Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch10g1717 | ATGCAGAGTAAAAGAGGGAGGAAGATGTTTACATGCATAGCATGTACGAAACAGACAGACGAGGGGGGAGAGGATGGGGGAGGTGCGCGTGGGAGTGGCACGCCGAGTACAAAGGAAGCCGTCAAAAGCCTGACAACGCAGATAAAGGATATGGCGTTGAAATTCTCTGGTGCTTATAGGCAGTGCAAGCCCTGTACTGGCTCCAGTAGCTACAAGAAAGGACAGCGACCTTACCCAGATTTCGACACTGCTTCAGAAGGGGTGCCATATCCCTACATAGGAGGGGCAAGTGCGAGTTCGACACCTGCCTGGGACTTCCCCCCGGTCAATCGCCACCCACACCCAAGATCTGACTCAAGATTTAAAGGGGTTTTCAGAGGTGACCAGACCCCTGGAGCCGATTCCACCATTTCGGCGTGTGACGTGGTGCTTGAGGATGAGGATGAGCCCAAAGAGTGGATGGCACAGGTGGAGCCTGGTGTTCACATTACTTTTGTGTCCCTACCCAATGGCGGCAATGATTTAAAACGGATTCGTTTCAATCGAGAAATGTTCAACAAATGGCAAGCTCAGCGATGGTGGGGCGAGAACTATGACAGAATAACGGAGCTCTACAATGTCCAGAGATTCAACCAACAAGCTCTTCATACGCCACCAAGAACTGAGGACGGGAGGGATTCTTCTTACTCAAGAATGGGACGGGATAGTCCGATGACTTCGGCGAACAAAGATTGGACGCCGAGAAACTATAAACCCTCTGGAAGTAAAGGTTACTTTCCATCTGATCAGCATTTTGATCAGGGAAGCAGTCACCATTATGCAGGATCAAGCGCCTATCCCGCAGGCAGCGCAAAAGGTGATATGTCATCAATGGAAGCATCACGCACGACCACCTCTTCTAGAGATGAACCTTCGGTTTCCATTAGCAATGCAAGCGACATCGAGGCAGAGTGGGTCGAGGAAGATGAACCAGGGGTGTACATTACAATCAGACAGCTTGTTGATGGCACTAGAGAGCTTCGTCGCGTCAGATTCAGCCGTGAACGGTTCGGGGAGGTGAATGCGAAGCAGTGGTGGGAACAGAACAGGGAGAGAATCCAAGCTCAATACCTATAA | 1116 | 50.72 | MQSKRGRKMFTCIACTKQTDEGGEDGGGARGSGTPSTKEAVKSLTTQIKDMALKFSGAYRQCKPCTGSSSYKKGQRPYPDFDTASEGVPYPYIGGASASSTPAWDFPPVNRHPHPRSDSRFKGVFRGDQTPGADSTISACDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFNREMFNKWQAQRWWGENYDRITELYNVQRFNQQALHTPPRTEDGRDSSYSRMGRDSPMTSANKDWTPRNYKPSGSKGYFPSDQHFDQGSSHHYAGSSAYPAGSAKGDMSSMEASRTTTSSRDEPSVSISNASDIEAEWVEEDEPGVYITIRQLVDGTRELRRVRFSRERFGEVNAKQWWEQNRERIQAQYL | 371 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 17175033 | 17180197 | + | MC10g1369 | Mch10g1717 | 678810 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch10g1717 | 371 | MobiDBLite | consensus disorder prediction | 111 | 133 | - | - | |
Mch10g1717 | 371 | MobiDBLite | consensus disorder prediction | 260 | 276 | - | - | |
Mch10g1717 | 371 | Pfam | Transcription factor BRX N-terminal domain | 32 | 65 | IPR027988 | - | |
Mch10g1717 | 371 | PANTHER | PROTEIN BREVIS RADIX-LIKE 1 | 9 | 371 | IPR044532 | - | |
Mch10g1717 | 371 | MobiDBLite | consensus disorder prediction | 289 | 309 | - | - | |
Mch10g1717 | 371 | MobiDBLite | consensus disorder prediction | 18 | 40 | - | - | |
Mch10g1717 | 371 | Pfam | Transcription factor regulating root and shoot growth via Pin3 | 151 | 205 | IPR013591 | - | |
Mch10g1717 | 371 | Pfam | Transcription factor regulating root and shoot growth via Pin3 | 315 | 370 | IPR013591 | - | |
Mch10g1717 | 371 | ProSiteProfiles | BRX domain profile. | 151 | 206 | IPR013591 | - | |
Mch10g1717 | 371 | ProSiteProfiles | BRX domain profile. | 316 | 371 | IPR013591 | - | |
Mch10g1717 | 371 | MobiDBLite | consensus disorder prediction | 212 | 309 | - | - | |
Mch10g1717 | 371 | MobiDBLite | consensus disorder prediction | 232 | 249 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g1717 | Mch-Chr10:17175033 | Mch8g3237 | Mch-Chr8:34379942 | 1.20E-96 | dispersed | |
Mch10g1717 | Mch-Chr10:17175033 | Mch9g0230 | Mch-Chr9:1720610 | 2.87E-101 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch10g1717 | - | - | - | 0.0 |