Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch10g1271 | GAAGCAAATTACATGGTTGATCTAGACGTGGAGATTCCAACAGCTTTCAATCCGTTTGCGGACGCGAAGGACTCGGATGCGCCGGGGAACAAGGAGTACGTGCATGTAAGGGTCCAGCAGAGGAATGGGAAGAAGTGTCTGACTACAGTTCAAGGGCTGAAGAAAGATTTCAGCTACGACAAGATCCTCAAGGACCTGAAGAAGGACTTCTGTTGCAATGGGAATGTGGTGCAGGACAAGGAGCTGGGCAAGATAATCCAACTCCAAGGCGATCAGCGCAAGAACGTCTCCCAGTTCCTCGTTCAGGCCGGCCTCGTCAAGAAGGATCAAATCAAGATTCATGGTTTT | 348 | 50.0 | EANYMVDLDVEIPTAFNPFADAKDSDAPGNKEYVHVRVQQRNGKKCLTTVQGLKKDFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF | 116 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 10438393 | 10438740 | - | MC10g1048 | Mch10g1271 | 678364 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch10g1271 | 116 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 34 | 104 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Mch10g1271 | 116 | PIRSF | Transl_init_SUI1_Euk | 5 | 116 | IPR005874 | GO:0003743(InterPro) | |
Mch10g1271 | 116 | NCBIfam | translation initiation factor SUI1 | 10 | 116 | IPR005874 | GO:0003743(InterPro) | |
Mch10g1271 | 116 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 5 | 116 | - | GO:0003723(PANTHER) | |
Mch10g1271 | 116 | FunFam | Eukaryotic translation initiation factor SUI1 | 6 | 116 | - | - | |
Mch10g1271 | 116 | Gene3D | - | 2 | 116 | - | - | |
Mch10g1271 | 116 | Pfam | Translation initiation factor SUI1 | 31 | 105 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Mch10g1271 | 116 | CDD | eIF1_SUI1 | 32 | 115 | IPR005874 | GO:0003743(InterPro) | |
Mch10g1271 | 116 | SUPERFAMILY | eIF1-like | 5 | 116 | IPR036877 | GO:0003743(InterPro)|GO:0006413(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g1271 | Mch-Chr10:10438393 | Mch11g1191 | Mch-Chr11:8371201 | 2.22E-73 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch10g1271 | K03113 | - | csv:101214921 | 221.476 |