Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g1250 ATGAATTGCTTTCAATGTTGCATGTCCGAGGAGAAGGTCAATAGGAAGTCTTTGAAAAAGAGCATTAAGGAGTATAATGACACCAAAACTTTAGCCTCTTTTGCCAACATTTCCTTCAAATCTGATAGCAGCAGGCGAAGGTACATAACTGAGGAGATAAAGAAGTTAGGAAAAGGAAACATCTCAGCCCAAATTTTTACGTTTCGTGAGCTATGTGTCGCGACGAATAACTTCAACCACGAAAATCTGTTGGGAGAAGGTGGTTTTGGAAGGGTTTACAAAGGCGTCATTGAGGCCACGAAACAAGTAACGGCCGTGAAGCAACTCGACCGAAATGGGTTTCAAGGAAACAGAGAATTCCTTGTAGAGGTTTTGATGTTGAGCCTACTTCACCATCCCAATCTTGTTAATTTGGTTGGATATTGTGCTGATGGGGACCAGAGGATTTTGGTTTATGAGTTCATGGCCAAAGGTTCCTTGGAGGATCATCTTCTTGATATAGCTTCAGATAAACCGCCTCTGGACTGGAAGACAAGGATGAAAATCGCCGAAGGAGCAGCAAAAGGACTGGAATACTTGCATGAAACCGCCAATCCTCCCGTGATATACCGTGATTTCAAAGCTTCAAACATATTGTTGGATGAGGAGTTCAATCCAAAGCTCTCTGATTTTGGTCTTGCAAAGTTAGGTCCCACTGGGGATAAATCTCATGTTTCCACTAGAGTGATGGGAACCTATGGTTACTGTGCTCCTGAATATGCCCTTACAGGACAGTTGACGACGAAATCAGATGTCTACAGTTTCGGTGTCGTGTTTCTGGAGATAATCACTGGAAGAAGAGTTATAGACAATGCAAGACCAACAGCAGAACAGAATCTAATTACTTGGGCACAGCCACTATTCAAAGACAGAAGGAAATTTACACTAATGGCAGATCCAAAGCTAGAAGGAGATTACCCAGTGAAGGCTCTGTATCAAGCTCTGGCAGTGGCAGCCATGTGTTTACAAGAGGAAGCAAATACTCGGCCATTGATCAGCGACGTGGTTACGGCTCTTGAATATTTAGCCGCAAACAAGGATGTTGATGCAGACGTAGATGGCGAATCAGATTCGGGATCCGTGTCAGGATCGGAATTGGGATCAGGTTCAGCTTCTCCTGATAGAAGTAGTAATAATGGAGATAAAAATGTTGATGTGGAGGGTGATGGGAGGTGA 1215 43.54 MNCFQCCMSEEKVNRKSLKKSIKEYNDTKTLASFANISFKSDSSRRRYITEEIKKLGKGNISAQIFTFRELCVATNNFNHENLLGEGGFGRVYKGVIEATKQVTAVKQLDRNGFQGNREFLVEVLMLSLLHHPNLVNLVGYCADGDQRILVYEFMAKGSLEDHLLDIASDKPPLDWKTRMKIAEGAAKGLEYLHETANPPVIYRDFKASNILLDEEFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTTKSDVYSFGVVFLEIITGRRVIDNARPTAEQNLITWAQPLFKDRRKFTLMADPKLEGDYPVKALYQALAVAAMCLQEEANTRPLISDVVTALEYLAANKDVDADVDGESDSGSVSGSELGSGSASPDRSSNNGDKNVDVEGDGR 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 10104838 10107569 - MC10g1036 Mch10g1250 678343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g1250 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch10g1250 404 MobiDBLite consensus disorder prediction 363 404 - -
Mch10g1250 404 ProSiteProfiles Protein kinase domain profile. 78 355 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g1250 404 Gene3D Phosphorylase Kinase; domain 1 62 154 - -
Mch10g1250 404 CDD STKc_IRAK 84 353 - -
Mch10g1250 404 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524(InterPro)
Mch10g1250 404 Pfam Protein kinase domain 79 349 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g1250 404 PANTHER OS07G0668900 PROTEIN 30 362 - -
Mch10g1250 404 FunFam Serine/threonine-protein kinase PBS1 155 369 - -
Mch10g1250 404 Gene3D Transferase(Phosphotransferase) domain 1 155 373 - -
Mch10g1250 404 MobiDBLite consensus disorder prediction 370 392 - -
Mch10g1250 404 FunFam Serine/threonine-protein kinase CDL1-like 49 154 - -
Mch10g1250 404 Coils Coil 8 28 - -
Mch10g1250 404 SUPERFAMILY Protein kinase-like (PK-like) 62 350 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1250 Mch-Chr10:10104838 Mch5g0682 Mch-Chr5:4584271 8.84E-173 dispersed
Mch10g1250 Mch-Chr10:10104838 Mch9g1622 Mch-Chr9:18385833 8.91E-166 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77024 PF00069 Pkinase 2.70E-46 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g1250 - - - 0.0