Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g1039 ATGACGTCGGGGACGAGGCTGCCGACATGGAGGGAGCGGGAAAACAACAAGAGAAGGGAGAGAAGGAGAAGAGCTATTGCGGCGAAGATCTTTGCTGGACTCAGGATGTACGGAAACTACAAGCTTCCCAAGCATTGCGATAACAATGAGGTTCTTAAAGCTCTCTGCAACGAAGCGGGTTGGACCGTGGAACCTGATGGTACCACTTACCGTAAGGGATGCAAGCCAATTGAACGTATGGATGTGGTTGGAGGATCGGCAGCTGCGAGTCCGTATGCATCTCACCAACCTAGTCCTTGTGCTTCCTTCAATCCAAGCCCCGGCTCATCTTCTTTTCCAAGTCCAGCATCATCCTCATATGTTGCTAATCCAAATGCTGATGGCAGTTCACTAATCCCATGGCTCAAAAACCTTTCTTCTTCATCATCTTCAGCATCCTCTTCTAAACTTCCCAATATCTACATTCATGGAGGTTCCATCAGTGCTCCTGTTACTCCTCCTCTGAGTTCCCCAACTGCCAGAACACCCCGACTCAAAGCCGACTGGGAAGATCAGTCTGTCCTGCCAGGATGGAGTGCACAATACTATTCCTCCTTGCCGTCTTCTACTCCACCAAGTCCTGGGCGTCAGATTGTTCCTAATCCAGAATGGTTTGCTGGACTCAGAATTCCTCAGGGTGGACCCAATTCTCCAACATTTAGTCTTGTCTCTACAAACCCATTTGGTTTCAAGGAAGCAGCAATGACTGGTGGAGGATCTCGCATGTGGACCCCTGGTCAAAGTGGGACCTGCTCTCCTGCCATTGCAGCAGGCTCCGATCACACTGCAGATATTCCAATGTCAGAAGTGATTTCTGATGAATTCGCATTTGGAAGCAATGCAGCCGGTATAGTAAAGCCATGGGAAGGGGAACGGATCCATGAAGAATGTGGTTCAGATGAACTAGAGCTCACTCTTGGGAACTCAAGGACCAGGTAA 978 49.39 MTSGTRLPTWRERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPIERMDVVGGSAAASPYASHQPSPCASFNPSPGSSSFPSPASSSYVANPNADGSSLIPWLKNLSSSSSSASSSKLPNIYIHGGSISAPVTPPLSSPTARTPRLKADWEDQSVLPGWSAQYYSSLPSSTPPSPGRQIVPNPEWFAGLRIPQGGPNSPTFSLVSTNPFGFKEAAMTGGGSRMWTPGQSGTCSPAIAAGSDHTADIPMSEVISDEFAFGSNAAGIVKPWEGERIHEECGSDELELTLGNSRTR 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7553712 7557369 - MC10g0884 Mch10g1039 678132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g1039 325 MobiDBLite consensus disorder prediction 88 120 - -
Mch10g1039 325 MobiDBLite consensus disorder prediction 91 120 - -
Mch10g1039 325 MobiDBLite consensus disorder prediction 1 20 - -
Mch10g1039 325 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 325 IPR033264 GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro)
Mch10g1039 325 Pfam BES1/BZR1 plant transcription factor, N-terminal 4 139 IPR008540 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1039 Mch-Chr10:7553712 Mch3g1052 Mch-Chr3:14102456 1.46E-154 dispersed
Mch10g1039 Mch-Chr10:7553712 Mch1g1478 Mch-Chr1:16329458 8.74E-63 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42493 PF05687 BES1_N 8.40E-66 No_clan Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g1039 - - - 0.0