Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch10g1678 | ATGGTTTCGAGGTCTTATTCAAACTTGTTAGAGCTTGCTTCTGGTGGTTGTTCTCCAACTTTTGGGCTTGGCCGAGAGAAGAAGAGGCTACCTAGAGTGGCCACTGTGGCTGGAGTCTTGTCTGAGCTTGACGATGATGGCTGCAACAGCACTGGCTCCGATGCCCCTTCGTCGGTATCGCAAGACCGAATGATCATCGTTGGGAACCAGCTCCCGATTCGAGCGCATCGAGATGAGAATGGAGATTGGGGGTTTAGTATGGATGAGGATTCACTTCTCTTGCAGCTTAAAGATGGGCTTGGAGAAGATGTGGAAGTGATTTACATTGGTTGTCTTAGAGAGGAGGTTGATCCGAGGGAGCAAGATGATGTTGCACAAACTCTTCTCGATCGGTTCAAGTGCGTCCCGACGTTCCTCCCTCCGGAGCTGTTTAGTAAATTTTATCATGGATTCTGCAAGCAACATTTGTGGCCTCTGTTTCACTACATGCTTCCTCTGTCACCGGATCTTGGTGGACGATTTGATCGGTCTCTTTGGCAAGCGTATCTTTCTGTGAATAAGATATTTGCAGACAAAGTAATGGAAGTGATTAGCCCTGACGATGACTTTGTTTGGGTTCATGATTACCATTTGATGGTTTTGCCAACATTTTTGAGGAAGAGGTTTAACAGGGTGAAGCTTGGATTCTTCCTACACAGTCCATTTCCTTCATCCGAGATCTATCGAACCCTTCCCGTAAGAGATGAACTTCTTCGGGCACTATTAAATGCTGATCTTATTGGCTTCCACACGTTTGATTATGCGAGGCACTTTTTGTCTTGCTGCAGCAGAATGCTTGGTCTGTCTTATCAATCTAAGCGAGGTTACATCGGGCTTGAATACTACGGTCGAACTGTGAGCATCAAGATTCTTCCTGTTGGTATTCATATAGGCCAGCTCCAGAATGTGTTAAATCTCCCAGAGACTGTATCCAAAGTCGCAGAATTGCAAGATCGGTTTAGGGGTCAGACTGTTTTGCTTGGGGTTGATGACATGGACATATTTAAAGGGATCAGCCTGAAACTTTTGGCATTTGAACAATTGCTCCGACAACATCCCGAGAGATGGGGTGAAGCTGTTTTAGTACAGATTGCAAATCCTGCAAGAGGAAGAGGGAAAGACGTACAGGAGGTTGTTGCTGAAACTACTGCGACCGTGAATAGAATCAATGCGACGTTCAAAAGGCCAGGATACGAGCCTGTGGTTTTGATTAACACTCCCTTGCAGTTTTATGAGCGAATTGCATACTACGCAATTGCTGAGTGCTGCCTCGTTACCGCAGTGAGGGATGGGATGAACCTTATACCTTATGAATATATTATATGTCGACAAGGCAACGAGAAGCTTGACAGTGTTCTTGGGCTGAATCCTTCAAATGCAAAGAAGAGCATGCTAGTGTTGTCTGAGTTTATTGGGTGTTCTCCATCCCTCAGCGGGGCTATTCGGGTTAACCCATGGAATATCGAAGCTGTCACTGAAGCAATGGATACTGCCCTGGTAATCCCTGAGGCAGAAAAGCAATTGCGACATGAGAAGCATTATCGGTACGTTAGTACACATGATGTTGCGTACTGGGCACGCAGCTTTTTGCAGGACCTGGGCAGGGCCTGCAGAGACCATTCTATGAGGAGGTGCTGGGGTATAGGTTTCGGTTTAGGATTTCGAGTTATCGCGCTGGATCCAAATTTTAGGAAGCTTTCAGTTGATCATATTGTCTCGGTGTATAAGAGAACCTGCCACCGGGCAATCTTGTTAGATTATGATGGTATCATGACGCTTCCAGGCTCAATTAGCATGAATCCAACTTCTGAAGCCATAGGAGTCTTGAACAATTTGTGTAAAGATCCTAAGAATGTCGTGTTCCTTGTTAGTGGAAAGGACCGAAAAACTCTGACTGAATGGTTTTCACCATGCGAAAAGCTCGGACTAGCTGCAGAACACGGTTATTATCTGAGGTCAAATCATACCGCAGATTGGGAGACAAGTGTAGGTGTGACAGATTTCGACTGGAAACAGATTGCAGAACCTGTTATGCAATTGTATACCGAGACAACTGATGGCTCTGCAATTGAAACTAAGGAGAGTGCTCTTGTTTGGAACTACCTTTATGCGGATCCTGATTTTGGGTCGTGCCAGGCCAAGGAACTTTTAGATCACCTGGAAAGTGTTCTTGCCAATGAGCCAGTTTCTGTCAAGAGTGGCCAACATATTGTAGAAGTCAAACCTCAGGGTGTAAACAAGGGTATTGTAGCAGAATCTCTCTTGCAAACAATGAGGGAGAGAGGAATGCTTCCCGACTTCGTTCTATGCATCGGAGACGACAGGTCAGATGAGGATATGTTCGAGGTGATAACAAGTGCAAAGCCCACTCTTCCTCCTGGTGCTGAGGTGTTCGGTTGCACAGTTGGCCAGAAACCGAGCAAGGCCAAGTATTACTTGGAAGACACACACGAAATCTTGAGAATGTTACAAGGTCTCACCCATGCGTCGGAGCATGCTGCTCGAGCCGCACCACAGACGACGCCTCATAGGGTGGTAATTGCAGAGAGTAAATAA | 2595 | 46.09 | MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDGCNSTGSDAPSSVSQDRMIIVGNQLPIRAHRDENGDWGFSMDEDSLLLQLKDGLGEDVEVIYIGCLREEVDPREQDDVAQTLLDRFKCVPTFLPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYLSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGLSYQSKRGYIGLEYYGRTVSIKILPVGIHIGQLQNVLNLPETVSKVAELQDRFRGQTVLLGVDDMDIFKGISLKLLAFEQLLRQHPERWGEAVLVQIANPARGRGKDVQEVVAETTATVNRINATFKRPGYEPVVLINTPLQFYERIAYYAIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDSVLGLNPSNAKKSMLVLSEFIGCSPSLSGAIRVNPWNIEAVTEAMDTALVIPEAEKQLRHEKHYRYVSTHDVAYWARSFLQDLGRACRDHSMRRCWGIGFGLGFRVIALDPNFRKLSVDHIVSVYKRTCHRAILLDYDGIMTLPGSISMNPTSEAIGVLNNLCKDPKNVVFLVSGKDRKTLTEWFSPCEKLGLAAEHGYYLRSNHTADWETSVGVTDFDWKQIAEPVMQLYTETTDGSAIETKESALVWNYLYADPDFGSCQAKELLDHLESVLANEPVSVKSGQHIVEVKPQGVNKGIVAESLLQTMRERGMLPDFVLCIGDDRSDEDMFEVITSAKPTLPPGAEVFGCTVGQKPSKAKYYLEDTHEILRMLQGLTHASEHAARAAPQTTPHRVVIAESK | 864 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 16832707 | 16837305 | - | MC10g1333 | Mch10g1678 | 678771 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch10g1678 | 864 | Pfam | Glycosyltransferase family 20 | 63 | 546 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
Mch10g1678 | 864 | SUPERFAMILY | HAD-like | 594 | 839 | IPR036412 | - | |
Mch10g1678 | 864 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 593 | 710 | - | - | |
Mch10g1678 | 864 | Gene3D | Glycogen Phosphorylase B; | 315 | 531 | - | - | |
Mch10g1678 | 864 | FunFam | Alpha,alpha-trehalose-phosphate synthase | 316 | 531 | - | - | |
Mch10g1678 | 864 | Gene3D | Glycogen Phosphorylase B; | 56 | 314 | - | - | |
Mch10g1678 | 864 | NCBIfam | trehalose-phosphatase | 593 | 840 | IPR003337 | GO:0005992(InterPro) | |
Mch10g1678 | 864 | FunFam | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 723 | 852 | - | - | |
Mch10g1678 | 864 | CDD | GT20_TPS | 63 | 546 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
Mch10g1678 | 864 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 63 | 550 | - | - | |
Mch10g1678 | 864 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 56 | 314 | - | - | |
Mch10g1678 | 864 | Pfam | Trehalose-phosphatase | 597 | 829 | IPR003337 | GO:0005992(InterPro) | |
Mch10g1678 | 864 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 27 | 841 | IPR001830 | GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(PANTHER)|GO:0005992(InterPro)|GO:0070413(PANTHER) | |
Mch10g1678 | 864 | CDD | HAD_TPP | 595 | 831 | - | - | |
Mch10g1678 | 864 | FunFam | Trehalose-6-phosphate synthase 2 | 677 | 756 | - | - | |
Mch10g1678 | 864 | Gene3D | - | 723 | 854 | IPR023214 | - | |
Mch10g1678 | 864 | Gene3D | - | 593 | 712 | IPR023214 | - | |
Mch10g1678 | 864 | NCBIfam | HAD-IIB family hydrolase | 596 | 797 | IPR006379 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g1678 | Mch-Chr10:16832707 | Mch9g1356 | Mch-Chr9:15890577 | 0 | dispersed | |
Mch10g1678 | Mch-Chr10:16832707 | Mch4g0135 | Mch-Chr4:891787 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch10g1678 | K16055 | - | csv:101207192 | 1677.92 |