Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g1461 ATGTGGCTTCTTTTGGTTGGAGCTATTGTTGTTTTAAGTTTTACACACTGGCTTTATAGCTGGAGAAATCCCAAATGTAATGGAAAACTTCCACCAGGTTCAATGGGTTTCCCTCTACTTGGTGAAACCTTGCAGTTCTTTGCTCCCAATACCTCCTCTGATATTCCTCCTTTCATCAGAAGGAGAATGGATAGGTATGGACCGATATTCAGAACTAGTTTGGTGGGAAGGTCGTTGATTGTCTCAACAGACCCCGACTTGAATTACTTTATCTTCCAACAAGAGGGACAATTGTTCCAGAGCTGGTATCCAGATACCTTCACAGAGATATTTGGAAGACAAAATGTTGGTTCATTGCACGGTTTCATGTATAAATATCTTAAGAACATGGTTCTTCATCTTTTTGGATCTGAAACTCTGAGAAAGATGGTTCCTGAGGTTGAGGCTGTAGCAACCAGAAGATTGAGACAATGGTCATCTCATAACTCAGTTGAATTGAAGGATGAGACTGCAAGTATGATTTTTGATTTGACTGCAAAGAAGCTGATTAGTTATGATTCAGAAAATTCTTCGGAGAATTTGAGGGAGAATTTTGTTGCATTTATACAGGGGTTGATCTCCTTCCCTCTAGATGTTCCTGGAACCGCTTATCACAAATGCTTACAGGGCAGGAAAAGAGCGATGAGGATGCTGAAAAACATGTTACAAGAAAGGCGGGCAAATCCAAGGAAACAACAAATAGATTTTTTCGATTTCGTCCTCGAAGAACTGGAGAAAGATGGAACTCTTCTCACCGAGGAAATTGCTTTGGACCTTATGTTTGTGCTACTTTTTGCAAGCTTCGAAACTACTTCCCTTGCTATAACTGCAGCCATTAAATTTCTCCTTAACAACCCTCATGTGCTGGAGGAGTTGACGGTTGAGCATGATGGAATTTTGAAGGGAAGGGAAACTGCAGATTCTGGGCTTACGTGGGCAGAATACAAATCCATGACATTCACATTTCAGTTCATCAATGAAACTGTGAGACTGGCAAATATAGTTCCAGGAATCTTTCGAAAAGCTCTGAGAGATATCCAGTTTAAGGGATATACCATTCCAGCAGGGTGGGCTGTTATGGTCTGCCCTCCGGCCGTGCACTTAAATCCGCAAAAGTACACTGACCCCCTTGAATTTAACCCATGGCGATGGGAGAAATCTGAACTGAATGGAGCATCTAAACATTTCATGGCTTTTGGTGGAGGCATGAGATTCTGTGTTGGTACAGATTTTACCAAAGTGCAGATGGCTGTGTTTCTCCATTGCCTGGTTACAAAGTACAGGTTCAAAGCAATCAAAGGAGGCAATATCGTCCGAACTCCCGGTTTACAGTTTCCCGATGGCTATCACGTTCAGATCATGGAGAAGTAA 1410 41.99 MWLLLVGAIVVLSFTHWLYSWRNPKCNGKLPPGSMGFPLLGETLQFFAPNTSSDIPPFIRRRMDRYGPIFRTSLVGRSLIVSTDPDLNYFIFQQEGQLFQSWYPDTFTEIFGRQNVGSLHGFMYKYLKNMVLHLFGSETLRKMVPEVEAVATRRLRQWSSHNSVELKDETASMIFDLTAKKLISYDSENSSENLRENFVAFIQGLISFPLDVPGTAYHKCLQGRKRAMRMLKNMLQERRANPRKQQIDFFDFVLEELEKDGTLLTEEIALDLMFVLLFASFETTSLAITAAIKFLLNNPHVLEELTVEHDGILKGRETADSGLTWAEYKSMTFTFQFINETVRLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPQKYTDPLEFNPWRWEKSELNGASKHFMAFGGGMRFCVGTDFTKVQMAVFLHCLVTKYRFKAIKGGNIVRTPGLQFPDGYHVQIMEK 469
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 14513278 14516569 + MC10g1152 Mch10g1461 678554
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch10g1461 469 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Mch10g1461 469 Gene3D Cytochrome P450 22 468 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch10g1461 469 FunFam Cytochrome P450 family protein 22 468 - -
Mch10g1461 469 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch10g1461 469 PRINTS E-class P450 group I signature 335 353 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch10g1461 469 PRINTS E-class P450 group I signature 375 399 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch10g1461 469 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch10g1461 469 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch10g1461 469 PRINTS E-class P450 group I signature 288 314 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch10g1461 469 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch10g1461 469 SUPERFAMILY Cytochrome P450 27 465 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch10g1461 469 CDD CYP90-like 62 466 - -
Mch10g1461 469 PANTHER CYTOCHROME P450 26 29 440 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)
Mch10g1461 469 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch10g1461 469 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch10g1461 469 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch10g1461 469 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch10g1461 469 Pfam Cytochrome P450 31 451 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1461 Mch-Chr10:14513278 Mch4g2380 Mch-Chr4:24956251 1.08E-87 dispersed
Mch10g1461 Mch-Chr10:14513278 Mch9g0259 Mch-Chr9:1937654 6.09E-80 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g1461 - - - 0.0