Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch10g1025 | ATGCCGCAAGATCATCCAAGGAAGGAGGCCAGGGAAATAAACTTTTTTACTGAATACGGGGATGCTAATAGATACAAGATTCTTGAAGTTATTGGAAAAGGAAGTTATGGAGTTGTCTGTGCTGCTCTTGACATGCAAACTGGGCAGAAAGTTGCAATAAAGAGGATTCATGATATTTTTGATCACATATCTGATGCTATTCGAATTCTCCGTGAAGTTAAGTTGCTTAGATTGTTACGGCATCCTGATATAGTTGAGATCAAACACATTATGTTGCCACCTTCTAAAAGAGAATTTAAAGACATTTATGTGGTTTTTGAGCTACTGGAATCTGATCTTCATCAAGTTATTAAAGCAAATGATGACTTGACCCGTGAACATCATCAGTTCTTTCTTTATCAGATGCTACGTGCATTGAAATTTATGCATGCAGCAAATGTATATCATAGAGATTTAAAGCCGAAGAATATATTGGCCAATGCCAATTGCAAGCTTAAAATCTGTGATTTTGGACTTGCGAGAGTTGCTTTCAGTGACGTCCCAACTACAATATTTTGGACAGACTATGTTGCTACTAGATGGTACAGAGCTCCGGAGCTGTGTGGATCATTTTGTTCCAAGTATACTCCCGCGATAGATATTTGGAGCATTGGATGTATATTTGCTGAAGTGTTGACGGGGAAGCCATTGTTTCCTGGTAAAAGCGTCGCCCATCAGTTGGATTTGATTACTGATCTTCTCGGGACTCCCTCATTGGAAACCATTGCAGGAGTTCGGAACGAAAAGGCTAGGAAATATTTGACAGAAATGAGAAAGAAACCTGCAGTTCCATTTTCACAAAGATTTTCCAATGCGGATCCTACAGCCATCCGTTTATTGCAAAGGCTATTAGCTTTTGATCCAAAGGATCGACCATCGGCTGTGGAGGCTTTGGCTGATCCTTACTTTAAGGGCCTAGCCAAAGTTGAAAGAGAGCCATCTTGTCAGCCAATCTCAAGATCGGAATTCGAGTTTGAGAGACGGAAATTAACAAAGGATGATGTAAGGGAACTATTATACAGAGAAATATTAGAATACCATCCTCAAATTCGTGAAGATTATTTGATTGGAGAGACTACCAAGCTCCTCTATCCCAGTGTTACTAGTCAGTTCAAAAACCAATTCACCTACCACAAGGAGAATGGTGGTAAAAGCGCACCTGTTTTGCCTCTCGAACGGAAACACTTCTCCCTCCCACGGTCTACTGTTTGCACAAACTTGGTTTCACCTGACCGTGAGCCGGTTCGACGAAATCCCAAAGTCCCAAACAATAGTATGGGATTACCTGATAGAAAATTTGGGAATCCATCAAAGGCTCATCATCCTCCACCCAAAGTGCCCACTGGACGAGTTTCTGGGCCGATCCTCCCGTACGAGAACAGAAACATAAAAGACGTTTACTCGAGACTAACGTCGCAAATTAGAAGTTTGGATTTGTGA | 1479 | 41.31 | MPQDHPRKEAREINFFTEYGDANRYKILEVIGKGSYGVVCAALDMQTGQKVAIKRIHDIFDHISDAIRILREVKLLRLLRHPDIVEIKHIMLPPSKREFKDIYVVFELLESDLHQVIKANDDLTREHHQFFLYQMLRALKFMHAANVYHRDLKPKNILANANCKLKICDFGLARVAFSDVPTTIFWTDYVATRWYRAPELCGSFCSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVAHQLDLITDLLGTPSLETIAGVRNEKARKYLTEMRKKPAVPFSQRFSNADPTAIRLLQRLLAFDPKDRPSAVEALADPYFKGLAKVEREPSCQPISRSEFEFERRKLTKDDVRELLYREILEYHPQIREDYLIGETTKLLYPSVTSQFKNQFTYHKENGGKSAPVLPLERKHFSLPRSTVCTNLVSPDREPVRRNPKVPNNSMGLPDRKFGNPSKAHHPPPKVPTGRVSGPILPYENRNIKDVYSRLTSQIRSLDL | 492 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 7448586 | 7453428 | - | MC10g0872 | Mch10g1025 | 678118 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch10g1025 | 492 | ProSiteProfiles | Protein kinase domain profile. | 25 | 316 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch10g1025 | 492 | FunFam | Mitogen-activated protein kinase | 14 | 119 | - | - | |
Mch10g1025 | 492 | MobiDBLite | consensus disorder prediction | 422 | 469 | - | - | |
Mch10g1025 | 492 | Gene3D | Transferase(Phosphotransferase) domain 1 | 111 | 339 | - | - | |
Mch10g1025 | 492 | Gene3D | Phosphorylase Kinase; domain 1 | 40 | 362 | - | - | |
Mch10g1025 | 492 | SMART | serkin_6 | 25 | 316 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch10g1025 | 492 | FunFam | Mitogen-activated protein kinase | 340 | 362 | - | - | |
Mch10g1025 | 492 | Coils | Coil | 106 | 126 | - | - | |
Mch10g1025 | 492 | FunFam | Mitogen-activated protein kinase | 111 | 339 | - | - | |
Mch10g1025 | 492 | Pfam | Protein kinase domain | 25 | 316 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch10g1025 | 492 | SUPERFAMILY | Protein kinase-like (PK-like) | 20 | 320 | IPR011009 | - | |
Mch10g1025 | 492 | ProSitePatterns | MAP kinase signature. | 60 | 163 | IPR003527 | GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch10g1025 | 492 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 22 | 357 | IPR050117 | GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER) | |
Mch10g1025 | 492 | CDD | STKc_TDY_MAPK | 24 | 361 | - | - | |
Mch10g1025 | 492 | ProSitePatterns | Protein kinases ATP-binding region signature. | 31 | 54 | IPR017441 | GO:0005524(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g1025 | Mch-Chr10:7448586 | Mch2g0720 | Mch-Chr2:4907398 | 1.24E-252 | dispersed | |
Mch3g1791 | Mch-Chr3:19105151 | Mch10g1025 | Mch-Chr10:7448586 | 9.60E-28 | transposed | |
Mch10g1025 | Mch-Chr10:7448586 | Mch4g0061 | Mch-Chr4:437982 | 3.82E-252 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77017 | PF00069 | Pkinase | 1.60E-64 | CL0016 | Mch | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch10g1025 | - | - | - | 0.0 |