Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch10g1090 | ATGGGTTGCGTTTGTTGTAAGCCCTCTGCTATAGAAGATAGCAAGGAGAGCCCAAGGGAGAGATTGTCAAGTAAGACCTCCTCCGACCTGCGGGTGGCAAGAGTGACTTCGTCATCGAGGGAGGAAGCTTATCGATCTAAAGATCAGCATGATGGTAATGATGCAAGAGTGGTGTTGATTGACAAGCAGGTGAATGGGTCGGGTCGACTGCAGAGTGAGAATCTTGAGAGGAAGCGAGAGAAGATGGAGTATCTGGGTGCTCAACATCCTGCAATGGGTAGAATTCCGAAGGCAGCAGAGGGGGATCACATTGCTGCAGGGTGGCCACCGTGGCTGGCTGCAGTTGCTGGAGAGGCAATCAGAGGGTGGTTACCCCGACGGGCCGATTCTTTTGAGAAATTGGATAAAATTGGCCAAGGAACTTATAGTAATGTATATAGGGCTCGTGACCTTGACCAAAAGAAAATTGTTGCTCTGAAGAAAGTAAGGTTTGACAACCTGGAACCTGAGAGTGTGCGCTTTATGGCAAGGGAAATCCACATTTTGCGAAGACTTGATCATCCGAATGTGATAAAGTTAGAAGGTCTAGTTACATCAAGGATGTCTTGCAGCCTCTATCTTGTTTTTGAGTACATGGAACATGACTTGGCTGGACTAGCTTCACACCCTGGTCTGAAGTTTACAGAATCTCAGGTCAAATGTTACATGCAACAACTTTTACGTGGCCTTGATCATTGCCACAGTCATGGAGTTCTACACCGTGATATAAAGGGCTCCAATCTTTTGATTGACAATAATGGCATTTTGAAAATTGCAGACTTTGGTCTAGCAAGTTTTTTTGATATCCACCAAAATCAGCCACTGACAAGCCGGGTTGTAACTCTTTGGTATCGACCACCTGAGCTTTTACTTGGTGCCACGTATTATGGTACAGCTGTAGATTTGTGGAGCACTGGCTGCATACTCGCTGAATTGTATGCTGGCAAGCCCATTATGCCAGGAAGAACAGAGGTGGAACAGCTACATAAAATATTTAAGCTATGTGGCTCACCATCAGAGGATTATTGGAGAAAATCAAGGTTGCCACATGCGACCATATTTAAGCCCCAACAGCCCTATAGGCGCTGTGTTGCAGACACATTTAAGGATTTCCCTGCACCAGCTTTAGCTCTTATTGAGACGTTACTCTCTATAGATCCTGCTGATCGTGGGTCTGCTGCTCTTGCCCTTAAAAGCGAATTCTTTTCAACAAAGCCACTTCCGTGTGATCCTTCTAGCTTGCCGAAGTATCCTCCCAGCAAAGAATTTGATGCTAAGATAAGGGATGAGGAGGCCAGAAGACAAGGAGCAGTTGGAAGCAAGGGACATCGACTAGACCTCCAAAGGAAAGATAGAGAGTCTCGAGCCGTCCCTGCACCAGATGCCAATGCTGAGTTAGCCTCGTCAATGCAGAAAAGACAAGGCCAGTCAAATTCGAAGAGCCGGAGCGAGAAGTTTAACCCACATCCCGAAGAAGCATCTGGCTTCCCAATTGATCCACCTAGACCTTCACAAGGAGCAGATGTAAGACTGGATTCTCAGGGGCGTCATCCCAAGAAAGCCTCACATTCAGGGCCACTTGCTCAGCGGGCTGCTTGGGCAAAGGCCAGTAAGAACCCAGATGATGCTCCAAAAATCTCAACCGGGGCCGACTCTTTCACAACTACAGGACTAGTAGCAGCTAGAAGAAGTATGCTGGCAGAAGATTGCAGGGAAAAATCTGACTCTTCACAAGGAGAGGTTCAAAAACTAATCGGCAGGTTTCCCGGTTCCTTCAAAGAAACCTCAGAGTCGTCGATGGTACCAGATCAGAAGTTCTCAAATCATAGTATTGTAGGCTCACACGACAAAGAAAGGAGCAGCACCAAAGACCCTATTCTTGTAAGTTATGGCTCAAAGGGTCATAAGATTCATTACTCTGGTCCATTGCTGGTTCCTTCTGGCAACATGGACCAAATGTTGAAGGACCACGATCGTCATATCCAAGAAGCCGTAAGACGGGCTCGGCTTGACAAAGCT | 2058 | 46.89 | MGCVCCKPSAIEDSKESPRERLSSKTSSDLRVARVTSSSREEAYRSKDQHDGNDARVVLIDKQVNGSGRLQSENLERKREKMEYLGAQHPAMGRIPKAAEGDHIAAGWPPWLAAVAGEAIRGWLPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFTESQVKCYMQQLLRGLDHCHSHGVLHRDIKGSNLLIDNNGILKIADFGLASFFDIHQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSRLPHATIFKPQQPYRRCVADTFKDFPAPALALIETLLSIDPADRGSAALALKSEFFSTKPLPCDPSSLPKYPPSKEFDAKIRDEEARRQGAVGSKGHRLDLQRKDRESRAVPAPDANAELASSMQKRQGQSNSKSRSEKFNPHPEEASGFPIDPPRPSQGADVRLDSQGRHPKKASHSGPLAQRAAWAKASKNPDDAPKISTGADSFTTTGLVAARRSMLAEDCREKSDSSQGEVQKLIGRFPGSFKETSESSMVPDQKFSNHSIVGSHDKERSSTKDPILVSYGSKGHKIHYSGPLLVPSGNMDQMLKDHDRHIQEAVRRARLDKA | 686 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 8041558 | 8047888 | - | MC10g0930 | Mch10g1090 | 678183 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch10g1090 | 686 | MobiDBLite | consensus disorder prediction | 35 | 54 | - | - | |
Mch10g1090 | 686 | MobiDBLite | consensus disorder prediction | 1 | 54 | - | - | |
Mch10g1090 | 686 | SMART | serkin_6 | 131 | 415 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch10g1090 | 686 | FunFam | probable serine/threonine-protein kinase At1g54610 | 214 | 455 | - | - | |
Mch10g1090 | 686 | CDD | STKc_CDK9_like | 131 | 415 | - | - | |
Mch10g1090 | 686 | MobiDBLite | consensus disorder prediction | 605 | 635 | - | - | |
Mch10g1090 | 686 | SUPERFAMILY | Protein kinase-like (PK-like) | 125 | 423 | IPR011009 | - | |
Mch10g1090 | 686 | Pfam | Protein kinase domain | 131 | 415 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch10g1090 | 686 | MobiDBLite | consensus disorder prediction | 605 | 622 | - | - | |
Mch10g1090 | 686 | MobiDBLite | consensus disorder prediction | 444 | 563 | - | - | |
Mch10g1090 | 686 | PANTHER | CELL DIVISION PROTEIN KINASE | 130 | 415 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) | |
Mch10g1090 | 686 | ProSitePatterns | Protein kinases ATP-binding region signature. | 137 | 160 | IPR017441 | GO:0005524(InterPro) | |
Mch10g1090 | 686 | ProSiteProfiles | Protein kinase domain profile. | 131 | 415 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch10g1090 | 686 | FunFam | probable serine/threonine-protein kinase At1g54610 | 118 | 213 | - | - | |
Mch10g1090 | 686 | Gene3D | Transferase(Phosphotransferase) domain 1 | 214 | 454 | - | - | |
Mch10g1090 | 686 | MobiDBLite | consensus disorder prediction | 12 | 27 | - | - | |
Mch10g1090 | 686 | MobiDBLite | consensus disorder prediction | 444 | 471 | - | - | |
Mch10g1090 | 686 | MobiDBLite | consensus disorder prediction | 480 | 496 | - | - | |
Mch10g1090 | 686 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 251 | 263 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch10g1090 | 686 | Gene3D | Phosphorylase Kinase; domain 1 | 118 | 213 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g1090 | Mch-Chr10:8041558 | Mch2g0641 | Mch-Chr2:4396942 | 6.86E-250 | dispersed | |
Mch11g1889 | Mch-Chr11:18731472 | Mch10g1090 | Mch-Chr10:8041558 | 1.27E-200 | transposed | |
Mch2g0040 | Mch-Chr2:321771 | Mch10g1090 | Mch-Chr10:8041558 | 3.56E-113 | transposed | |
Mch8g3155 | Mch-Chr8:33811609 | Mch10g1090 | Mch-Chr10:8041558 | 7.14E-36 | transposed | |
Mch10g1090 | Mch-Chr10:8041558 | Mch4g0128 | Mch-Chr4:846200 | 4.13E-40 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77021 | PF00069 | Pkinase | 1.50E-68 | CL0016 | Mch | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch10g1090 | - | - | - | 0.0 |