Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch10g1058 | ATGACTTGTTTCCCTTGTTGTTCAAGAAGAAAGAGAGATTTGTTCGCTGCTCCAACAACAACAGCAGTCGAAGGTTTATTTGATACGGAGATTTCAAATATTCAGAACGTTCGCTTGTACTCATATGAAGAACTTAGAAAAGCAACTGAAAATTTCAGGTCTGAAAATAAACTTGGACAGGGAGGCTTTGGATCTGTCTACAAGGGAAGGCTCAAAGATGGAACGCTGGCTGCCATAAAGGTACTATCCGTGGACTCAAGCCAAGGGACACGGGAGTTTTTGGCAGAAATCAATGTGATTACATCTATAAACCATGATAACCTGGTTAAGTTGCATGGTTGTTGTCTGGAAGGGCACCACCGGATCTTGGTCTATCCTTACCTAGAAAATAACAGCCTTGACAGGACGCTTTTTGGTGGTTCAATATCTTGGAATGTCCAATTCAATTGGCAAACAAGGTGTAAAATATGCATCGGTATTGCACAGGGGCTCACATTCCTTCATGAAGAAGTTCAGCCACATGTTATCCACAGGGACATCAAAGCAAGCAATATCCTTCTTGATAAGGACTTAACCCCAAAAATTTCTGATTTTGGTCTTGCTAGATTACTCCCTGCTCACTTGACCCACATTAGTACACGTATCGCTGGGACA | 654 | 42.05 | MTCFPCCSRRKRDLFAAPTTTAVEGLFDTEISNIQNVRLYSYEELRKATENFRSENKLGQGGFGSVYKGRLKDGTLAAIKVLSVDSSQGTREFLAEINVITSINHDNLVKLHGCCLEGHHRILVYPYLENNSLDRTLFGGSISWNVQFNWQTRCKICIGIAQGLTFLHEEVQPHVIHRDIKASNILLDKDLTPKISDFGLARLLPAHLTHISTRIAGT | 218 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 7720831 | 7723941 | + | MC10g0900 | Mch10g1058 | 678151 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch10g1058 | 218 | FunFam | Os07g0541700 protein | 128 | 218 | - | - | |
Mch10g1058 | 218 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 175 | 187 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch10g1058 | 218 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 35 | 218 | IPR052059 | GO:0004674(PANTHER)|GO:0006468(PANTHER) | |
Mch10g1058 | 218 | FunFam | cold-responsive protein kinase 1 | 24 | 127 | - | - | |
Mch10g1058 | 218 | ProSitePatterns | Protein kinases ATP-binding region signature. | 58 | 80 | IPR017441 | GO:0005524(InterPro) | |
Mch10g1058 | 218 | Gene3D | Transferase(Phosphotransferase) domain 1 | 128 | 218 | - | - | |
Mch10g1058 | 218 | Gene3D | Phosphorylase Kinase; domain 1 | 25 | 127 | - | - | |
Mch10g1058 | 218 | SUPERFAMILY | Protein kinase-like (PK-like) | 33 | 218 | IPR011009 | - | |
Mch10g1058 | 218 | SMART | serkin_6 | 52 | 213 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch10g1058 | 218 | Pfam | Protein tyrosine and serine/threonine kinase | 54 | 204 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch10g1058 | 218 | ProSiteProfiles | Protein kinase domain profile. | 52 | 218 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g1058 | Mch-Chr10:7720831 | Mch5g1926 | Mch-Chr5:19192939 | 1.34E-74 | dispersed | |
Mch10g1058 | Mch-Chr10:7720831 | Mch10g0989 | Mch-Chr10:7067822 | 1.04E-95 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77019 | PF00069 | Pkinase | 3.20E-33 | CL0016 | Mch | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch10g1058 | - | - | - | 0.0 |