Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g1058 ATGACTTGTTTCCCTTGTTGTTCAAGAAGAAAGAGAGATTTGTTCGCTGCTCCAACAACAACAGCAGTCGAAGGTTTATTTGATACGGAGATTTCAAATATTCAGAACGTTCGCTTGTACTCATATGAAGAACTTAGAAAAGCAACTGAAAATTTCAGGTCTGAAAATAAACTTGGACAGGGAGGCTTTGGATCTGTCTACAAGGGAAGGCTCAAAGATGGAACGCTGGCTGCCATAAAGGTACTATCCGTGGACTCAAGCCAAGGGACACGGGAGTTTTTGGCAGAAATCAATGTGATTACATCTATAAACCATGATAACCTGGTTAAGTTGCATGGTTGTTGTCTGGAAGGGCACCACCGGATCTTGGTCTATCCTTACCTAGAAAATAACAGCCTTGACAGGACGCTTTTTGGTGGTTCAATATCTTGGAATGTCCAATTCAATTGGCAAACAAGGTGTAAAATATGCATCGGTATTGCACAGGGGCTCACATTCCTTCATGAAGAAGTTCAGCCACATGTTATCCACAGGGACATCAAAGCAAGCAATATCCTTCTTGATAAGGACTTAACCCCAAAAATTTCTGATTTTGGTCTTGCTAGATTACTCCCTGCTCACTTGACCCACATTAGTACACGTATCGCTGGGACA 654 42.05 MTCFPCCSRRKRDLFAAPTTTAVEGLFDTEISNIQNVRLYSYEELRKATENFRSENKLGQGGFGSVYKGRLKDGTLAAIKVLSVDSSQGTREFLAEINVITSINHDNLVKLHGCCLEGHHRILVYPYLENNSLDRTLFGGSISWNVQFNWQTRCKICIGIAQGLTFLHEEVQPHVIHRDIKASNILLDKDLTPKISDFGLARLLPAHLTHISTRIAGT 218
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 7720831 7723941 + MC10g0900 Mch10g1058 678151
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch10g1058 218 FunFam Os07g0541700 protein 128 218 - -
Mch10g1058 218 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch10g1058 218 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 35 218 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Mch10g1058 218 FunFam cold-responsive protein kinase 1 24 127 - -
Mch10g1058 218 ProSitePatterns Protein kinases ATP-binding region signature. 58 80 IPR017441 GO:0005524(InterPro)
Mch10g1058 218 Gene3D Transferase(Phosphotransferase) domain 1 128 218 - -
Mch10g1058 218 Gene3D Phosphorylase Kinase; domain 1 25 127 - -
Mch10g1058 218 SUPERFAMILY Protein kinase-like (PK-like) 33 218 IPR011009 -
Mch10g1058 218 SMART serkin_6 52 213 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g1058 218 Pfam Protein tyrosine and serine/threonine kinase 54 204 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch10g1058 218 ProSiteProfiles Protein kinase domain profile. 52 218 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1058 Mch-Chr10:7720831 Mch5g1926 Mch-Chr5:19192939 1.34E-74 dispersed
Mch10g1058 Mch-Chr10:7720831 Mch10g0989 Mch-Chr10:7067822 1.04E-95 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77019 PF00069 Pkinase 3.20E-33 CL0016 Mch PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g1058 - - - 0.0