Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g1237 ATGATCTCTTCTTTGAGTCAATCTGCAAAATCGATTAATGGGTCCGACGTTGTTCTCCGGCGGAGGTCTCCGGCGCCAATCCGGCGGTTTTCGTGTCCACCTCCATTGCCGGTGCAGAAACCCCAAGGCGCCGTAGTCTGTATGAAAAATGCTCTTCATGTCTCTTCGGTTTCGAACTTTGGGCCATTGGGAACTCGGAAGAGTGATTTGATTACGAGAAAAGCTTATGAGGCTGATCGGTCGGAGCCGATCGAGTCGAACATTGAACTGACGGTGGCCGAAGCGCCGTCGGAGGCGGCGGCGAAGAAGGTTAAGATCGGGCTGTACTTCGCTCTGTGGTGGGGTTTGAACGTGGTGTTCAACATTTACAACAAGAAGGTTTTGAATGCGTATCCATATCCATGGCTGACCTCCACACTTTCTCTCGCTGTTGGCTCTCTCATCATGTTATTCTCTTGGATGACCAGGATCGCCGAGGCACCCAAGACCGATTTTGAGTTCTGGAAGTCTCTGTTCCCGGTTGCTGTGGCCCATACGATTGGACATGTAGCGGCAACCGTGAGCATGTCAAAGGTCGCTGTCTCATTCACTCATATCATCAAGAGTGGTGAGCCTGCCTTTAGTGTACTGGTTTCAAGGTTCTTGTTGGGTGAAACTTTTCCACTTCCTGTCTATCTCTCTCTCGTCCCGATCATCGGTGGCTGTGCGCTCGCTGCTGTGACTGAGCTCAACTTCAACATGATTGGTTTCATGGGAGCCATGATATCAAACTTGGCATTCGTCTTCCGAAACATATTCTCGAAGAAAGGCATGAAGGGGAAGTCCGTTAGTGGAATGAACTACTACGCCTGTCTTTCGATATTGTCCCTTTTGATTCTTACTCCGTTCGCCATTGCTGTCGAAGGACCGCAAATATGGGCTGCTGGATGGAAAACAGCTCTCTCTCAGATTGGACCTAATTTCGTATGGTGGGTAGCAGCACAGAGTGTGTTCTATCATCTCTACAACCAAGTTTCTTACATGTCGTTGGATGAGATTTCTCCCTTGACGTTCAGCATTGGTAACACCATGAAGCGTATATCAGTGATAGTTTCTGCGATCATCATCTTCCGCACCCCGGTCCAGCCCGTCAACGCTCTCGGAGCCGCCATCGCCGTTTTTGGGACCTTCTTGTATTCACAGGCAAAACAATGA 1194 49.58 MISSLSQSAKSINGSDVVLRRRSPAPIRRFSCPPPLPVQKPQGAVVCMKNALHVSSVSNFGPLGTRKSDLITRKAYEADRSEPIESNIELTVAEAPSEAAAKKVKIGLYFALWWGLNVVFNIYNKKVLNAYPYPWLTSTLSLAVGSLIMLFSWMTRIAEAPKTDFEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYLSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQIWAAGWKTALSQIGPNFVWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSAIIIFRTPVQPVNALGAAIAVFGTFLYSQAKQ 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9967891 9971683 + MC10g1029 Mch10g1237 678330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g1237 397 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 105 396 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Mch10g1237 397 PANTHER SOLUTE CARRIER FAMILY 35 99 396 IPR050186 GO:0005794(PANTHER)|GO:0015120(PANTHER)|GO:0015297(PANTHER)|GO:0071917(PANTHER)
Mch10g1237 397 Pfam Triose-phosphate Transporter family 105 393 IPR004853 -
Mch10g1237 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 147 240 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1237 Mch-Chr10:9967891 Mch1g1770 Mch-Chr1:18083541 2.96E-192 dispersed
Mch10g1237 Mch-Chr10:9967891 Mch11g1168 Mch-Chr11:8215615 4.61E-233 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g1237 K15283 - csv:101216838 721.85