Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g1037 ATGGATTTTCGGAGTTCTCAATTCAGGATTCTCGGCGTTCTGGTTTTGGGGATTTTGGTGTTCGATGGATTTGGATTTGGATCCGACGCTCAGCTTTTGCCCGAAACTGAAGTGAAAGTCCTTCAAACAATATCTTCAAAACTAAAGAACATAAACTGGAATGTTACTCGGAGTTCTTGCATTCAAGGCGAAGGCTTTTCCAATGGACCGCCGGGAAACCAAATCTTGAGGAATGTCTCATGCAATTGTACTTCCACTGTTTGCCATGTGACAATCATCATACTTAAGGGGCTCGATCTAGCAGGAACTTTTCCAGCTGAATTTGGTAATCTCACTCATCTTCAGGAACTTGATCTTAGTCGCAACTATATTAATGGCCAGCTACCCACAAGTCTTGCCAGTGCTCCTCTCGTCAAACTTTCTCTCTTAGGAAACAGGCTAAGCGGTTCAATTCCCAAGGAAATTGGTGACATTGGCACCCTTGAAGAGCTGGTCTTGGAAGACAACCAGCTTACTGGAAGTCTACCTCCCAGCCTTGGAAATCTGAACCGCTTGCTTAGACTGCTTCTTTCTGCAAACAATTTCACAGGAAAAATACCAGACTCATTCGGAAAATTGAAGAACTTGGTTGATTTAAGGATAGATGGGAGCGGACTGTCTGGGAAGATTCCTGAATTCATTGGGAATTGGATCAACCTTAAGAGACTGGATATTCAAGGAACATTGATGGAAAATCCTATTCCTTCTACAATATCTCAATTGAAAAACCTAACTCAGCTGAGGATATCTGATTTGAAGGGATCATTTATAAGTTTCCCCAATTTGACAGACATGATAAATATGGAAGAACTGGTCCTGAGGAACTGTTTAATCAATGGTTCAATCCCCGAGTATATCGGAGTAATGAATAAATTATCAACTCTAGATCTTAGCTTCAACCATTTAACTGGTCCAATTCCTGAGACATTTCAGAATCTGATGAAGAAGAAGATAGACTTCATGTTCCTGACAAACAACTCACTGAGTGGTGAAGTTCCAGACTGGGTCTTGAATAGCAAAAAGTTCCTAGATTTGTCTTACAACAATTTTACAGGGTCAAATCTAGCTAGTTGCCAACAATCATCTGTGAACATGATAGCCAGTTACGCACCTGCAGCAAATCAACAAGTTCCTTGGTGCCTCAAGAAGGAACTTCCATGCTCAGGAAAAGCTGAACATCATTCCTTGTTTATTAACTGTGGAGGAACCAGATTGGAGGCTGATGGGCATGATTATGAAGAGGACTTAACTAAAGATGGCAAGGCAAGCTTCATTTCTATTTCAGAAAGATGGGCTTATAGCAGTACAGGAGTTTTTCTGGGTGATGAAAATGCTGATTACTTGGCTGCAAATAAGTTTGGCCTGAATGTGAGTGGTCCGGACTATTATCAAAGTGCCCGACTTTCCCCTATCTCTCTCAAATATTACGGTCTTTGCTTGCGGAGCGGGAGCTACAATGTGAAGCTCCACTTTGCTGAAATTATGTACTCTAATGATCAAAAGTTTAACAGCCTGGGAAAGCGTATATTTGATATATCAATTCAAGGAAAACTAGTTAAGAAGGATTTCAATATCGCGGCGGCCGCTGGGGGTGTTGGTAAGAACTTCACGTTGGAAGACAAAAATGTTATTGTCAATGGCAGCACTCTTGAGATTCACCTATATTGGGCTGGTAAAGGAACCACAGCTGTGCCTGACAGAGGAGTTTATGGGCCTCTTATTTCTGCTATCACAGTTACACCAAACTTCAAAGTCGATGAGGGAGGACTGTCCGCTGGAGCACTAGCTGGAATCATAATTTCGTCATGCGCAATAGTCATACTAGTTCTTGTAGCGCTTTGGATCTACATTTGTAAGAAGGACGTCCCAGATAACGAACTTTCTGGTGTGGATTTACAGACGGGCCATTTTACTTTGAAACAAATTAAAGTTGCCACCAATAACTTTGATCCTACAAGTAAAATAGGTGAAGGTGGATTTGGACCAGTCTACAAGGGTGTATTGTCAGATGGGGCTTTGATTGCTGTGAAGCAACTCTCTTCAAAATCAAAGCAAGGGAGCCGTGAGTTTGTCACTGAGATTGGCATGATCTCTGCATTGCAACACCCAAACCTTGTTAAGCTTTATGGCTGCTGTGTTGAGGGAAATCAATTGTTGCTTATATATGAATACATGGAAAACAATAGTCTTGCCCGTGCGCTTTTCGGTCGCGAGGAACAAAGGCTACATCTTGACTGGCCAACAAGGAAGAAGATATGCTTGGAGATAGCTAGGGGATTGGCTTACCTTCACGAAGAATCGAGGTTGAAAATTGTTCATAGAGACATAAAGGCCACGAATGTGCTGCTTGATAAAGATCTTAATGCCAAGATTTCTGACTTCGGTTTGGCTAAGCTTGATGAAGAGGAGAACACCCACATAAGCACCCGAATTGCTGGAACCATAGGTTATATGGCACCTGAGTATGCAATGAGAGGATACTTGACTGATAAGGCAGATGTCTACAGCTTTGGAATAGTTGCCTTGGAGATAGTTAGTGGAAAAAGTAACACAAATTACAGGCCAAAGGAAGATTTTGTCTATCTTCTTGATTGGGCATATGTGCTAGAAGAGCAGGGAAACCTCCTAGAACTCGTAGATCCTGACCTTGGTTCAAATTACTCATCAGAAGAAGCAATGAGGATGTTGAACATAGCTCTCTTATGCACCAACCCATCTCCCACTCTCAGACCAACCATGTCTTCTGTGGTGAGTATGCTTGAAGGTAAGATTGCAGTCCAAGCCCCACTCATCAAGCGCACTTCATTGGGCCAGGATCCGAGGTTTAAAGCCTTTGAGAAACTCTCGCAAGACAGCAGATCGCAGTTTTCAAGCTCGACAGTTTCACGAGATGCTGAGGCTCAAAGAAGCATGTTGATGGACGGGCCGTGTACCGATTCCTCAGCATCAGCATCCTTCCAGAGCAATGGCAAGAATCTCTACCATTCTGCAACGAGCGATCCCCTCGAGAATCAACCCTCAGCTAAGTAG 3069 42.85 MDFRSSQFRILGVLVLGILVFDGFGFGSDAQLLPETEVKVLQTISSKLKNINWNVTRSSCIQGEGFSNGPPGNQILRNVSCNCTSTVCHVTIIILKGLDLAGTFPAEFGNLTHLQELDLSRNYINGQLPTSLASAPLVKLSLLGNRLSGSIPKEIGDIGTLEELVLEDNQLTGSLPPSLGNLNRLLRLLLSANNFTGKIPDSFGKLKNLVDLRIDGSGLSGKIPEFIGNWINLKRLDIQGTLMENPIPSTISQLKNLTQLRISDLKGSFISFPNLTDMINMEELVLRNCLINGSIPEYIGVMNKLSTLDLSFNHLTGPIPETFQNLMKKKIDFMFLTNNSLSGEVPDWVLNSKKFLDLSYNNFTGSNLASCQQSSVNMIASYAPAANQQVPWCLKKELPCSGKAEHHSLFINCGGTRLEADGHDYEEDLTKDGKASFISISERWAYSSTGVFLGDENADYLAANKFGLNVSGPDYYQSARLSPISLKYYGLCLRSGSYNVKLHFAEIMYSNDQKFNSLGKRIFDISIQGKLVKKDFNIAAAAGGVGKNFTLEDKNVIVNGSTLEIHLYWAGKGTTAVPDRGVYGPLISAITVTPNFKVDEGGLSAGALAGIIISSCAIVILVLVALWIYICKKDVPDNELSGVDLQTGHFTLKQIKVATNNFDPTSKIGEGGFGPVYKGVLSDGALIAVKQLSSKSKQGSREFVTEIGMISALQHPNLVKLYGCCVEGNQLLLIYEYMENNSLARALFGREEQRLHLDWPTRKKICLEIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGKSNTNYRPKEDFVYLLDWAYVLEEQGNLLELVDPDLGSNYSSEEAMRMLNIALLCTNPSPTLRPTMSSVVSMLEGKIAVQAPLIKRTSLGQDPRFKAFEKLSQDSRSQFSSSTVSRDAEAQRSMLMDGPCTDSSASASFQSNGKNLYHSATSDPLENQPSAK 1022
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7533418 7546639 + MC10g0882 Mch10g1037 678130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g1037 1022 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 406 595 - -
Mch10g1037 1022 Pfam Leucine Rich Repeat 185 206 IPR001611 GO:0005515(InterPro)
Mch10g1037 1022 Pfam Leucine Rich Repeat 304 326 IPR001611 GO:0005515(InterPro)
Mch10g1037 1022 Pfam Leucine Rich Repeat 161 182 IPR001611 GO:0005515(InterPro)
Mch10g1037 1022 Pfam Leucine Rich Repeat 113 133 IPR001611 GO:0005515(InterPro)
Mch10g1037 1022 Pfam Malectin domain 409 590 IPR021720 -
Mch10g1037 1022 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 631 737 - -
Mch10g1037 1022 Gene3D Phosphorylase Kinase; domain 1 630 737 - -
Mch10g1037 1022 Gene3D Ribonuclease Inhibitor 228 393 IPR032675 -
Mch10g1037 1022 SUPERFAMILY L domain-like 76 326 - -
Mch10g1037 1022 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 273 366 - -
Mch10g1037 1022 CDD STKc_IRAK 668 935 - -
Mch10g1037 1022 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 37 198 - -
Mch10g1037 1022 SUPERFAMILY Protein kinase-like (PK-like) 645 934 IPR011009 -
Mch10g1037 1022 Pfam Protein tyrosine and serine/threonine kinase 666 932 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch10g1037 1022 MobiDBLite consensus disorder prediction 987 1022 - -
Mch10g1037 1022 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch10g1037 1022 SMART serkin_6 662 931 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g1037 1022 Gene3D - 404 595 - -
Mch10g1037 1022 FunFam Putative LRR receptor-like serine/threonine-protein kinase 738 945 - -
Mch10g1037 1022 Gene3D Ribonuclease Inhibitor 37 158 IPR032675 -
Mch10g1037 1022 Gene3D Ribonuclease Inhibitor 159 227 IPR032675 -
Mch10g1037 1022 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 46 959 IPR051824 -
Mch10g1037 1022 ProSiteProfiles Protein kinase domain profile. 662 944 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g1037 1022 MobiDBLite consensus disorder prediction 966 1022 - -
Mch10g1037 1022 Gene3D Transferase(Phosphotransferase) domain 1 738 944 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0989 Mch-Chr10:7067822 Mch10g1037 Mch-Chr10:7533418 5.67E-107 dispersed
Mch10g1037 Mch-Chr10:7533418 Mch11g0992 Mch-Chr11:6867261 0 dispersed
Mch5g1860 Mch-Chr5:18765416 Mch10g1037 Mch-Chr10:7533418 3.32E-70 dispersed
Mch10g1037 Mch-Chr10:7533418 Mch11g0985 Mch-Chr11:6756616 9.25E-285 wgd
Mch10g1037 Mch-Chr10:7533418 Mch4g0077 Mch-Chr4:524273 8.36E-245 wgd
Mch10g1037 Mch-Chr10:7533418 Mch4g0151 Mch-Chr4:1032141 1.99E-63 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77018 PF07714 PK_Tyr_Ser-Thr 1.70E-49 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g1037 - - - 0.0