Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch10g1800 | ATGCCGATTGAGGAAGAAGATGTTGAGAGCTGTGGCAGCAGGCCCTCACCCACGCATTCCTCATCCCACGCCAACCCTAGGCATCACCGCCACAAGTTCCAGGTCTACAGCGAAGTCCTCCGTCGAATCCAGGATTCCGATTTCCGGGAGGCTAATCTCCCTGGCTTTGATCATCAGCTCTGGCTCCATTTCAATCGCCTCCCTGCCAGATACGCGTTGGATGTGAATGTTGACCGAGCAGAAGATGTACTCACACATAAGAGATTACTTCAATTGGCTGTAGACCCTGCTAATCGACCTGCATTTGAAGTTCGTTCTGTTCAGGTTTATCCTTCTTCCAACGAAAACTATATCAATTCTTCCTGTTTGGATTCTTCAATGATTGAAGATGCTCAGAGCTCTTTCAATTATTCTAATATACAGGGGAACCATCCTCCTCCAACCTTTGGTTCTTCACCTCATCTGGAAGCACTTGCACTACAAGCCAGCAAATATGGCGTTGAAGATGGAGACAGTGCCCTACATGTGACACCCTGCTTCTCACGGCCAATGCATGAGATTACATTTGCAACAAGTGACAAGCCTAAACTCCTCAGTCAGTTAACTTCCTTACTAGCTGATGTTGGACTTAACATACAAGAAGCTCATGCATTCTCCTCTGTTGATGGTTTCTCTCTGGATGTTTTTGTCATTGATGGTTGGCCTTATGAGGAAACTGAGGAGCTTAAAAGGGCATTAGAAAAAGAAATTTTAAATTTTAAGGAGCAGTGTTGGTCAGAAAAACAGTCAAGTTCTGCCTTGGGTAAGAATAACCAGAATAGAGTCGAATCTTTTCCTAGTTGTGTTGAAATACCTGCTGATGGTACTGATGTCTGGGAAATTGACACCAGACAACTAAAACTTGAGAATAAAGTTGGATCCGGGTCATATGGGGACCTGTATCGGGGCACGTATTTTAGTCAGGAAGTAGCTATTAAAGTACTGAGGCCTGAGCTTATTAATGAAGAGATGATCAAAGAATTCTCTCAAGAAGTTTATATAATGAGGAAAGTTCGGCACAAAAATGTTGTTCAATTTATTGGCGCTTGTACTAGACCTTCAAACCTGTGCATTGTGACGGAGTTTATGTCGAGAGGAAGCATATTTGACTTCCTTCATAAGCAAAGAGGTGTATTTAACCTTCCGTCTTTGCTTAAAGTAGCCATTGATATTTCAAGAGGGATGAATTATTTGCACCAAAATAATATAATCCATCGAGACCTCAAGACTGCTAATCTTCTAATGGATGAAAACATGGTTGTTAAGGTTGCTGATTTTGGAGTTGCCAGAGTCCAAACTCAATCTGGAGTGATGACAGCTGAAACTGGAACATACCGGTGGATGGCTCCTGAAGTCATTGAGCATAAACCGTATGACCATAAGGCAGACGTTTTCAGTTTTGGAATAGCCTTGTGGGAGCTTTTAACTGGAGAAATTCCTTACTCATCCATGACCCCATTACAAGCCGCTGTTGGCGTAGTACAGAAGGGACTGCGGCCTACAATACCCAAGAATGTCCATCCCATTCTTGTAGAGCTGCTTGAAAAATGCTGGCGACTGGATCCAACCGAACGACCAGACTTCTCTGAAATTATAGAAATTCTCAAGCAGATGGCTGAGCAGGTAATCGAAAATAACGGGGAAGATCGACGCAAGAAGGATAAATTATCTGGCGGATTCTTCTCAGCCTTCAGGAAGGGGCATCGCTGA | 1749 | 43.51 | MPIEEEDVESCGSRPSPTHSSSHANPRHHRHKFQVYSEVLRRIQDSDFREANLPGFDHQLWLHFNRLPARYALDVNVDRAEDVLTHKRLLQLAVDPANRPAFEVRSVQVYPSSNENYINSSCLDSSMIEDAQSSFNYSNIQGNHPPPTFGSSPHLEALALQASKYGVEDGDSALHVTPCFSRPMHEITFATSDKPKLLSQLTSLLADVGLNIQEAHAFSSVDGFSLDVFVIDGWPYEETEELKRALEKEILNFKEQCWSEKQSSSALGKNNQNRVESFPSCVEIPADGTDVWEIDTRQLKLENKVGSGSYGDLYRGTYFSQEVAIKVLRPELINEEMIKEFSQEVYIMRKVRHKNVVQFIGACTRPSNLCIVTEFMSRGSIFDFLHKQRGVFNLPSLLKVAIDISRGMNYLHQNNIIHRDLKTANLLMDENMVVKVADFGVARVQTQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIALWELLTGEIPYSSMTPLQAAVGVVQKGLRPTIPKNVHPILVELLEKCWRLDPTERPDFSEIIEILKQMAEQVIENNGEDRRKKDKLSGGFFSAFRKGHR | 582 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 17693023 | 17705003 | + | MC10g1442 | Mch10g1800 | 678893 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch10g1800 | 582 | ProSiteProfiles | Protein kinase domain profile. | 299 | 556 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch10g1800 | 582 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Mch10g1800 | 582 | CDD | STKc_MAP3K-like | 305 | 548 | - | - | |
Mch10g1800 | 582 | Gene3D | Transferase(Phosphotransferase) domain 1 | 378 | 571 | - | - | |
Mch10g1800 | 582 | Coils | Coil | 236 | 256 | - | - | |
Mch10g1800 | 582 | CDD | ACT_TyrKc | 184 | 251 | - | - | |
Mch10g1800 | 582 | ProSiteProfiles | ACT domain profile. | 186 | 261 | IPR002912 | - | |
Mch10g1800 | 582 | SMART | serkin_6 | 299 | 552 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch10g1800 | 582 | FunFam | Serine/threonine-protein kinase isoform 1 | 289 | 377 | - | - | |
Mch10g1800 | 582 | SUPERFAMILY | Protein kinase-like (PK-like) | 274 | 548 | IPR011009 | - | |
Mch10g1800 | 582 | Gene3D | Phosphorylase Kinase; domain 1 | 289 | 377 | - | - | |
Mch10g1800 | 582 | SUPERFAMILY | ACT-like | 184 | 249 | IPR045865 | - | |
Mch10g1800 | 582 | Pfam | Protein tyrosine and serine/threonine kinase | 299 | 548 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch10g1800 | 582 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 125 | 552 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Mch10g1800 | 582 | PRINTS | Tyrosine kinase catalytic domain signature | 456 | 466 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch10g1800 | 582 | PRINTS | Tyrosine kinase catalytic domain signature | 519 | 541 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch10g1800 | 582 | PRINTS | Tyrosine kinase catalytic domain signature | 410 | 428 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch10g1800 | 582 | PRINTS | Tyrosine kinase catalytic domain signature | 475 | 497 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch10g1800 | 582 | PRINTS | Tyrosine kinase catalytic domain signature | 373 | 386 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch10g1800 | 582 | FunFam | serine/threonine-protein kinase HT1 | 378 | 570 | - | - | |
Mch10g1800 | 582 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 416 | 428 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch10g1800 | 582 | ProSitePatterns | Protein kinases ATP-binding region signature. | 305 | 326 | IPR017441 | GO:0005524(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g1800 | Mch-Chr10:17693023 | Mch8g2582 | Mch-Chr8:28960626 | 1.34E-81 | dispersed | |
Mch6g1937 | Mch-Chr6:21862934 | Mch10g1800 | Mch-Chr10:17693023 | 1.26E-23 | dispersed | |
Mch4g0457 | Mch-Chr4:2917781 | Mch10g1800 | Mch-Chr10:17693023 | 1.96E-283 | transposed | |
Mch4g1871 | Mch-Chr4:21411785 | Mch10g1800 | Mch-Chr10:17693023 | 1.69E-168 | transposed | |
Mch5g0551 | Mch-Chr5:3708855 | Mch10g1800 | Mch-Chr10:17693023 | 3.92E-15 | transposed | |
Mch10g1800 | Mch-Chr10:17693023 | Mch11g0087 | Mch-Chr11:570645 | 7.32E-222 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77033 | PF07714 | PK_Tyr_Ser-Thr | 5.90E-74 | CL0016 | Mch | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch10g1800 | - | - | - | 0.0 |