Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g1271 GAAGCAAATTACATGGTTGATCTAGACGTGGAGATTCCAACAGCTTTCAATCCGTTTGCGGACGCGAAGGACTCGGATGCGCCGGGGAACAAGGAGTACGTGCATGTAAGGGTCCAGCAGAGGAATGGGAAGAAGTGTCTGACTACAGTTCAAGGGCTGAAGAAAGATTTCAGCTACGACAAGATCCTCAAGGACCTGAAGAAGGACTTCTGTTGCAATGGGAATGTGGTGCAGGACAAGGAGCTGGGCAAGATAATCCAACTCCAAGGCGATCAGCGCAAGAACGTCTCCCAGTTCCTCGTTCAGGCCGGCCTCGTCAAGAAGGATCAAATCAAGATTCATGGTTTT 348 50.0 EANYMVDLDVEIPTAFNPFADAKDSDAPGNKEYVHVRVQQRNGKKCLTTVQGLKKDFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 116
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 10438393 10438740 - MC10g1048 Mch10g1271 678364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g1271 116 ProSiteProfiles Translation initiation factor SUI1 family profile. 34 104 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Mch10g1271 116 PIRSF Transl_init_SUI1_Euk 5 116 IPR005874 GO:0003743(InterPro)
Mch10g1271 116 NCBIfam translation initiation factor SUI1 10 116 IPR005874 GO:0003743(InterPro)
Mch10g1271 116 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 5 116 - GO:0003723(PANTHER)
Mch10g1271 116 FunFam Eukaryotic translation initiation factor SUI1 6 116 - -
Mch10g1271 116 Gene3D - 2 116 - -
Mch10g1271 116 Pfam Translation initiation factor SUI1 31 105 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Mch10g1271 116 CDD eIF1_SUI1 32 115 IPR005874 GO:0003743(InterPro)
Mch10g1271 116 SUPERFAMILY eIF1-like 5 116 IPR036877 GO:0003743(InterPro)|GO:0006413(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1271 Mch-Chr10:10438393 Mch11g1191 Mch-Chr11:8371201 2.22E-73 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g1271 K03113 - csv:101214921 221.476