Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g1634 ATGGGAAGCGGAGTTTCCACCCTCTTCTCCTGCCTCAAACCGGATACCAGAACCACCGCCGCCGCCCATCATCATCCCGACAACCACGACCTCCTTTTCGCCGCCGCCGACCACTTGGACGAAACCCTAGGCCACTCCTTCTGCTACGTCCGCTCCTCCAATCGCTTCCTCTCTCCCACTCATTCCGATCGCTTTCTTTCTCCTTCTCAGTCGCTCCGTTTCTCGCCTCCCCACGACCCGGGGTTGTCCAGGACCCGACCCGGGCCGCCCGAGACCGGCTTCAGGGCCATCTCCGGAGCCTCCGTCAGTGCCAACAGTTCTATTCCCAGATCTGTCCTTCTGCTTGATAATATTTACGATGATGCCACTGAGGCTGCTGCTGGCGGAGTCCGGGGGAGTATTTTGAATGGCTTTGAGAGTACTTCTTCTTTCACTGCTCTGCCACTGCAGCCGGTGCCGAGGGGCGGTGCTACTGCTGACCCTTCTGGCCCCATGGAGCGCGGCGGCTTCTTTCTCTCCGGCCCAATTGAGCGCGGCGCGCTCTCCGGCCCACTTGATGCCAACGCTGCTGCGGACGGTGGTGGTGGTGGCGGGAGAGTTCATTTCTCGGCTCCGCTTGGGGGGCTTTACGTGAAGAAGAAGCGGAAGAAGGGCATTTCTGGGTTCCGGAAGGCGTTTACTCGGAACTTCTCTGAGAAACGGCCGTGGGTGGTGCCGGTACTGAATTTCGTTGGCCGGAAGGAGAGCTCGACGGCTGGAGACGAGCCAGAGGCGAGGACTGAGAGTAATGTTCAATGGGCGCTGGGCAAGGCGGGTGAGGATCGGGTACATGTGGTCGTGTCGGAAGAGCAAGGGTGGTTGTTTGTTGGGATTTATGATGGGTTCAATGGGCCTGATGCTCCCGAATTCTTGATGGGAAATCTCTACCGGGCAGTGTTCAATGAGCTTCAGGGTTTGTTCTGGGAGATTGATGATAGTGAGGAGGCTGCTAATTCAAACCCTTCCAATGTTGTTTCAGAGAGTACGGTCAATGTGGATGAAACGAATGCTGACCCATCTACGAGAGCCTCTGCTCAAGCGGTTGAAACTAATGGTAATGTTTCACTAGCGGGAAATGAAGCGGACCAACCAGCAGCTGATCGAGGATCGGCTAAGAGGGTTACATTTCAATCCGAGGATGGATCGGAGAATAGACGGCGGCGTCGGCTTTGGGAGTTTTTGGCAGAGGACGATAGCCAGGATGGACTTGATCTTTCAGGTTCGGATAGATTTGCATTTTCGGTTGATGATGCGCTTAGTGTAAATAGTGCAGGTTCAGTAGCTGGTAGAAGGTGGCTGTTATTGTCCAAGTTAAAACAAGGGTTGTCAAAGCATAAGGAGGGTCATGTTAAGACTTTGTTCCCGTGGAAGTATGGTTTGGAAGATAAAGAGAAGGTTGAGGCTGAGAACAGGGTAGAGGAGACCTCTTATAAAAGTGGTAAGAGGAGAAAGGAAGGTTTGATTGATCACGAGTTGGTTTTGGGGGCAGTATCACGGGCTCTTGAGATAACTGAATTAGCATATTTGGATATGACGGATAAGTTGCTCGATACGAATCCAGAGCTTGCTTTGATGGGTTCTTGCTTGCTGGTTGTGTTAATGAGGGATGAAGATGTGTATGTAATGAATGTGGGTGACAGCCGTGCCATTGTTGCGCAGTACGAGGAACAAGAAGTTGGCCCAAGTGAAGACTTGAAAGAGGAGAGTGACAAAAGGACGTGCATGGAGGGCATAATTGAGGAGTCTACAGCTCCGAGTGAAGGGAAAACAATTCAAGGGAACCAACCTTCGGCTCAGAAAACGAGATTAACTGCGTTGCAGCTGTCCACCGATCATAGCACGAGCATTGAAGAAGAAGTAAGAAGAATAAAGAATGAGCACCCTGATGACAAACAATGCATTGTCAATGATAGAGTGAAGGGCCGTCTAAAGGTCACGAGGGCATTTGGTGCAGGATTTTTGAAACAGCCAAAGTTGAATGATGCATTACTGGAAATGTTTCGGAATGAGTATATTGGCACCGCACCATATTTATCATGCTCGCCTTCTCTTCGTCACCATAGACTCTGCACCACAGATCAATTCATAGTGCTCTCATCTGATGGTTTGTATCAATATCTAACCAATGAAGAAGTGGTTTCTTATGTTGAGAATTTTATGGAGAAGTTTCCGGATGGAGACCCTGCACAGCACTTGATTGAGGAGCTTCTTTGCCGTGCAGCCAGAAAAGCAGGAATGGATTTTCATGAATTGTTGGACATCCCACAGGGGGATCGCAGAAAGTATCATGATGATGTTACTGTTATGGTCATTTCACTTGAAGGAAGAATCTGGAAATCCTCAGGAAAATATCTTTGA 2397 50.27 MGSGVSTLFSCLKPDTRTTAAAHHHPDNHDLLFAAADHLDETLGHSFCYVRSSNRFLSPTHSDRFLSPSQSLRFSPPHDPGLSRTRPGPPETGFRAISGASVSANSSIPRSVLLLDNIYDDATEAAAGGVRGSILNGFESTSSFTALPLQPVPRGGATADPSGPMERGGFFLSGPIERGALSGPLDANAAADGGGGGGRVHFSAPLGGLYVKKKRKKGISGFRKAFTRNFSEKRPWVVPVLNFVGRKESSTAGDEPEARTESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGNLYRAVFNELQGLFWEIDDSEEAANSNPSNVVSESTVNVDETNADPSTRASAQAVETNGNVSLAGNEADQPAADRGSAKRVTFQSEDGSENRRRRRLWEFLAEDDSQDGLDLSGSDRFAFSVDDALSVNSAGSVAGRRWLLLSKLKQGLSKHKEGHVKTLFPWKYGLEDKEKVEAENRVEETSYKSGKRRKEGLIDHELVLGAVSRALEITELAYLDMTDKLLDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAQYEEQEVGPSEDLKEESDKRTCMEGIIEESTAPSEGKTIQGNQPSAQKTRLTALQLSTDHSTSIEEEVRRIKNEHPDDKQCIVNDRVKGRLKVTRAFGAGFLKQPKLNDALLEMFRNEYIGTAPYLSCSPSLRHHRLCTTDQFIVLSSDGLYQYLTNEEVVSYVENFMEKFPDGDPAQHLIEELLCRAARKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 798
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 16478906 16487830 + MC10g1298 Mch10g1634 678727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g1634 798 MobiDBLite consensus disorder prediction 328 371 - -
Mch10g1634 798 MobiDBLite consensus disorder prediction 146 165 - -
Mch10g1634 798 Gene3D - 243 793 IPR036457 -
Mch10g1634 798 SUPERFAMILY PP2C-like 269 787 IPR036457 -
Mch10g1634 798 ProSiteProfiles PPM-type phosphatase domain profile. 257 786 IPR001932 -
Mch10g1634 798 MobiDBLite consensus disorder prediction 67 92 - -
Mch10g1634 798 SMART PP2C_4 257 784 IPR001932 -
Mch10g1634 798 Pfam Protein phosphatase 2C 511 570 IPR001932 -
Mch10g1634 798 Pfam Protein phosphatase 2C 619 749 IPR001932 -
Mch10g1634 798 CDD PP2Cc 497 786 IPR001932 -
Mch10g1634 798 MobiDBLite consensus disorder prediction 327 393 - -
Mch10g1634 798 PANTHER PROTEIN PHOSPHATASE 2C 265 786 IPR015655 GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1634 Mch-Chr10:16478906 Mch1g0718 Mch-Chr1:11098233 5.83E-142 dispersed
Mch10g1634 Mch-Chr10:16478906 Mch2g0902 Mch-Chr2:6129808 4.62E-151 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g1634 - - - 0.0