Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch10g1504 | ATGGAGGGAGGAGAAGGCGATGCCGGAAGTGGGGCTGCGGCGGCCCGATCAGATACTCCGATGGTGGGGACGGCGGCTCCGGCGCCGGAAGTGGGCGGTCAGGTGGGTGCGGCGGCGGTGGGGAAGAAGAAGAGGGGGAGGCCGAGGAAGTATGGGCCGGATGGGAAGTTGAATGTGGCGGCGCTGTCGCCGAAGCCGATATCGGCGTCGGCGCCGGCACAGGCGGCGGCGGTGATTGATTTCGCGGCGGAGAGACGAGGGAGAATCCGGCCGGCGGGATTGCTGAGCAAAACCAAGTTCGAAATGGAGAATTTAGGTGAATGGGTAGCTTGTTCTGTTGGTGCAAATTTCACTCCCCATATCATCACTGTCAATACCGGTGAGGACGTTACAATGAAAGTTCTCTCCTTTTCTCAACAAGGGCCACGAGCCATCTGCATTCTCTCCGCGAACGGCATAATTTCGAGCGTCACGCTTCGTCAACCCGATTCCTCTGGAGGAACATTAACATATGAGGTCGGTCGTTTCGAGATATTGTCATTGTCGGGATCGTTCATGCCGAACGATCGTGCGGGAACCAAGAGTAGATCCGGTGGGATGAGTGTTTCTTTAGCGAGTCCCGACGGGCGCATCGTTGGTGGTGGAGTTGCTGGTTTGTTAGTAGCTGCAACTCCTATTCAAGTGGTAGTAGGAAGCTTCTTGTCTGGGAACCAACATGAGCAAAAGCCAAAGAAACCGAAACAGGACGTCATATTACCGGTTTCTGCTCTCCCAATCTCCAGTGCTGAACCCAAATCATACACGACGACAACAACGACAACAACACCGACAACAACGTCTTCGTTTCGTGCCGAGACTTGGTCCCCTTTGGTTCCAGATTTGAGAAGGCAGCCAACTGATATCAATGTATCTCTAACCAGTGGTTAA | 927 | 54.37 | MEGGEGDAGSGAAAARSDTPMVGTAAPAPEVGGQVGAAAVGKKKRGRPRKYGPDGKLNVAALSPKPISASAPAQAAAVIDFAAERRGRIRPAGLLSKTKFEMENLGEWVACSVGANFTPHIITVNTGEDVTMKVLSFSQQGPRAICILSANGIISSVTLRQPDSSGGTLTYEVGRFEILSLSGSFMPNDRAGTKSRSGGMSVSLASPDGRIVGGGVAGLLVAATPIQVVVGSFLSGNQHEQKPKKPKQDVILPVSALPISSAEPKSYTTTTTTTTPTTTSSFRAETWSPLVPDLRRQPTDINVSLTSG | 308 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 15008879 | 15011488 | + | MC10g1188 | Mch10g1504 | 678597 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch10g1504 | 308 | CDD | DUF296 | 118 | 233 | IPR005175 | - | |
Mch10g1504 | 308 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 116 | 238 | - | - | |
Mch10g1504 | 308 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 119 | 233 | IPR005175 | - | |
Mch10g1504 | 308 | Gene3D | - | 119 | 249 | - | - | |
Mch10g1504 | 308 | MobiDBLite | consensus disorder prediction | 1 | 54 | - | - | |
Mch10g1504 | 308 | ProSiteProfiles | PPC domain profile profile. | 114 | 258 | IPR005175 | - | |
Mch10g1504 | 308 | MobiDBLite | consensus disorder prediction | 262 | 285 | - | - | |
Mch10g1504 | 308 | FunFam | AT-hook motif nuclear-localized protein 1-like | 119 | 250 | - | - | |
Mch10g1504 | 308 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 31 | 270 | IPR039605 | GO:0003680(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g1504 | Mch-Chr10:15008879 | Mch6g2581 | Mch-Chr6:27682019 | 2.72E-131 | dispersed | |
Mch7g0683 | Mch-Chr7:11542434 | Mch10g1504 | Mch-Chr10:15008879 | 2.26E-67 | transposed | |
Mch10g1504 | Mch-Chr10:15008879 | Mch7g0752 | Mch-Chr7:12143320 | 2.12E-20 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch10g1504 | - | - | - | 0.0 |