Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch10g1031 | ATGAAGATTCAGTGCAATGTCTGCGAGGTGGCGGAGGCCACCGTACTGTGTTGTGCCGATGAGGCGGCGTTGTGCTGGGCCTGCGACGAGAAGATTCACGCCGCCAACAAGCTCGCCAGCAAGCACCAGAGAGTTCCTCTCTCTGGTTCTTCGTCTCAGATGCCCAAATGCGACATCTGCCAGGAAGCCAGTGGCTACATCTTCTGTTTAGAGGATCGAGCATTACTTTGCAGGAAGTGTGATGTTGCTATACACACGGCAAATACTTATGTTTCTGCTCATCAGCGCTTTCTGCTTACTGGTGTGAAAGTGGCACTTGAGCCAACTGACCCTGTTGCATGTTCTTCCACGCCTAAGGCAGAATCTAGAGAGAAATCTACTGAGACAAAAGTTGTATCACGATCGTTACCTCAAAGAGAATTCTCCATACCCTCTCCTGGTGAACTCAGCAGGTCCCTGTCTATACCAATTGGATCTGAGGACTTTGTGCCAAATAAGATTTTTCTTTCTGGAGATTCTATTTCTGGTGGCTTTTCACAATGGCATATGGACGAATTTATTAATCTGACTGGATTCAACCAGAGTTATGGGTATATGGATAATGGATCATCCAAGGCTGATAGTGGTAAGCTAGGAGATTCTGATTCACCAGTTTTGAGAGCTGCCGAGGTCGAACTGGACGATGATGATGAGTGCTCAGGCCAGGTTCCAGAGGCTTCCTGGACTGTGCCTCAGATTCCCTCCCCACCCACAGCTTCTGGTTTATACTGGCCAAGAAGTTACCATAATTCTATGGATGGTGCTGTTTTTGTTCCTGACATCTCCGGTTCCTCAGAAAGAGTCCAACATTGCTCACATAACGGTACATTTTCGAAACGCAGGAGGCAGTTCTAG | 894 | 47.76 | MKIQCNVCEVAEATVLCCADEAALCWACDEKIHAANKLASKHQRVPLSGSSSQMPKCDICQEASGYIFCLEDRALLCRKCDVAIHTANTYVSAHQRFLLTGVKVALEPTDPVACSSTPKAESREKSTETKVVSRSLPQREFSIPSPGELSRSLSIPIGSEDFVPNKIFLSGDSISGGFSQWHMDEFINLTGFNQSYGYMDNGSSKADSGKLGDSDSPVLRAAEVELDDDDECSGQVPEASWTVPQIPSPPTASGLYWPRSYHNSMDGAVFVPDISGSSERVQHCSHNGTFSKRRRQF | 297 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 7504337 | 7507701 | + | MC10g0877 | Mch10g1031 | 678124 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch10g1031 | 297 | ProSiteProfiles | Zinc finger B-box type profile. | 1 | 47 | IPR000315 | GO:0008270(InterPro) | |
Mch10g1031 | 297 | CDD | Bbox1_BBX-like | 56 | 99 | IPR049808 | - | |
Mch10g1031 | 297 | Gene3D | Classic Zinc Finger | 1 | 93 | - | - | |
Mch10g1031 | 297 | FunFam | B-box zinc finger protein 22 | 1 | 93 | - | - | |
Mch10g1031 | 297 | MobiDBLite | consensus disorder prediction | 114 | 134 | - | - | |
Mch10g1031 | 297 | SMART | bboxneu5 | 4 | 47 | IPR000315 | GO:0008270(InterPro) | |
Mch10g1031 | 297 | SMART | bboxneu5 | 52 | 99 | IPR000315 | GO:0008270(InterPro) | |
Mch10g1031 | 297 | Pfam | B-box zinc finger | 53 | 94 | IPR000315 | GO:0008270(InterPro) | |
Mch10g1031 | 297 | CDD | Bbox1_BBX-like | 5 | 47 | IPR049808 | - | |
Mch10g1031 | 297 | ProSiteProfiles | Zinc finger B-box type profile. | 52 | 99 | IPR000315 | GO:0008270(InterPro) | |
Mch10g1031 | 297 | PANTHER | B-BOX ZINC FINGER PROTEIN 22 | 1 | 276 | IPR051979 | GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0009640(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g1031 | Mch-Chr10:7504337 | Mch7g0133 | Mch-Chr7:1637820 | 1.45E-41 | dispersed | |
Mch10g1031 | Mch-Chr10:7504337 | Mch8g0821 | Mch-Chr8:5837414 | 6.98E-35 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
42492 | PF00643 | zf-B_box | 8.90E-07 | No_clan | Mch | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch10g1031 | - | - | - | 0.0 |