Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g1448 TTCGATTTCGGTTCCTTCAGCCTCAGAAACCTCACTCTCGTCGGCGATTCCCATCTCCGGGACGGCGTCATCGGCCTCACCAAGGAGCTCGGCGTCCCCTCCGCCGGCGCCGGCGCCGCCATTTACAACAACCCCATCGCATTCCGCGACGCCGTCTCCAACACCACCGCTTCTTTCTCCACAGCATTCTCCTTCTCCATCTCCAACGCCAACCCCACCTCTGCCGGCGCCGGCGACGGCTTCGCCTTCTTCCTCTCCGCCTATAACCAGACCCTCGGCAGCCCCGGCGGGTTCTTGGGCCTCGTCAATTCCTCTCAATTGACCAACAACAGGTTCGTGGCCGTCGAATTCGACACTCGCCTCGATTCCTACTTCCAGGATCCGGATTCCCACCATGTGGGTTTGGACATTGAGAGCCTGATCTCGATCAAGACGGCGGATCCTGCTTCTCAGGGGGTTGATCTCAAGAGTGGGAAGTGGATTACGGCTTGGATTGAGTACAAGAATGAGAAGTCTAATTTGAAGGTTTTCTTGAGCTATTCGAGTTCTAGGCCTAAGCGGCCGCTTCTTGATGTGAGTGTTGATCTTTCTGGGTATGTTGAGGATGTTATGTATGTGGGGTTTTCGGGTTCCACTGAAGGGAGTACTGAGCTTCATTTGATTCGGAGTTGGAGCTTTAATTCTTCTGGGTTTGTTCCTGCCATGCCTGGAGGATTCACCCCTCATAATGTTTCTGATAGCTCCGTGATTGTTTCCCCAAACATTTCTATATCTGATTCTGGCAATGCTCGTCACAGCAGGCTCGGGTTGGGTCTCGGGATCGCGGGACCGGCCTTCTTTTGTGCTGTGATTGCTGTGTTTGGTTTCTTGTCGCTTAAGAGGTGGAGGAAGATTAGAACTCAGAAGAGCTTCAAGGCAGAGCTTTTGACTGGCCCTAGAGAGTTCAGTTACAGGGAGCTGAGGACTGCCACTAAAGGGTTTCACTCCAGTAGGATCATTGGCAATGGAGCTTTTGGGACTGTCTACAAAGCTTTTTGCGTTTCCTCGGGAACCATTTCTGCGGTTAAGAGATCGAAACATTCCCACGAACACGAAGGGAAGACTGAGTTCCTGGCTGAGCTGTCGATCATAGCTCGGTTGAGACACAAGAATTTGGTTCAGCTCCAAGGTTGGTGCGTTGAGAAAGGCGAACTGCTTCTCGTTTACGACTTTATGCCGAATGGGAGCCTCGATAGGTTGCTTTACCAGGAAACTGGAGAAGCTAGCTTGCTAAACTGGTCTCACAGATACAATGTTGCTGTTGGGTTGGCCTCTGTACTGACATATCTCCATCAAGAATGTGAGCAGCAAGTCATCCACAGAGATATAAAGACTGGTAACGTACTGCTGGACGGGAACTTCAATGCGAGGTTGGGCGATTTCGGATTGGCGAAGCTCATGGATCATGACAAGAGCCCAGTTTCAACTCTAACTGCAGGAACAATGGGATACCTTGCGCCTGAGTACCTTCAGTATGGGAAAGCGACCGAGAAAACCGACGTCTTCAGCTACGGTGTGGTTATCCTCGAAGTGGCCTGTGGGAGGAGGCCGATCGAAAGAGAAGCAGGCACTCAAAAGATGGTCAATCTGGTAGACTGGGTTTGGGGACTGCATTCTCAAGGCAAGATCATCGAAGCAGCCGATAAAAGGTTGAATGGGGAGTTCAGGGAAGAAGAAATGAGGAAGCTGTTGCTTGTGGGATTGAGCTGTGCAAACCCAGATAGCTCGGTGAGGCCTTCGATAAGGAAGGTCCTGCAGATTCTCAACAACGAGGCAGAGCCGGTGTTCGTACCGAAAATGAAGCCTAGCCTAACATTTTCTTGTGGCCTATCACTGACTGTGGATGACATTATA 1893 51.24 FDFGSFSLRNLTLVGDSHLRDGVIGLTKELGVPSAGAGAAIYNNPIAFRDAVSNTTASFSTAFSFSISNANPTSAGAGDGFAFFLSAYNQTLGSPGGFLGLVNSSQLTNNRFVAVEFDTRLDSYFQDPDSHHVGLDIESLISIKTADPASQGVDLKSGKWITAWIEYKNEKSNLKVFLSYSSSRPKRPLLDVSVDLSGYVEDVMYVGFSGSTEGSTELHLIRSWSFNSSGFVPAMPGGFTPHNVSDSSVIVSPNISISDSGNARHSRLGLGLGIAGPAFFCAVIAVFGFLSLKRWRKIRTQKSFKAELLTGPREFSYRELRTATKGFHSSRIIGNGAFGTVYKAFCVSSGTISAVKRSKHSHEHEGKTEFLAELSIIARLRHKNLVQLQGWCVEKGELLLVYDFMPNGSLDRLLYQETGEASLLNWSHRYNVAVGLASVLTYLHQECEQQVIHRDIKTGNVLLDGNFNARLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATEKTDVFSYGVVILEVACGRRPIEREAGTQKMVNLVDWVWGLHSQGKIIEAADKRLNGEFREEEMRKLLLVGLSCANPDSSVRPSIRKVLQILNNEAEPVFVPKMKPSLTFSCGLSLTVDDII 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14161913 14163805 + MC10g1143 Mch10g1448 678541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g1448 631 ProSitePatterns Legume lectins beta-chain signature. 113 119 IPR019825 -
Mch10g1448 631 FunFam L-type lectin-domain containing receptor kinase VIII.1 405 619 - -
Mch10g1448 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch10g1448 631 SUPERFAMILY Protein kinase-like (PK-like) 310 618 IPR011009 -
Mch10g1448 631 Pfam Legume lectin domain 1 232 IPR001220 GO:0030246(InterPro)
Mch10g1448 631 Gene3D Transferase(Phosphotransferase) domain 1 405 620 - -
Mch10g1448 631 FunFam L-type lectin-domain containing receptor kinase VIII.1 1 238 - -
Mch10g1448 631 ProSiteProfiles Protein kinase domain profile. 327 609 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g1448 631 SUPERFAMILY Concanavalin A-like lectins/glucanases 1 235 IPR013320 -
Mch10g1448 631 SMART serkin_6 327 609 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g1448 631 Gene3D Phosphorylase Kinase; domain 1 297 404 - -
Mch10g1448 631 Pfam Protein kinase domain 327 599 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g1448 631 Gene3D - 1 233 - -
Mch10g1448 631 CDD lectin_legume_LecRK_Arcelin_ConA 1 230 IPR001220 GO:0030246(InterPro)
Mch10g1448 631 ProSitePatterns Protein kinases ATP-binding region signature. 333 356 IPR017441 GO:0005524(InterPro)
Mch10g1448 631 FunFam L-type lectin-domain containing receptor kinase VIII.1 291 404 - -
Mch10g1448 631 CDD STKc_IRAK 333 603 - -
Mch10g1448 631 PANTHER - 28 611 IPR050528 GO:0002229(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1448 Mch-Chr10:14161913 Mch5g1763 Mch-Chr5:18190556 1.04E-200 dispersed
Mch10g1448 Mch-Chr10:14161913 Mch5g1860 Mch-Chr5:18765416 5.32E-118 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77026 PF00069 Pkinase 4.30E-51 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g1448 - - - 0.0