Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g1422 ATGCTCAATGAAACCACAATGGGTATTAAGAAGATTGTTGAGTCCTACAAAGGCTTTGCAAATCTCAAACAACTAGTTGATGTTGGTGGTGGCCTAGGGGTCACTCTCCAAATCATCACTTCTAAATACCCTTCGATAGAAGGCATCAACTTCGACTTACCTCACGTCATCCGCGATGCCCCGGCCTATCCTGGCGTAGAACATGTAGGAGGAAACATGTTTGAGAGCGTTCCAAGGGGAGAGGCTATTTTCTTGAAGTGGATCCTCCATGATTGGAGTGATGAGCACTGCATGAAGTTGATGAAGAATTGTCATGCTGCGATTCCAGGTGATGGAAAGATAATTGTTGTAGAGGCAGTATTGCCAATGATGGTTGAGACCACGAGTGCAGTGAAGTCCATCACCGAAGTCGATGTGCTTATGATGACTCAAAATTCAGGAGGAAAGAGCGAACTCGAGATGAATTCAAAGCCCTTGCAACTGCAGTTGGGTTTAAATACATCAAGTTTGAATGTTTTGTATGTAATCTTTGGCTCATGGAGTTCTTAA 549 43.72 MLNETTMGIKKIVESYKGFANLKQLVDVGGGLGVTLQIITSKYPSIEGINFDLPHVIRDAPAYPGVEHVGGNMFESVPRGEAIFLKWILHDWSDEHCMKLMKNCHAAIPGDGKIIVVEAVLPMMVETTSAVKSITEVDVLMMTQNSGGKSELEMNSKPLQLQLGLNTSSLNVLYVIFGSWSS 182
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 13464794 13466772 - MC10g_new0296 Mch10g1422 678515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g1422 182 Gene3D Vaccinia Virus protein VP39 6 165 IPR029063 -
Mch10g1422 182 PANTHER O-METHYLTRANSFERASE 1 154 IPR016461 GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER)
Mch10g1422 182 Pfam O-methyltransferase domain 3 149 IPR001077 GO:0008171(InterPro)
Mch10g1422 182 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 182 IPR016461 GO:0008168(InterPro)
Mch10g1422 182 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 149 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1422 Mch-Chr10:13464794 Mch4g0880 Mch-Chr4:6405874 1.04E-86 dispersed
Mch10g1421 Mch-Chr10:13443865 Mch10g1422 Mch-Chr10:13464794 6.44E-89 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g1422 K13066 - csv:101214916 241.506