Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g1139 GATTCCTTGACTGCTCAAAACCCATTTCTCAGCGACGGGCTTAGTTTGGTCTCCAGAAATGGAAACTTCGAATTGGGTTTCTTCAGTCCTGGTCCTCCCGGTGACCGTTACTTGGGAATTTGGTTCAAGAATCGGCGAGGTCCGACCTCCGTTTGGGTTGCCAACAGGCAAACCCCCATTAATGATTCGTCTGGTGTGCTGGTTATGAACGTTACAACGGGAAATCTCACACTCTATAGCCAGAATTTCACTGCCAATGTTTGGTCCGCCAGGTTATTGAGAAAAGTTCCCAATGGGGTGCTCCAGCTTTTGGACACTGGAAATCTCGTGCTGAGAAAGGGGGAAGATCTAGATCCCCAAAACTATTCTTGGCAAAGCTTTGATTACCCAACCGACACTCTCTTGCCTGGAATGAAGCTGGGTTGGGACTTGAGAAATAACATAGATAGAAGTTTGTCTGCTTGGAAGAATCCCAATGACCCATCTCCTGGAAACCTGAGTTGGAGGATGGAGCTTCATGAATATCCTGAGTCTATCATGTGGAAAGGTTCCCAAGAGTACTTCAGGCATGGCCCATGGAATGGTGTGCGCGTCACTAGTAGACCATTAGGCATAGCGCCAATTCTGAACTTCAACTTTGTTTCTAATGAGGATGAAGTTTACTACCAATACTCTGTTGTAAATAAGTCTCATACAGTGATGGTGGTGTTGAACCAATCCAATTACATGCGCATAATGTACTTGTGGTCTGCTAGTGAGAGACATTGGAGAGTTTACACTTCATTACCGAGAGATTTCTGTGACAATTATGCTCTGTGTGGCCCTTATGGATATTGTGATATAAGGGTCACTCCATCTTGTAAATGTCTAGATGGGTTTAAGCCAAGATCACCTGACAGTTGGAAGGCAGGGGAATTTGCGGATGGTTGTGAACGGAACAAACCGATGAATTGTCGTGATGAAATAGGATTTGCACCGTTCAACCAGCTGAAGTTGCCAGACACAAAGCATACTTGGGTCAACAGAAGCATGAATCTTGAAGAATGCAAGGCAGAATGCTCGAGGAACTGCTCTTGTATGGCTTGTGCAAATACAAATATCAGTGGTAGTGGAAGTGGCTGTGCCTTATGGATTGGTGATCTAATTGACTTAAAACTGATTCCGGACGCTGGACAAGATTTATATGTCAGGATGCTAGCATCAGAATTAGTCAAGCATAGAGAGGCACATGAAACTGAAAGATTGAATCATAAGGTGAAGATTGCTTTGGTTGGGATTGCCACCGGTTTAGTTTTGGCAATCCTGTTCATAGGCGTATACATTTTCAAAAGGAGATCAACCTTCAAAGATGACCATGAGAAAATAGAAGCTAAAGACCTGGAGCTTCCCTTGTTTGATCTATCCCTGATAAATAGTGCCACAAATAACTTCTCACTTAATAATAAGCTAGGAGAAGGTGGCTTTGGGCCAGTATATAAGGGTAAGCTTACAAATGGACAAGATATTGCAGTGAAGAGACTTTCACAGAGTTCTGGACAGGGAATGAATGAGTTCAAGAACGAAGTAATCCTAATTGCAAAACTTCAACATCGAAATCTAGTAAAGCTTCTTGGTTGCTGCATTCAAGGAGACGAGAAAATGCTAGTTTATGAGTACATGCCAAACAAAAGTTTGGACTTCTTTATATTTGATCGAACACAGCGTCTATTATTAGACTGGTCAAAACGGTATTGCATTATATGTGGAATCGCGAGAGGACTTGTGTATCTTCATCAGGATTCCAGATTGAGGATTATACATAGAGATTTAAAAGCAAGTAATGTTTTACTTGATATGGATATGAATCCAAAAATCTCAGATTTTGGTCTTGCTAGAACTTGTGGTGGGGATCAAACTGAAGGACACACGATAAGAGTGGTTGGAACTTACGGATATATGGCACCCGAATATGCTTTTGATGGACAATTCTCGATAAAATCTGATGTATTTAGTTATGGCATCTTGTTGTTGGAGATCATTAGTGGAAAAAGAAGCAGAGGTTTCTGCCACTTGAATGACCAAAATCTGATTGGATATGCGTGGCGATTGTGGAAAGAGGGACATCCAGAAGAATTGATCGACGACGCCATTCGAGAAACGTGCATCTCTACGGAGGTTTTGAGATGTATCAATATCAGTTTGTTGTGTGTTCAACAACATCCCAATGATCGACCCACAATGGCATCGGTTGTTATGATGTTAGGCTGTGAAATTCCCTTATTGCAACCGAAACAACCAGGATTTTTTGCAGAAAATGAAGCCAGTGCAATGGGCGGTGGCTCGAGTAAAGATAAATCAACTTCGACCAACGAATTAACTATTACACTCCCAGATCCCCGGTAA 2382 42.23 DSLTAQNPFLSDGLSLVSRNGNFELGFFSPGPPGDRYLGIWFKNRRGPTSVWVANRQTPINDSSGVLVMNVTTGNLTLYSQNFTANVWSARLLRKVPNGVLQLLDTGNLVLRKGEDLDPQNYSWQSFDYPTDTLLPGMKLGWDLRNNIDRSLSAWKNPNDPSPGNLSWRMELHEYPESIMWKGSQEYFRHGPWNGVRVTSRPLGIAPILNFNFVSNEDEVYYQYSVVNKSHTVMVVLNQSNYMRIMYLWSASERHWRVYTSLPRDFCDNYALCGPYGYCDIRVTPSCKCLDGFKPRSPDSWKAGEFADGCERNKPMNCRDEIGFAPFNQLKLPDTKHTWVNRSMNLEECKAECSRNCSCMACANTNISGSGSGCALWIGDLIDLKLIPDAGQDLYVRMLASELVKHREAHETERLNHKVKIALVGIATGLVLAILFIGVYIFKRRSTFKDDHEKIEAKDLELPLFDLSLINSATNNFSLNNKLGEGGFGPVYKGKLTNGQDIAVKRLSQSSGQGMNEFKNEVILIAKLQHRNLVKLLGCCIQGDEKMLVYEYMPNKSLDFFIFDRTQRLLLDWSKRYCIICGIARGLVYLHQDSRLRIIHRDLKASNVLLDMDMNPKISDFGLARTCGGDQTEGHTIRVVGTYGYMAPEYAFDGQFSIKSDVFSYGILLLEIISGKRSRGFCHLNDQNLIGYAWRLWKEGHPEELIDDAIRETCISTEVLRCINISLLCVQQHPNDRPTMASVVMMLGCEIPLLQPKQPGFFAENEASAMGGGSSKDKSTSTNELTITLPDPR 793
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 8548939 8552609 + MC10g0972 Mch10g1139 678232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g1139 793 SUPERFAMILY alpha-D-mannose-specific plant lectins 50 161 IPR036426 -
Mch10g1139 793 ProSiteProfiles Protein kinase domain profile. 477 754 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g1139 793 Gene3D - 1 127 IPR036426 -
Mch10g1139 793 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 553 755 - -
Mch10g1139 793 Pfam PAN-like domain 319 384 IPR003609 -
Mch10g1139 793 Pfam Protein tyrosine and serine/threonine kinase 478 746 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch10g1139 793 Gene3D Transferase(Phosphotransferase) domain 1 553 751 - -
Mch10g1139 793 SMART serkin_6 477 747 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g1139 793 SUPERFAMILY Protein kinase-like (PK-like) 461 747 IPR011009 -
Mch10g1139 793 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 442 552 - -
Mch10g1139 793 CDD PAN_AP_plant 315 397 - -
Mch10g1139 793 PIRSF SRK 1 793 IPR024171 GO:0004674(InterPro)
Mch10g1139 793 ProSiteProfiles Bulb-type lectin domain profile. 1 124 IPR001480 -
Mch10g1139 793 Pfam D-mannose binding lectin 49 156 IPR001480 -
Mch10g1139 793 ProSiteProfiles PAN/Apple domain profile. 318 399 IPR003609 -
Mch10g1139 793 MobiDBLite consensus disorder prediction 772 793 - -
Mch10g1139 793 Gene3D Phosphorylase Kinase; domain 1 450 552 - -
Mch10g1139 793 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 6 761 - -
Mch10g1139 793 CDD STKc_IRAK 483 747 - -
Mch10g1139 793 SMART blect_4 7 130 IPR001480 -
Mch10g1139 793 SMART ntp_6 319 398 IPR003609 -
Mch10g1139 793 Pfam S-locus glycoprotein domain 188 296 IPR000858 GO:0048544(InterPro)
Mch10g1139 793 ProSitePatterns Serine/Threonine protein kinases active-site signature. 598 610 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch10g1139 793 MobiDBLite consensus disorder prediction 764 793 - -
Mch10g1139 793 CDD B_lectin 10 130 IPR001480 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1139 Mch-Chr10:8548939 Mch3g1187 Mch-Chr3:15081308 7.19E-231 dispersed
Mch10g1139 Mch-Chr10:8548939 Mch11g1127 Mch-Chr11:7892222 0 wgd
Mch10g1139 Mch-Chr10:8548939 Mch3g1179 Mch-Chr3:15018230 2.27E-221 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77022 PF07714 PK_Tyr_Ser-Thr 1.40E-49 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g1139 - - - 0.0