Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g1420 ATGGAACCAAAAGCCATCACTTCCTCCTCCGCCGACGACCAAGAAGACCAACACTTTGCTTACGCAGCCCATTTGGTTACCCTATCAGTTTTTCCCTTCACTCTCCAAGCGGCTTTTGAGCTCGGCGTCTTCGAGATCCTGGCCAAGGCCGGCCCCGGGGCCGAGCTCGCTGCGGCGGAGATAGCGGCGAAGATAACGGCGACGAACCCGAATGCCGCGTCGATGGTGGATCGGATACTGAGGCTTCTGGCCACGCACTCGGTGGTCGTATGCTCCACGGCGGAGGATGAAGGTGGGAATGTGAAGAGACTCTATAGCCTTACGCCGGTTTCTAAGTACTTCGTTGGTAATGAAGATGGTGTGTCGTTGGGCCCTGCTATGGAGTTGATTCAAGATAAAGTGCTTCTTGATAGCTGGAGACAGCTGAAGAATGCAGTTATTGAAGGAGGAGTTCCTTTCAATAGGGCTCATGGTGGAGCACATGCCTTTGAATACCCTTGCCTGGATCCAAGATTTAGCAAAGTTTTCAATACTGCAATGATCAATCACACCACCATGGGCATCAACAAGATTGTTGAGTTCTACAAAGGCTTTGAAAATCTCAAGCAATTAGTTGATGTTGGTGGAGGCCTAGGGGTCACCCTTCAAGTCATCACTTCTAAATACCGTTCAATCAAAGGCATCAACTTCGACTTACCTCGCGTCATTCGTGATGCCCCGACCTATCCCGGCGTAGAAGACATGTTTGAGAGCGTTCCAAAGGGAGATGCTATTTTCATGAAGTGGATACTTCATGATTGGAGTGATAAACATTGCGTGAAGTTGTTGAAGGATTGCCATGTTGCGATTCCAGATGAGGGGAAGGTAATTGTAGTGGATGCAGTGGTTCCAATGGTGATTGAGACTACGAGTACGATGAAATTCGTTACGCAAGGCGATGTGCTTATGATGACTCAAAGTCCAGGGGGAAAAGAGCGAACTCGAGATGAATTTAAAGCCCTCGCAACCAAAGCTAGGTTTAAACACATCAACTTTGAATGTTTTGTATATAATCTATGGGTTATGGAGTTCATCAAA 1077 47.82 MEPKAITSSSADDQEDQHFAYAAHLVTLSVFPFTLQAAFELGVFEILAKAGPGAELAAAEIAAKITATNPNAASMVDRILRLLATHSVVVCSTAEDEGGNVKRLYSLTPVSKYFVGNEDGVSLGPAMELIQDKVLLDSWRQLKNAVIEGGVPFNRAHGGAHAFEYPCLDPRFSKVFNTAMINHTTMGINKIVEFYKGFENLKQLVDVGGGLGVTLQVITSKYRSIKGINFDLPRVIRDAPTYPGVEDMFESVPKGDAIFMKWILHDWSDKHCVKLLKDCHVAIPDEGKVIVVDAVVPMVIETTSTMKFVTQGDVLMMTQSPGGKERTRDEFKALATKARFKHINFECFVYNLWVMEFIK 359
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 13416138 13433605 - MC10g1125 Mch10g1420 678513
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch10g1420 359 PANTHER O-METHYLTRANSFERASE 20 341 IPR016461 GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER)
Mch10g1420 359 PIRSF O-mtase 1 359 IPR016461 GO:0008168(InterPro)
Mch10g1420 359 FunFam Caffeic acid O-methyltransferase 115 359 - -
Mch10g1420 359 Gene3D Vaccinia Virus protein VP39 116 359 IPR029063 -
Mch10g1420 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 359 IPR016461 GO:0008168(InterPro)
Mch10g1420 359 Pfam O-methyltransferase domain 139 340 IPR001077 GO:0008171(InterPro)
Mch10g1420 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 119 357 IPR029063 -
Mch10g1420 359 Gene3D - 2 114 IPR036388 -
Mch10g1420 359 FunFam Caffeic acid 3-O-methyltransferase 2 114 - -
Mch10g1420 359 Pfam Dimerisation domain 34 84 IPR012967 GO:0046983(InterPro)
Mch10g1420 359 SUPERFAMILY Winged helix DNA-binding domain 13 117 IPR036390 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1420 Mch-Chr10:13416138 Mch4g0880 Mch-Chr4:6405874 1.72E-197 dispersed
Mch10g1420 Mch-Chr10:13416138 Mch10g1421 Mch-Chr10:13443865 1.31E-230 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g1420 K13066 - csv:101214916 499.204