Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch10g1039 | ATGACGTCGGGGACGAGGCTGCCGACATGGAGGGAGCGGGAAAACAACAAGAGAAGGGAGAGAAGGAGAAGAGCTATTGCGGCGAAGATCTTTGCTGGACTCAGGATGTACGGAAACTACAAGCTTCCCAAGCATTGCGATAACAATGAGGTTCTTAAAGCTCTCTGCAACGAAGCGGGTTGGACCGTGGAACCTGATGGTACCACTTACCGTAAGGGATGCAAGCCAATTGAACGTATGGATGTGGTTGGAGGATCGGCAGCTGCGAGTCCGTATGCATCTCACCAACCTAGTCCTTGTGCTTCCTTCAATCCAAGCCCCGGCTCATCTTCTTTTCCAAGTCCAGCATCATCCTCATATGTTGCTAATCCAAATGCTGATGGCAGTTCACTAATCCCATGGCTCAAAAACCTTTCTTCTTCATCATCTTCAGCATCCTCTTCTAAACTTCCCAATATCTACATTCATGGAGGTTCCATCAGTGCTCCTGTTACTCCTCCTCTGAGTTCCCCAACTGCCAGAACACCCCGACTCAAAGCCGACTGGGAAGATCAGTCTGTCCTGCCAGGATGGAGTGCACAATACTATTCCTCCTTGCCGTCTTCTACTCCACCAAGTCCTGGGCGTCAGATTGTTCCTAATCCAGAATGGTTTGCTGGACTCAGAATTCCTCAGGGTGGACCCAATTCTCCAACATTTAGTCTTGTCTCTACAAACCCATTTGGTTTCAAGGAAGCAGCAATGACTGGTGGAGGATCTCGCATGTGGACCCCTGGTCAAAGTGGGACCTGCTCTCCTGCCATTGCAGCAGGCTCCGATCACACTGCAGATATTCCAATGTCAGAAGTGATTTCTGATGAATTCGCATTTGGAAGCAATGCAGCCGGTATAGTAAAGCCATGGGAAGGGGAACGGATCCATGAAGAATGTGGTTCAGATGAACTAGAGCTCACTCTTGGGAACTCAAGGACCAGGTAA | 978 | 49.39 | MTSGTRLPTWRERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPIERMDVVGGSAAASPYASHQPSPCASFNPSPGSSSFPSPASSSYVANPNADGSSLIPWLKNLSSSSSSASSSKLPNIYIHGGSISAPVTPPLSSPTARTPRLKADWEDQSVLPGWSAQYYSSLPSSTPPSPGRQIVPNPEWFAGLRIPQGGPNSPTFSLVSTNPFGFKEAAMTGGGSRMWTPGQSGTCSPAIAAGSDHTADIPMSEVISDEFAFGSNAAGIVKPWEGERIHEECGSDELELTLGNSRTR | 325 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 7553712 | 7557369 | - | MC10g0884 | Mch10g1039 | 678132 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch10g1039 | 325 | MobiDBLite | consensus disorder prediction | 88 | 120 | - | - | |
Mch10g1039 | 325 | MobiDBLite | consensus disorder prediction | 91 | 120 | - | - | |
Mch10g1039 | 325 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Mch10g1039 | 325 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 3-RELATED | 1 | 325 | IPR033264 | GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro) | |
Mch10g1039 | 325 | Pfam | BES1/BZR1 plant transcription factor, N-terminal | 4 | 139 | IPR008540 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g1039 | Mch-Chr10:7553712 | Mch3g1052 | Mch-Chr3:14102456 | 1.46E-154 | dispersed | |
Mch10g1039 | Mch-Chr10:7553712 | Mch1g1478 | Mch-Chr1:16329458 | 8.74E-63 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
42493 | PF05687 | BES1_N | 8.40E-66 | No_clan | Mch | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch10g1039 | - | - | - | 0.0 |