Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g1478 ATGGCTGGTCGTATTTTTGAGACCTTGTCCTTTGGTGGGTCGCAACATGGTCAGGGTAACCAATCTTTGCCATTTTCATCTGCTAATGCATCATTGAAGTTTTTGCTCTTGCATGGTTATTTGGACATTTGGGTCAAGGAAGCCAAGAACCTTCCTAATTTGGATATGTTTCACAAGACTCTTGGAGATATGTTTTCGAGAGTATCTTTCAAGGGTTCAAAAAAGAGTGAAGGGCAAAAGTCTGAGAAAGTGACCAGTGATCCCTATGTGACGATTTCTGTATCAGGTGCTGTAGTTGGAAGAACTTTTGTGATTGATAATAATGAGAACCCTGTTTGGATGCAGCATTTTAATGTTCCTGTGGCTCATTATGGTGCTGAAGTGCACTTTGCTGTGAAAGATCATGATGTTGTGGGATCACAAATCATGGGTGTTGTTGCAATTCCAGTGGAGCAATTGTATTCTGGAACCAAAGTTGAGGGAACTTACCCAATCTTGAATAGCAGTAGGAAGCCTTGCAAGCCTGGGGCAGTCTTGAGTTTGTCAATTCAGTATGTTCCCGCGGACCAGGCGGCCATTTTTCAAGGTGGAATGTATGCGTCTCCTGATCACCAGGGGGTGTCTGGGACATATTTTCCCCTTAGGAAAGGGGGTAATGTTACATTGTACCAAGATGCCCATGTTGAGGATGGCTGTCTTCCAACCGATTTCAGGCTTCACGGCGGGGTTGGATATGAACATCGGAGCTGTTGGCACGACATCTCCGAAGCAATTAGTAACGCTCGCCGTTTAATCTATATTACGGGCTGGTCCGTATACCACAAAGTTGGACTTGTTAGAGATGGCAAGGACACAGAATGCATATTAGGGGACCTTCTCAAAGCCAAGTCACAAGAAGGAGTAAGAGTATTGCTCCTCATATGGGACGATCCAACTTCAACGAGTATGTTGGGATATAAAACGGTTGGTATGATGAATACGAATGATGAGGAGACTCGTCGGTTTTTTAAGAACTCCTCAGTCCAAGTGATTTTATGTCCGCGATCGGGTGGAAAAGGTCATAGCTGGATTAAAAAACAGGAAGCTGGAACCATCTATACCCACCATCAGAAGACAGTTATTGTGGATGCTGATGCTGGCAATTACAAAAGAAAAATTGTGGCTTTTGTTGGAGGTCTTGATTTATGCTTCGGCCGATACGATACTTCGAGACATCCTATTTTCAGGACATTGCAAACTACACACATTGATGACTATCATAATCCTAATTTTACGGGACCAACTGATGGCTGCCCAAGAGAACCATGGCATGATTTGCACTCTAAAATCGACGGGCCAGCGGCATACGACGTCCTTGCAAATTTTGAGGAGCGCTGGTTGAGAGCCTCGGAGCCTCATGGGCTTAAAAAGCTAAAAAAGTTAAATGATGATGTATTGCTCAAAATTGAAAGAATTCCTGAAATTTTGGGAATTGCTGATGTTTCTCGATTGTGTAGTAATGATCCAGAAGCTTGGAACGTCCAGGTTTTTCGCTCAATTGATTCCAATTCCGTGAAAGGATTTCCTACCAATCCAAAAGATGCTATAAGTAGGAACTTAGTATGTGGAAAAAATGTCATGATTGACATGAGTATACACTCAGCATACGTTAGTGCGATTCGTGCTGCTCAACGCTTCATTTATATCGAAAACCAATACTTCCTTGGCTCGTCATATAATTGGAGTGCTCACAAAGACTTGGGGGCTAATAACTTAATACCAATGGAAATTGCCCTTAAAATTGTGGAGAAAATCAAAGCTAAAGAAAGGTTTTCGGCATACGTGGTTATCCCTATGTGGCCAGAAGGTGTTCCTACAAGCACTCCTATTCAAAGAATTCTTTACTGGCAGAGTAGGACAATGCAAATGATGTATGAAATGATATACAAGGCTTTAGAGGAGGTTGGACTTCACAAAATATATGAGCCTCAAGACTACCTGAATTTCTTTTGCCTCGGAAATCGTGAGGTGCTCGATGTCAGAGACGGTGTTGAAGCCGGGAACGGAGAGAAGAATCCTCAAGCACTTGTTCGCAAGAGTCGACGTTTTATGATCTACGTTCATTCAAAAGGAATGATAGTAGACGACGAGTACGTCATATTGGGATCAGCAAATATCAATCAGCGGTCGCTTGAAGGTACAAGAGACACCGAAATAGCAATGGGGGCATATCAGCCTCGCCATACATGGTCGTCAAGCAAACGGTCAAGCCCACGCGGTCAGGTCTATGGATACAGAATGTCATTATGGGCAGAGCACACGGGGACTATTGAGGAATGTTATGAGAGGCCAGAGAGTATTGAATGTGTTAGAAGAATCAGATCATTGGGTGAGAGAAACTGGAGACAATTTGCAGCTGAGGAAGTGACTGAAATGAGAAGTCATCTTCTCAAATATCCACTCCAAGTTGATTCTACAGGTAAGATCACTCATCTTCCTGGTCAAGAAACCTTCCCTGATCTTGGTGGCAACATATTGGGAACATTCGTTGCCATCCAAGAAAATCTCACAATTTGA 2556 43.08 MAGRIFETLSFGGSQHGQGNQSLPFSSANASLKFLLLHGYLDIWVKEAKNLPNLDMFHKTLGDMFSRVSFKGSKKSEGQKSEKVTSDPYVTISVSGAVVGRTFVIDNNENPVWMQHFNVPVAHYGAEVHFAVKDHDVVGSQIMGVVAIPVEQLYSGTKVEGTYPILNSSRKPCKPGAVLSLSIQYVPADQAAIFQGGMYASPDHQGVSGTYFPLRKGGNVTLYQDAHVEDGCLPTDFRLHGGVGYEHRSCWHDISEAISNARRLIYITGWSVYHKVGLVRDGKDTECILGDLLKAKSQEGVRVLLLIWDDPTSTSMLGYKTVGMMNTNDEETRRFFKNSSVQVILCPRSGGKGHSWIKKQEAGTIYTHHQKTVIVDADAGNYKRKIVAFVGGLDLCFGRYDTSRHPIFRTLQTTHIDDYHNPNFTGPTDGCPREPWHDLHSKIDGPAAYDVLANFEERWLRASEPHGLKKLKKLNDDVLLKIERIPEILGIADVSRLCSNDPEAWNVQVFRSIDSNSVKGFPTNPKDAISRNLVCGKNVMIDMSIHSAYVSAIRAAQRFIYIENQYFLGSSYNWSAHKDLGANNLIPMEIALKIVEKIKAKERFSAYVVIPMWPEGVPTSTPIQRILYWQSRTMQMMYEMIYKALEEVGLHKIYEPQDYLNFFCLGNREVLDVRDGVEAGNGEKNPQALVRKSRRFMIYVHSKGMIVDDEYVILGSANINQRSLEGTRDTEIAMGAYQPRHTWSSSKRSSPRGQVYGYRMSLWAEHTGTIEECYERPESIECVRRIRSLGERNWRQFAAEEVTEMRSHLLKYPLQVDSTGKITHLPGQETFPDLGGNILGTFVAIQENLTI 851
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14736686 14743842 + MC10g1164 Mch10g1478 678571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g1478 851 ProSiteProfiles C2 domain profile. 15 163 IPR000008 -
Mch10g1478 851 SMART pld_4 364 399 IPR001736 GO:0003824(InterPro)
Mch10g1478 851 SMART pld_4 696 723 IPR001736 GO:0003824(InterPro)
Mch10g1478 851 FunFam Phospholipase D delta 241 478 - -
Mch10g1478 851 PIRSF PLD_plant 26 851 IPR011402 GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro)
Mch10g1478 851 FunFam Phospholipase D 512 742 - -
Mch10g1478 851 SUPERFAMILY Phospholipase D/nuclease 207 463 - -
Mch10g1478 851 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 364 399 IPR001736 GO:0003824(InterPro)
Mch10g1478 851 SMART C2_3c 40 162 IPR000008 -
Mch10g1478 851 FunFam Phospholipase D delta 34 181 - -
Mch10g1478 851 SUPERFAMILY Phospholipase D/nuclease 545 782 - -
Mch10g1478 851 CDD C2_plant_PLD 35 186 - -
Mch10g1478 851 Gene3D Endonuclease Chain A 243 478 - -
Mch10g1478 851 Gene3D Endonuclease Chain A 508 759 - -
Mch10g1478 851 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 696 723 IPR001736 GO:0003824(InterPro)
Mch10g1478 851 Pfam Phospholipase D C terminal 771 841 IPR024632 -
Mch10g1478 851 Pfam C2 domain 39 164 IPR000008 -
Mch10g1478 851 PANTHER PHOSPHOLIPASE D 36 839 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Mch10g1478 851 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 37 187 IPR035892 -
Mch10g1478 851 Gene3D C2 domain 25 186 IPR035892 -
Mch10g1478 851 Pfam Phospholipase D Active site motif 698 723 IPR001736 GO:0003824(InterPro)
Mch10g1478 851 Pfam Phospholipase D Active site motif 366 399 IPR001736 GO:0003824(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1478 Mch-Chr10:14736686 Mch8g0878 Mch-Chr8:6261288 1.15E-300 dispersed
Mch10g1478 Mch-Chr10:14736686 Mch7g0737 Mch-Chr7:11966031 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g1478 K01115 - csv:101208016 1597.41