Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g1800 ATGCCGATTGAGGAAGAAGATGTTGAGAGCTGTGGCAGCAGGCCCTCACCCACGCATTCCTCATCCCACGCCAACCCTAGGCATCACCGCCACAAGTTCCAGGTCTACAGCGAAGTCCTCCGTCGAATCCAGGATTCCGATTTCCGGGAGGCTAATCTCCCTGGCTTTGATCATCAGCTCTGGCTCCATTTCAATCGCCTCCCTGCCAGATACGCGTTGGATGTGAATGTTGACCGAGCAGAAGATGTACTCACACATAAGAGATTACTTCAATTGGCTGTAGACCCTGCTAATCGACCTGCATTTGAAGTTCGTTCTGTTCAGGTTTATCCTTCTTCCAACGAAAACTATATCAATTCTTCCTGTTTGGATTCTTCAATGATTGAAGATGCTCAGAGCTCTTTCAATTATTCTAATATACAGGGGAACCATCCTCCTCCAACCTTTGGTTCTTCACCTCATCTGGAAGCACTTGCACTACAAGCCAGCAAATATGGCGTTGAAGATGGAGACAGTGCCCTACATGTGACACCCTGCTTCTCACGGCCAATGCATGAGATTACATTTGCAACAAGTGACAAGCCTAAACTCCTCAGTCAGTTAACTTCCTTACTAGCTGATGTTGGACTTAACATACAAGAAGCTCATGCATTCTCCTCTGTTGATGGTTTCTCTCTGGATGTTTTTGTCATTGATGGTTGGCCTTATGAGGAAACTGAGGAGCTTAAAAGGGCATTAGAAAAAGAAATTTTAAATTTTAAGGAGCAGTGTTGGTCAGAAAAACAGTCAAGTTCTGCCTTGGGTAAGAATAACCAGAATAGAGTCGAATCTTTTCCTAGTTGTGTTGAAATACCTGCTGATGGTACTGATGTCTGGGAAATTGACACCAGACAACTAAAACTTGAGAATAAAGTTGGATCCGGGTCATATGGGGACCTGTATCGGGGCACGTATTTTAGTCAGGAAGTAGCTATTAAAGTACTGAGGCCTGAGCTTATTAATGAAGAGATGATCAAAGAATTCTCTCAAGAAGTTTATATAATGAGGAAAGTTCGGCACAAAAATGTTGTTCAATTTATTGGCGCTTGTACTAGACCTTCAAACCTGTGCATTGTGACGGAGTTTATGTCGAGAGGAAGCATATTTGACTTCCTTCATAAGCAAAGAGGTGTATTTAACCTTCCGTCTTTGCTTAAAGTAGCCATTGATATTTCAAGAGGGATGAATTATTTGCACCAAAATAATATAATCCATCGAGACCTCAAGACTGCTAATCTTCTAATGGATGAAAACATGGTTGTTAAGGTTGCTGATTTTGGAGTTGCCAGAGTCCAAACTCAATCTGGAGTGATGACAGCTGAAACTGGAACATACCGGTGGATGGCTCCTGAAGTCATTGAGCATAAACCGTATGACCATAAGGCAGACGTTTTCAGTTTTGGAATAGCCTTGTGGGAGCTTTTAACTGGAGAAATTCCTTACTCATCCATGACCCCATTACAAGCCGCTGTTGGCGTAGTACAGAAGGGACTGCGGCCTACAATACCCAAGAATGTCCATCCCATTCTTGTAGAGCTGCTTGAAAAATGCTGGCGACTGGATCCAACCGAACGACCAGACTTCTCTGAAATTATAGAAATTCTCAAGCAGATGGCTGAGCAGGTAATCGAAAATAACGGGGAAGATCGACGCAAGAAGGATAAATTATCTGGCGGATTCTTCTCAGCCTTCAGGAAGGGGCATCGCTGA 1749 43.51 MPIEEEDVESCGSRPSPTHSSSHANPRHHRHKFQVYSEVLRRIQDSDFREANLPGFDHQLWLHFNRLPARYALDVNVDRAEDVLTHKRLLQLAVDPANRPAFEVRSVQVYPSSNENYINSSCLDSSMIEDAQSSFNYSNIQGNHPPPTFGSSPHLEALALQASKYGVEDGDSALHVTPCFSRPMHEITFATSDKPKLLSQLTSLLADVGLNIQEAHAFSSVDGFSLDVFVIDGWPYEETEELKRALEKEILNFKEQCWSEKQSSSALGKNNQNRVESFPSCVEIPADGTDVWEIDTRQLKLENKVGSGSYGDLYRGTYFSQEVAIKVLRPELINEEMIKEFSQEVYIMRKVRHKNVVQFIGACTRPSNLCIVTEFMSRGSIFDFLHKQRGVFNLPSLLKVAIDISRGMNYLHQNNIIHRDLKTANLLMDENMVVKVADFGVARVQTQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIALWELLTGEIPYSSMTPLQAAVGVVQKGLRPTIPKNVHPILVELLEKCWRLDPTERPDFSEIIEILKQMAEQVIENNGEDRRKKDKLSGGFFSAFRKGHR 582
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 17693023 17705003 + MC10g1442 Mch10g1800 678893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g1800 582 ProSiteProfiles Protein kinase domain profile. 299 556 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g1800 582 MobiDBLite consensus disorder prediction 1 29 - -
Mch10g1800 582 CDD STKc_MAP3K-like 305 548 - -
Mch10g1800 582 Gene3D Transferase(Phosphotransferase) domain 1 378 571 - -
Mch10g1800 582 Coils Coil 236 256 - -
Mch10g1800 582 CDD ACT_TyrKc 184 251 - -
Mch10g1800 582 ProSiteProfiles ACT domain profile. 186 261 IPR002912 -
Mch10g1800 582 SMART serkin_6 299 552 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch10g1800 582 FunFam Serine/threonine-protein kinase isoform 1 289 377 - -
Mch10g1800 582 SUPERFAMILY Protein kinase-like (PK-like) 274 548 IPR011009 -
Mch10g1800 582 Gene3D Phosphorylase Kinase; domain 1 289 377 - -
Mch10g1800 582 SUPERFAMILY ACT-like 184 249 IPR045865 -
Mch10g1800 582 Pfam Protein tyrosine and serine/threonine kinase 299 548 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch10g1800 582 PANTHER SERINE-THREONINE PROTEIN KINASE 125 552 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Mch10g1800 582 PRINTS Tyrosine kinase catalytic domain signature 456 466 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch10g1800 582 PRINTS Tyrosine kinase catalytic domain signature 519 541 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch10g1800 582 PRINTS Tyrosine kinase catalytic domain signature 410 428 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch10g1800 582 PRINTS Tyrosine kinase catalytic domain signature 475 497 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch10g1800 582 PRINTS Tyrosine kinase catalytic domain signature 373 386 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch10g1800 582 FunFam serine/threonine-protein kinase HT1 378 570 - -
Mch10g1800 582 ProSitePatterns Serine/Threonine protein kinases active-site signature. 416 428 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch10g1800 582 ProSitePatterns Protein kinases ATP-binding region signature. 305 326 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1800 Mch-Chr10:17693023 Mch8g2582 Mch-Chr8:28960626 1.34E-81 dispersed
Mch6g1937 Mch-Chr6:21862934 Mch10g1800 Mch-Chr10:17693023 1.26E-23 dispersed
Mch4g0457 Mch-Chr4:2917781 Mch10g1800 Mch-Chr10:17693023 1.96E-283 transposed
Mch4g1871 Mch-Chr4:21411785 Mch10g1800 Mch-Chr10:17693023 1.69E-168 transposed
Mch5g0551 Mch-Chr5:3708855 Mch10g1800 Mch-Chr10:17693023 3.92E-15 transposed
Mch10g1800 Mch-Chr10:17693023 Mch11g0087 Mch-Chr11:570645 7.32E-222 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77033 PF07714 PK_Tyr_Ser-Thr 5.90E-74 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g1800 - - - 0.0