Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g1743 ATGGGCAGGATGGGAGGTAAGCTCAGGTTTTACAGCGCCAATTCTAGCGACTACAAGCTTCTCGAGGAGATTGGTTATGGTGCCAGTGCTACGGTTTTTAGAGCGATCTACACTCCGTCTAATGAAGTTGTGGCCATCAAGTGTTTGGATCTTGATCGCTGCAATAGTAATCTTGATGATATACGTAGGGAGGCTCAAACAATGAGTTTGATAGATCATCCGAACCTTGTAAGGGCTTATTGTTCATTTGTTGTTGAACGAAACCTTTGGGTTGTCATGCCATTCATGGCAGAGGGTTCTTGTTTGCACCTAATAAAGACAGCATACTCAGATGGATTTGAAGAGGTTGCTATTGGTTCTATCCTGAAAGAAACTCTTAAAGCTTTGGAGTACCTTCACCGCCAGGGACACATACATCGGGATGTGAAGGCTGGAAATATACTGCTTGATAGTAATGGGGCTGTGAAGCTTGCTGATTTTGGTGTTTCAGCTTGCATGTTTGATACAGGTGATAGACAGCGCTCCAGAAATACCTTTGTGGGAACCCCATGCTGGATGGCACCGGAGGTATTGCAACCAGGAACGGGATATAATTCCAAGGCTGATATTTGGTCCTTTGGTATAACAGCATTGGAGTTGGCTCATGGTCATGCACCATTTTCTAAATATCCTCCAATGAAGGTGCTCCTTATGACAATACAAAATGCTCCTCCTGGGCTAGATTACGATAGAGATAAAAAGTTCTCTAAGTCTTTTAAAGAAATGGTTGCAATGTGCCTGGTGAAAGATCAAACCAAGAGGCCAACAGCTGAGAAACTTTTAAAGCACTCCTTTTTCAAGAATGCTAAGCCTCCAGAGCTTTCTTTGAAGAAATTATTTGCTAACTTGCCTCCTCTTTCACACCGTGTAAAGGACCTGCAGCTTAAAGATGCTGCCCAGCTAGCCTTAAAGAAAATGCCTTCAGCAGAGCAAGAAGCACTATCACAGAGTGAGTACCAGCGAGGAGTTAGTGCATGGAACTTTGATGTCGAGGATTTGAAAGCCCAAGCTTCCTTGGTGAATGATGATATGCCAGAGATGAGGGAAGAGGAGGAGAAAACAAATTCTTGTAGTGTTAAGGATGCTATTTGTCCTCAATCTAGTTTGAGGAATTTCAATTCATGTAGTGAATTATCTCGGGATGAGCATGGATTAGGGGCAAGTGGTCAGGGATTGGCACAAGTGGAGTGCTTGAGCAAAAAGGGAAACTTTATGGAAAGTGATATGCTGAAATCTGGGTTCCAAGAAAAAACCGGATGGAAGAGAAATGGAACGAGCACTGAAGCAGAAGCATCCACCTCTGGCCAAGACAATGTACAAGGCAAGACTAAAACCCAAATGCCAAAAGGTCGTCAAACTCAAAGTGGTCCACTTCTACCTGGTATTGTGCTTAGTCATTCTTTATCAGAAAGAGTGCGAGGCTCTGAGAGGTTTGATTCTGAAAGTCAACCATCTACTGAAAAGAATCGTCGAGAAGCACGGCAAGCTCCAAGCTTCAGTGGTCCACTGATGCTGCCAAACCGAGCCTCGGCAAACAGCCTATCAGCTCCCATAAAGCCTTCTGGAGGGTTTCGAGATTCAATGGATGACAAATCAAAAGCTAATCTTGTGCAAATTAAGGGACGTTTTTCAGTAACATCAGAGAACCTAGATCTCGTAAAGGATATTCCATTGAGTACGGTCTCACGCCGGTCTTCACAGAACTCGCCTCTACGAAAGTCAGCTAGCGTTGGTGATTGGATATTTGATTCCAAGCAGCCTGTCAGCCTTTCTCCCAAGGAAGCTTGCAACATCAACATGCCCACATCAGTTCTAATGCCTCATCTTCAGAATCTTTTCCATCAGACCTCAATTCAACAGGATCTTATAGTGAGCTTATTGAATAGCTTACAAACATCAGACGTGGTTGATGCTACTCAAAATGGAAAGTTGCCTCCACTGCCTCGAAGCTCGGAGAACAATGGAAGTAATTCCTTTGTTTGGCAGGCTGAATCAGCCGCTGTTGAGAGAGAGCGTTTACTGATTCGGAAGGTCTCCGAACTTCAAGCTAGAATGACGCATTTGACCTATGAATTGACTGCTGAAAAGTTGAAATACATTCAATTACAAGAGCAGTTCAACTCAACATCTGGTCATGACGAAAATGAGATCAAGAGGGAAGAGAACGTC 2208 43.8 MGRMGGKLRFYSANSSDYKLLEEIGYGASATVFRAIYTPSNEVVAIKCLDLDRCNSNLDDIRREAQTMSLIDHPNLVRAYCSFVVERNLWVVMPFMAEGSCLHLIKTAYSDGFEEVAIGSILKETLKALEYLHRQGHIHRDVKAGNILLDSNGAVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKNAKPPELSLKKLFANLPPLSHRVKDLQLKDAAQLALKKMPSAEQEALSQSEYQRGVSAWNFDVEDLKAQASLVNDDMPEMREEEEKTNSCSVKDAICPQSSLRNFNSCSELSRDEHGLGASGQGLAQVECLSKKGNFMESDMLKSGFQEKTGWKRNGTSTEAEASTSGQDNVQGKTKTQMPKGRQTQSGPLLPGIVLSHSLSERVRGSERFDSESQPSTEKNRREARQAPSFSGPLMLPNRASANSLSAPIKPSGGFRDSMDDKSKANLVQIKGRFSVTSENLDLVKDIPLSTVSRRSSQNSPLRKSASVGDWIFDSKQPVSLSPKEACNINMPTSVLMPHLQNLFHQTSIQQDLIVSLLNSLQTSDVVDATQNGKLPPLPRSSENNGSNSFVWQAESAAVERERLLIRKVSELQARMTHLTYELTAEKLKYIQLQEQFNSTSGHDENEIKREENV 736
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 17343255 17354849 - MC10g1392 Mch10g1743 678836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g1743 736 MobiDBLite consensus disorder prediction 431 466 - -
Mch10g1743 736 Gene3D Phosphorylase Kinase; domain 1 8 95 - -
Mch10g1743 736 Gene3D Transferase(Phosphotransferase) domain 1 99 330 - -
Mch10g1743 736 FunFam serine/threonine-protein kinase BLUS1-like isoform X2 99 329 - -
Mch10g1743 736 Pfam Protein kinase domain 18 279 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g1743 736 ProSiteProfiles Protein kinase domain profile. 18 279 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g1743 736 MobiDBLite consensus disorder prediction 428 519 - -
Mch10g1743 736 SMART serkin_6 18 279 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g1743 736 SUPERFAMILY Protein kinase-like (PK-like) 16 335 IPR011009 -
Mch10g1743 736 Coils Coil 343 363 - -
Mch10g1743 736 FunFam Serine/threonine-protein kinase BLUS1 7 95 - -
Mch10g1743 736 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524(InterPro)
Mch10g1743 736 CDD STKc_OSR1_SPAK 16 279 - -
Mch10g1743 736 MobiDBLite consensus disorder prediction 483 507 - -
Mch10g1743 736 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 11 715 IPR047173 GO:0043539(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1743 Mch-Chr10:17343255 Mch8g1508 Mch-Chr8:11515694 2.35E-159 dispersed
Mch10g1743 Mch-Chr10:17343255 Mch4g2219 Mch-Chr4:23817061 3.10E-169 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77032 PF00069 Pkinase 1.80E-61 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g1743 - - - 0.0