Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch10g1420 | ATGGAACCAAAAGCCATCACTTCCTCCTCCGCCGACGACCAAGAAGACCAACACTTTGCTTACGCAGCCCATTTGGTTACCCTATCAGTTTTTCCCTTCACTCTCCAAGCGGCTTTTGAGCTCGGCGTCTTCGAGATCCTGGCCAAGGCCGGCCCCGGGGCCGAGCTCGCTGCGGCGGAGATAGCGGCGAAGATAACGGCGACGAACCCGAATGCCGCGTCGATGGTGGATCGGATACTGAGGCTTCTGGCCACGCACTCGGTGGTCGTATGCTCCACGGCGGAGGATGAAGGTGGGAATGTGAAGAGACTCTATAGCCTTACGCCGGTTTCTAAGTACTTCGTTGGTAATGAAGATGGTGTGTCGTTGGGCCCTGCTATGGAGTTGATTCAAGATAAAGTGCTTCTTGATAGCTGGAGACAGCTGAAGAATGCAGTTATTGAAGGAGGAGTTCCTTTCAATAGGGCTCATGGTGGAGCACATGCCTTTGAATACCCTTGCCTGGATCCAAGATTTAGCAAAGTTTTCAATACTGCAATGATCAATCACACCACCATGGGCATCAACAAGATTGTTGAGTTCTACAAAGGCTTTGAAAATCTCAAGCAATTAGTTGATGTTGGTGGAGGCCTAGGGGTCACCCTTCAAGTCATCACTTCTAAATACCGTTCAATCAAAGGCATCAACTTCGACTTACCTCGCGTCATTCGTGATGCCCCGACCTATCCCGGCGTAGAAGACATGTTTGAGAGCGTTCCAAAGGGAGATGCTATTTTCATGAAGTGGATACTTCATGATTGGAGTGATAAACATTGCGTGAAGTTGTTGAAGGATTGCCATGTTGCGATTCCAGATGAGGGGAAGGTAATTGTAGTGGATGCAGTGGTTCCAATGGTGATTGAGACTACGAGTACGATGAAATTCGTTACGCAAGGCGATGTGCTTATGATGACTCAAAGTCCAGGGGGAAAAGAGCGAACTCGAGATGAATTTAAAGCCCTCGCAACCAAAGCTAGGTTTAAACACATCAACTTTGAATGTTTTGTATATAATCTATGGGTTATGGAGTTCATCAAA | 1077 | 47.82 | MEPKAITSSSADDQEDQHFAYAAHLVTLSVFPFTLQAAFELGVFEILAKAGPGAELAAAEIAAKITATNPNAASMVDRILRLLATHSVVVCSTAEDEGGNVKRLYSLTPVSKYFVGNEDGVSLGPAMELIQDKVLLDSWRQLKNAVIEGGVPFNRAHGGAHAFEYPCLDPRFSKVFNTAMINHTTMGINKIVEFYKGFENLKQLVDVGGGLGVTLQVITSKYRSIKGINFDLPRVIRDAPTYPGVEDMFESVPKGDAIFMKWILHDWSDKHCVKLLKDCHVAIPDEGKVIVVDAVVPMVIETTSTMKFVTQGDVLMMTQSPGGKERTRDEFKALATKARFKHINFECFVYNLWVMEFIK | 359 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 13416138 | 13433605 | - | MC10g1125 | Mch10g1420 | 678513 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch10g1420 | 359 | PANTHER | O-METHYLTRANSFERASE | 20 | 341 | IPR016461 | GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER) | |
| Mch10g1420 | 359 | PIRSF | O-mtase | 1 | 359 | IPR016461 | GO:0008168(InterPro) | |
| Mch10g1420 | 359 | FunFam | Caffeic acid O-methyltransferase | 115 | 359 | - | - | |
| Mch10g1420 | 359 | Gene3D | Vaccinia Virus protein VP39 | 116 | 359 | IPR029063 | - | |
| Mch10g1420 | 359 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 23 | 359 | IPR016461 | GO:0008168(InterPro) | |
| Mch10g1420 | 359 | Pfam | O-methyltransferase domain | 139 | 340 | IPR001077 | GO:0008171(InterPro) | |
| Mch10g1420 | 359 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 119 | 357 | IPR029063 | - | |
| Mch10g1420 | 359 | Gene3D | - | 2 | 114 | IPR036388 | - | |
| Mch10g1420 | 359 | FunFam | Caffeic acid 3-O-methyltransferase | 2 | 114 | - | - | |
| Mch10g1420 | 359 | Pfam | Dimerisation domain | 34 | 84 | IPR012967 | GO:0046983(InterPro) | |
| Mch10g1420 | 359 | SUPERFAMILY | Winged helix DNA-binding domain | 13 | 117 | IPR036390 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch10g1420 | Mch-Chr10:13416138 | Mch4g0880 | Mch-Chr4:6405874 | 1.72E-197 | dispersed | |
| Mch10g1420 | Mch-Chr10:13416138 | Mch10g1421 | Mch-Chr10:13443865 | 1.31E-230 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch10g1420 | K13066 | - | csv:101214916 | 499.204 |