Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g1421 ATGGAACAAAAAGCCATCAATTCCTCCTCCGCCGACGACCAAGAACAGCAACACTTTGCTTACGCTGCTCATTTGGTTACCTTATCAGTTTTTCCCTTCACTCTCCAAGCCGCCTTCGAGCTCGGCGTCTTCGAGATCCTGACCAAGGCCGGCCCCGGGGCCGAGCTCTCCGCGGCAGAGATAGCAGCAAAGATAACGGCGACGAACCCGAATGCGGCGTCGATGGTCGATCGGATACTGAGGCTTCTGGCCACGCACTCGGTGGTTGGATGCTCCACGGCGGAGGATGAAGGTGGGAATGTGAAGAGACTCTATAGCCTCACGCCGGTTTCTAAGTATTTCGTTCGTAACGAAGATGGTGTGTCGTTGGGCCCTGTCATGGAGTTGATTCAAGATAAAGTCTTTCTTGATAGCTGGAGAGAGCTGAAGAATGCAGTCATTGAAGGAGGAGTTGCTTTCAATAGGGCTCATGGTGGAGTACATGCCTTTGAATACCCTGGCCTGGATCCAAGATTTAACAAGGTTTTCAACACTGCAATGATCAATCACACTACCATGGGCATCAAGAAGATTGTTGAGTCCTACAAAGGCTTTGGAAATCTCAACCAACTTGTGGATGTTGGTGGAGGCCTAGGGGTCACTCTTCAAGTCATCACTTCTAAATACCCTTCAATCAAGGGCATCAACTTCGACTTACCTCACGTCATTCGTGATGCCCCGGCCTATCCCGGTGTAGAACATATAGGAGGTGACATGTTTGAGAGCGTTCCAAAGGGAGATGCTATTTTCATGAAGTGGATACTTCATGATTGGAGTGATGAACACTGCGTGAAGTTGTTGAAGAATTGTTATGCTGCAATTCCAAATGATGGGAAGGTAATTGCAGTGGATGCAGTGGTTCCATTGGTGATCGAGACTACGATTACAATGAAATCCATTACCCAAGGCGATGTGCTTATGATGACTCAAAATCCAGGGGGAAAAGAGCGAACTCGAGATGAATTCAAAGCACTCGCAACCAAAACTGGGTTTAAACGTATCAACTTTGAATGTTTTGTATATAATCTCTGGGTTATAGAGTTCATCAAATGA 1092 47.16 MEQKAINSSSADDQEQQHFAYAAHLVTLSVFPFTLQAAFELGVFEILTKAGPGAELSAAEIAAKITATNPNAASMVDRILRLLATHSVVGCSTAEDEGGNVKRLYSLTPVSKYFVRNEDGVSLGPVMELIQDKVFLDSWRELKNAVIEGGVAFNRAHGGVHAFEYPGLDPRFNKVFNTAMINHTTMGIKKIVESYKGFGNLNQLVDVGGGLGVTLQVITSKYPSIKGINFDLPHVIRDAPAYPGVEHIGGDMFESVPKGDAIFMKWILHDWSDEHCVKLLKNCYAAIPNDGKVIAVDAVVPLVIETTITMKSITQGDVLMMTQNPGGKERTRDEFKALATKTGFKRINFECFVYNLWVIEFIK 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 13443865 13448153 - MC10g1126 Mch10g1421 678514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g1421 363 Pfam Dimerisation domain 34 84 IPR012967 GO:0046983(InterPro)
Mch10g1421 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 119 361 IPR029063 -
Mch10g1421 363 PANTHER O-METHYLTRANSFERASE 20 347 IPR016461 GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER)
Mch10g1421 363 PIRSF O-mtase 1 363 IPR016461 GO:0008168(InterPro)
Mch10g1421 363 Gene3D - 1 114 IPR036388 -
Mch10g1421 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 363 IPR016461 GO:0008168(InterPro)
Mch10g1421 363 SUPERFAMILY Winged helix DNA-binding domain 13 118 IPR036390 -
Mch10g1421 363 Gene3D Vaccinia Virus protein VP39 115 363 IPR029063 -
Mch10g1421 363 Pfam O-methyltransferase domain 139 345 IPR001077 GO:0008171(InterPro)
Mch10g1421 363 FunFam Caffeic acid 3-O-methyltransferase 1 114 - -
Mch10g1421 363 FunFam Caffeic acid O-methyltransferase 115 363 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0022 Mch-Chr10:138687 Mch10g1421 Mch-Chr10:13443865 6.90E-139 dispersed
Mch10g1421 Mch-Chr10:13443865 Mch4g0880 Mch-Chr4:6405874 4.10E-218 dispersed
Mch10g1420 Mch-Chr10:13416138 Mch10g1421 Mch-Chr10:13443865 1.31E-230 tandem
Mch10g1421 Mch-Chr10:13443865 Mch10g1422 Mch-Chr10:13464794 6.44E-89 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g1421 K13066 - csv:101214916 553.518