Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g1005 ATTTCCATTCCCATTTTCCAGTTTTCTTTCGAGTTCTCAGCAATGGCGGACGGGGAAGTGAAGCTTTTGGATTTCTGGCCCAGCATGTTCGGGATGCGGGTTAGAATAGCGCTGGCCGAGAAGGGCGTCGCCTACGAGTACGTGGACGAAGATTTGGCCAATAAGAGCCCTCTGCTTCTGCAGATGAACCCCATTCACAAGAAGATCCCTGTTCTCGTCCATAATGGAAAACCCATCTGCGAATCCTCTATTATTGTCGAGTATATTGATGAAGTGTGGAACCATAAGGCGCCTATTTTGCCCTCCGATCCTTACGAGAGGGCTCAGGCCAGATTCTGGGTGGATTACATCGACAAGAAGCTCTATGAGCCTACGAGGAAGATATGGGGCTCCAAGGGAGAGGAGCAAGAAGCAGGGAAGAAGGAGTTCATAGGAATTTTGAAGCAAATGGAGGAAGTTCTCGGGGAGAAAGCCTACTTTGGAGGTGAGCGTTTGGGATTTGTGGACATTTCTCTGATTGGATTCTGCACATGGTTTGATGTCTATGAATCCTTTGGGAACTTCAGCATTGAGGCTGAGTGTCCCAAGCTAATGGGTTGGGTTAAGAGATGCCTGCAAAATGAGAGTGTTTCAAAGACCCTGCCTGATCCCAAGAAGGTCCATGACTTTGTGCTTCAATGGAAGAAAAAATTAGGCCTC 699 47.93 ISIPIFQFSFEFSAMADGEVKLLDFWPSMFGMRVRIALAEKGVAYEYVDEDLANKSPLLLQMNPIHKKIPVLVHNGKPICESSIIVEYIDEVWNHKAPILPSDPYERAQARFWVDYIDKKLYEPTRKIWGSKGEEQEAGKKEFIGILKQMEEVLGEKAYFGGERLGFVDISLIGFCTWFDVYESFGNFSIEAECPKLMGWVKRCLQNESVSKTLPDPKKVHDFVLQWKKKLGL 233
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7210860 7212336 - MC10g0852 Mch10g1005 678098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g1005 233 CDD GST_C_Tau 104 226 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Mch10g1005 233 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 103 231 IPR010987 -
Mch10g1005 233 SUPERFAMILY GST C-terminal domain-like 91 230 IPR036282 -
Mch10g1005 233 CDD GST_N_Tau 20 93 - -
Mch10g1005 233 SFLD Main.3: Omega- and Tau-like 16 231 IPR045073 -
Mch10g1005 233 Gene3D - 103 233 - -
Mch10g1005 233 SFLD Main (cytGST) 16 231 - -
Mch10g1005 233 Pfam Glutathione S-transferase, C-terminal domain 136 203 - -
Mch10g1005 233 FunFam Tau class glutathione S-transferase 15 102 - -
Mch10g1005 233 Gene3D Glutaredoxin 15 102 - -
Mch10g1005 233 FunFam Glutathione S-transferase U20 103 233 - -
Mch10g1005 233 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 18 97 IPR004045 -
Mch10g1005 233 SUPERFAMILY Thioredoxin-like 20 122 IPR036249 -
Mch10g1005 233 Pfam Glutathione S-transferase, N-terminal domain 19 91 IPR004045 -
Mch10g1005 233 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 19 224 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1005 Mch-Chr10:7210860 Mch4g1663 Mch-Chr4:19818072 6.32E-86 dispersed
Mch10g1004 Mch-Chr10:7190097 Mch10g1005 Mch-Chr10:7210860 1.52E-136 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g1005 K00799 - csv:101218562 374.015