATTCCATTTTACAGCATGTTTCTTGCATTCAAAATTCTTGGAAAATTGAAATTAGAAACTGAGTGTCCCAACATCTTCCAATGGGCTCAGAGGTGCACCCAAAGAGAGAGTGTCTCAAAGAATTTGCCTTCTCAACAAGTGGTTTACGATGTCGTTTTGAAGATCCTAGGAATTCAAACTCGAGTAATTTAA 1542 43.64 MYGCVSQKKKKKKKEKKRIGGTIETCSKQVFFFFSFFLAIFVLLFPPSISQTLYNPPPFYKTGSNPDPSTYTFHIFYFLRPQKNLSPAAISIPIFQFSLEFSAMADGEVKLLDFWPSMFGMRVRIALAEKGVAYEYVDEDLANKSPLLLQMNPIHKKIPVLVHNGKPICESSIIVEYIDEVWNHKAPILPSDPYERAQARFWVDYIDKKLYEPTRKIWASKGEEQDAGEKEFIGILKQLEEVLGEKTYFGGERLGFVDISLIGFYTWFDAYESFGNFSIEAECPKLMEELVLLDMWVSPFAIRVRVALAEKGIEYEPKQEDLSNKSTLLLEMNPLNKQIPVLIHKGKPIIESLVIVQYIDEVWSSEEGAYNNANFLPSHPFQRAHARFWADYVDKKIYPIGSKLWNREKTEEEKEAATKELLECFKQLEEELGEKPYFGGEIFGLVDIALIPFYSMFLAFKILGKLKLETECPNIFQWAQRCTQRESVSKNLPSQQVVYDVVLKILGIQTRVI 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7190097 7200945 - MC10g0851 Mch10g1004 678097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g1004 513 Gene3D Glutaredoxin 104 191 - -
Mch10g1004 513 Gene3D Glutaredoxin 289 371 - -
Mch10g1004 513 SUPERFAMILY Thioredoxin-like 109 211 IPR036249 -
Mch10g1004 513 SUPERFAMILY GST C-terminal domain-like 370 505 IPR036282 -
Mch10g1004 513 CDD GST_C_Tau 193 288 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Mch10g1004 513 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 288 367 IPR004045 -
Mch10g1004 513 CDD GST_N_Tau 290 363 - -
Mch10g1004 513 Pfam Glutathione S-transferase, C-terminal domain 225 287 - -
Mch10g1004 513 Pfam Glutathione S-transferase, C-terminal domain 398 486 IPR004046 -
Mch10g1004 513 SFLD Main (cytGST) 287 502 - -
Mch10g1004 513 SFLD Main (cytGST) 105 287 - -
Mch10g1004 513 Pfam Glutathione S-transferase, N-terminal domain 108 180 IPR004045 -
Mch10g1004 513 Pfam Glutathione S-transferase, N-terminal domain 290 361 IPR004045 -
Mch10g1004 513 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 379 501 IPR010987 -
Mch10g1004 513 FunFam Tau class glutathione S-transferase 104 191 - -
Mch10g1004 513 Gene3D - 379 509 - -
Mch10g1004 513 FunFam Tau class glutathione S-transferase 285 371 - -
Mch10g1004 513 SUPERFAMILY GST C-terminal domain-like 180 287 IPR036282 -
Mch10g1004 513 Gene3D - 192 288 - -
Mch10g1004 513 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 192 321 IPR010987 -
Mch10g1004 513 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 107 186 IPR004045 -
Mch10g1004 513 SFLD Main.3: Omega- and Tau-like 105 287 IPR045073 -
Mch10g1004 513 SFLD Main.3: Omega- and Tau-like 287 502 IPR045073 -
Mch10g1004 513 CDD GST_N_Tau 109 182 - -
Mch10g1004 513 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 108 288 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Mch10g1004 513 Coils Coil 407 427 - -
Mch10g1004 513 CDD GST_C_Tau 380 505 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Mch10g1004 513 SUPERFAMILY Thioredoxin-like 290 398 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1004 Mch-Chr10:7190097 Mch1g0660 Mch-Chr1:10682293 3.24E-87 dispersed
Mch10g1004 Mch-Chr10:7190097 Mch10g1005 Mch-Chr10:7210860 1.52E-136 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g1004 K00799 - csv:101218562 327.405