Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch10g1422 | ATGCTCAATGAAACCACAATGGGTATTAAGAAGATTGTTGAGTCCTACAAAGGCTTTGCAAATCTCAAACAACTAGTTGATGTTGGTGGTGGCCTAGGGGTCACTCTCCAAATCATCACTTCTAAATACCCTTCGATAGAAGGCATCAACTTCGACTTACCTCACGTCATCCGCGATGCCCCGGCCTATCCTGGCGTAGAACATGTAGGAGGAAACATGTTTGAGAGCGTTCCAAGGGGAGAGGCTATTTTCTTGAAGTGGATCCTCCATGATTGGAGTGATGAGCACTGCATGAAGTTGATGAAGAATTGTCATGCTGCGATTCCAGGTGATGGAAAGATAATTGTTGTAGAGGCAGTATTGCCAATGATGGTTGAGACCACGAGTGCAGTGAAGTCCATCACCGAAGTCGATGTGCTTATGATGACTCAAAATTCAGGAGGAAAGAGCGAACTCGAGATGAATTCAAAGCCCTTGCAACTGCAGTTGGGTTTAAATACATCAAGTTTGAATGTTTTGTATGTAATCTTTGGCTCATGGAGTTCTTAA | 549 | 43.72 | MLNETTMGIKKIVESYKGFANLKQLVDVGGGLGVTLQIITSKYPSIEGINFDLPHVIRDAPAYPGVEHVGGNMFESVPRGEAIFLKWILHDWSDEHCMKLMKNCHAAIPGDGKIIVVEAVLPMMVETTSAVKSITEVDVLMMTQNSGGKSELEMNSKPLQLQLGLNTSSLNVLYVIFGSWSS | 182 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 13464794 | 13466772 | - | MC10g_new0296 | Mch10g1422 | 678515 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch10g1422 | 182 | Gene3D | Vaccinia Virus protein VP39 | 6 | 165 | IPR029063 | - | |
Mch10g1422 | 182 | PANTHER | O-METHYLTRANSFERASE | 1 | 154 | IPR016461 | GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER) | |
Mch10g1422 | 182 | Pfam | O-methyltransferase domain | 3 | 149 | IPR001077 | GO:0008171(InterPro) | |
Mch10g1422 | 182 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 1 | 182 | IPR016461 | GO:0008168(InterPro) | |
Mch10g1422 | 182 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 3 | 149 | IPR029063 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g1422 | Mch-Chr10:13464794 | Mch4g0880 | Mch-Chr4:6405874 | 1.04E-86 | dispersed | |
Mch10g1421 | Mch-Chr10:13443865 | Mch10g1422 | Mch-Chr10:13464794 | 6.44E-89 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch10g1422 | K13066 | - | csv:101214916 | 241.506 |