Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g1499 ATGGCGGAATCAACCACAAAACACCTTCAATTTTTCCTCTTCATCCTCTTCCCCATAGCTCTCGCCGCTTCTCCGGCGGATCTCGCCCACACCCAATGCTTGAAGGTCTCCTCGTCGGAGTTCTCCAGCTCCATCGTCTCCGCCATCGATGTCGTCCGGCAGGTCGCCGCCATTTTCTCCCCGTTCGCCAAATTACTCGGCGATTCCCGCCTCGCCACCGCCATCTCCGATTGCCTCGACTTGCTCAACTCCTCCGCCGACCAGCTGGACTGGTCCCTTTCCGCCGCCCGGAACCCCACCGGGAAAAACAACAGCACCGGCGATCTGACCTCCGATCTCCGAACATGGCTGAGCGCGGCGGCCGTCAACCCAGAAACATGTCTGGACGGATTCGACGGCACCAACAGCATCGTCAAAGGATTGGCGTCCGCCGGAATCGCCCAGCTGACATCGGAGATCTCTGAGCTTCTTTCCATGGTGAAATCGGTCTCCGGCCAGGCGGCGGAGTTTCCGTCGTGGGTCAAACCGGAGGATCGGAAGCTGCTGCAGGGAGGTGGGTTGGCCGCCGACGCCACCGTGGCCGCCGACGGGACAGGGGATTTCACGACGGTGATGGATGCGGTGGCGGCGGCGCCCGACAACAGCATGCGGCGGTATGTGATTTACATAAAGAGAGGGGTGTATTTGGAGAACGTGGAGATCAAAAAGAAGAAATGGAATCTGGTGATGATTGGGGACGGAATTGATTCCACCATTATTTCCGGTAATCGGAGCTTTGTCGACGGCTGGACCACATTCCGCTCTGCAACATTCGCTGTTAGCGGGAGAGGATTCATAGCGCGCGATATAACATTCGAGAACACCGCCGGACCGGAGAAGCACCAAGCGGTGGCGCTGAGATCCGACTCCGATCTCTCGGTGTTCTTCAGATGCCGCATTAGAGGCTACCAAGACACCCTTTACACCCACACGATGCGCCAATTCTTCCGCGACTGCTACATCAGCGGCACCGTCGACTTCATTTTCGGCGATGCCACCGCCGTCTTCCAGAACTGCACCATCCTCGCCAAGAAGGGCCTCCCCAACCAGAAAAACACCATCACCGCGCAGGGCCGGAAGGACCCCAATCAGCCCACCGGATTCTCCCTTCAGTTCTGCAACATCTCTGCGGATTCCGACCTTCTGGGCTCCGTCAACACCACTGCCACGTACCTGGGCCGGCCCTGGAAGGAGTATTCGAGGACCGTTGTGATGCAGTCGTACATTAGCGGCGCCATTCGGCCGGAGGGTTGGCTCGAGTGGAGCGGCGATTTTGCACTGAATACTCTGTTTTACGCGGAGTTTATGAACTATGGGGCTGGGGCGGGGCTGGGGAAGCGGGTCAATTGGCCGGGGTTTCACCGGCTGAATCAGACGAGTGAAGCCGCGAACTACACGGTGGCGGAATTTATTGAGGGGAATCTATGGTTGCCGGCAACCGGCGTCAGATTCTCTGCGGGCTTGGGAGCTAATTAA 1515 58.35 MAESTTKHLQFFLFILFPIALAASPADLAHTQCLKVSSSEFSSSIVSAIDVVRQVAAIFSPFAKLLGDSRLATAISDCLDLLNSSADQLDWSLSAARNPTGKNNSTGDLTSDLRTWLSAAAVNPETCLDGFDGTNSIVKGLASAGIAQLTSEISELLSMVKSVSGQAAEFPSWVKPEDRKLLQGGGLAADATVAADGTGDFTTVMDAVAAAPDNSMRRYVIYIKRGVYLENVEIKKKKWNLVMIGDGIDSTIISGNRSFVDGWTTFRSATFAVSGRGFIARDITFENTAGPEKHQAVALRSDSDLSVFFRCRIRGYQDTLYTHTMRQFFRDCYISGTVDFIFGDATAVFQNCTILAKKGLPNQKNTITAQGRKDPNQPTGFSLQFCNISADSDLLGSVNTTATYLGRPWKEYSRTVVMQSYISGAIRPEGWLEWSGDFALNTLFYAEFMNYGAGAGLGKRVNWPGFHRLNQTSEAANYTVAEFIEGNLWLPATGVRFSAGLGAN 504
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14955190 14958376 + MC10g1184 Mch10g1499 678592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g1499 504 FunFam Pectinesterase 185 501 - -
Mch10g1499 504 SUPERFAMILY Pectin lyase-like 187 500 IPR011050 -
Mch10g1499 504 Gene3D - 187 503 IPR012334 -
Mch10g1499 504 Gene3D Invertase/pectin methylesterase inhibitor family protein 22 165 IPR035513 -
Mch10g1499 504 PANTHER PECTINESTERASE 41 492 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Mch10g1499 504 CDD PMEI-like_4 12 164 - -
Mch10g1499 504 ProSitePatterns Pectinesterase signature 2. 334 343 IPR033131 -
Mch10g1499 504 SMART PMEI_2 24 159 IPR006501 GO:0004857(InterPro)
Mch10g1499 504 Pfam Plant invertase/pectin methylesterase inhibitor 45 158 IPR006501 GO:0004857(InterPro)
Mch10g1499 504 Pfam Pectinesterase 190 487 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Mch10g1499 504 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 48 161 IPR035513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1499 Mch-Chr10:14955190 Mch9g0697 Mch-Chr9:5247033 1.73E-148 dispersed
Mch10g1499 Mch-Chr10:14955190 Mch6g1850 Mch-Chr6:21011905 6.83E-144 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g1499 K01051 - csv:101207185 819.69