Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g1456 ATGGGTTCTTGCCATTCGTCATCTGTAGGGCGGAGGAGGGGCGGCGATGACTGTCCTGCGCCGGCGGCGGCGGTTACTGAGGTTCCGGCGGCTTCTACAACGGCGTCTTTTTCTTCTTCTTCTTCGTCTTCTTCATTGTACCCTACGACCAGTAGGCAGCGGTGGTGGAAGAAGAAATCGAGTAAAACTCATGGGGTTGGGGTTTGTTCGGAGAAAATCCACGAATTCGAGGTTCCGGGGAGGATTTGTACTAATGGGTCATCGAGAATCGCATGTTTGTATACACAGCAGGGGAAGAAAGGGGTTAATCAAGACGCCATGATTGTACAGGAGAATTTCAATTCAAGAAGAGATACGGTGTTTTGTGGCGTATTTGACGGACATGGTCCTTTTGGACATATGGTTGCGAAAAAGGTTCGTGATACCCTCCCTCTTATCCTATGTACTCAATGGACATCTAAATCAGACGAAGATCAAAACAATCTCGTTGAGATGAGACATTCCAGAAGTTCAAATTCTGAAGATTCTATAGCTTTAGATGCCAATGATGATTGTTACAAGTCATTGGAGGCTGAAGAAAATGAAAAATTCCCCAAGATGTATCTGCCACTCAAAGTATCTTTACTGAAGTCCTTCAAATTAATGGATAAAGAGTTGAAACAACATCCTAAAATTGATTGTTTTTGCAGTGGGTCGACGGCTGTGACTCTAATAAAGCAGGGTCGGAACCTTGTAATTGGAAATGTTGGTGACTCAAGAGCGGTGCTGGCAACAAGAGACGAAGAAAACTCTTTGATACCGATTCAGTTAACAGTGGACTTGAAACCCGACCTTCCCGGTGAAGCTGCAAGGATCCAGCAATGCAAAGGAAGGGTCTTTGCTTTGCAGGATGAGCCTGAAGTTGCACGAGTATGGTTGCCTAATAACGATTCACCCGGGTTGGCGATGGCGAGAGCTTTCGGGGACTTCTGTCTAAAGGATTTTGGTCTAATTTCTGTTCCCGATGTTTACTATCGACAACTTACTGTGAGAGATCAGTTCATAATTCTTGCCACTGATGGGGTTTGGGACGTCCTCTCGAATAAGGAAGCTATTGAAATCGTGGCATCAGCCCCTTCTCGTGAAACAGCAGGAAGAGCTCTTGTCGACTGCGCCGTTCGTGCATGGAGACTGAAATATCCTACGTCCAAGAACGACGATTGTGCTGTTGTATGTCTTTTTCTCGAGTACGAGCCTGAAACAGAAGAGAACACAACAGCTTGTGCTAAAGCAACGGAAGAAGTTATGTCCACACCAGGAGATGACACTAAAGATGTCAAAGTTGATTCGAATCATAGAATGACGGTTCTTGAGCGCTCAGGTACCCTACAAGGGTGCAACGAGATCGTGCCTGTCAGTGACTCAAATGACGAGAAAGTCGCAGTCGGAGGCCGAAACACGTCAAAGAGAAGCTTAGCTGAGTGCATATCAAATGAAGAGGAGGAATGGTCTGCATTGGAAGGTATAACCAGAGTGAATAGTCTGTTAAGCCTGCCAAGGTTCTTATCTGGTGACAGAAGATCAGGCAGTTGGAGGAAGTGGCTATGA 1587 45.94 MGSCHSSSVGRRRGGDDCPAPAAAVTEVPAASTTASFSSSSSSSSLYPTTSRQRWWKKKSSKTHGVGVCSEKIHEFEVPGRICTNGSSRIACLYTQQGKKGVNQDAMIVQENFNSRRDTVFCGVFDGHGPFGHMVAKKVRDTLPLILCTQWTSKSDEDQNNLVEMRHSRSSNSEDSIALDANDDCYKSLEAEENEKFPKMYLPLKVSLLKSFKLMDKELKQHPKIDCFCSGSTAVTLIKQGRNLVIGNVGDSRAVLATRDEENSLIPIQLTVDLKPDLPGEAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDVYYRQLTVRDQFIILATDGVWDVLSNKEAIEIVASAPSRETAGRALVDCAVRAWRLKYPTSKNDDCAVVCLFLEYEPETEENTTACAKATEEVMSTPGDDTKDVKVDSNHRMTVLERSGTLQGCNEIVPVSDSNDEKVAVGGRNTSKRSLAECISNEEEEWSALEGITRVNSLLSLPRFLSGDRRSGSWRKWL 528
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14397752 14404866 + MC10g1148 Mch10g1456 678549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g1456 528 CDD PP2Cc 89 408 IPR001932 -
Mch10g1456 528 FunFam probable protein phosphatase 2C 33 85 411 - -
Mch10g1456 528 MobiDBLite consensus disorder prediction 29 48 - -
Mch10g1456 528 MobiDBLite consensus disorder prediction 1 22 - -
Mch10g1456 528 Pfam Protein phosphatase 2C 191 382 IPR001932 -
Mch10g1456 528 ProSiteProfiles PPM-type phosphatase domain profile. 90 408 IPR001932 -
Mch10g1456 528 Gene3D - 87 415 IPR036457 -
Mch10g1456 528 SUPERFAMILY PP2C-like 87 409 IPR036457 -
Mch10g1456 528 PANTHER PROTEIN PHOSPHATASE 75 407 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Mch10g1456 528 SMART PP2C_4 79 406 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1456 Mch-Chr10:14397752 Mch8g2467 Mch-Chr8:27594408 1.15E-161 dispersed
Mch10g1456 Mch-Chr10:14397752 Mch4g0169 Mch-Chr4:1134981 2.55E-141 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g1456 - - - 0.0