Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g1820 CACCGCCATCTTCGGTCCCTCCACTTCTCCCTCTTCCAACATGAAACGATCAATAAAACTGGCTACTTCGTTGTAGACGGGGTGGCCGGCCCTGGGGTGAGCCAAACCACAACCCCGTTCGGAACCATGTTTGTTTTTCAGGATCCATTGACTACCACAGCTGACCGAGCGTCAAAGCTGGTTGGCACGGCGGAGGGAACCGCTATAACCTCTAGCCTAGATGGGCTACGAAGCATTAGCATAGCCAAGGTCACCTTGCGTTTGAGGCGCCACTCCGGCTCTGTCTCGGTGGTTGGTGGGACTCATAACATTAAGCCATCGAATCACCCAGTGGTCGGAGGGACTGGAGACTTCTTGTTCGTACAAGGCTATGTGACGTCGTCTCCAGTGGATCTCACCGGCATCACGGTGGTTTACAAGTTGGAATTTCACCTTTATTGGCCGCCCTATGCA 453 53.86 HRHLRSLHFSLFQHETINKTGYFVVDGVAGPGVSQTTTPFGTMFVFQDPLTTTADRASKLVGTAEGTAITSSLDGLRSISIAKVTLRLRRHSGSVSVVGGTHNIKPSNHPVVGGTGDFLFVQGYVTSSPVDLTGITVVYKLEFHLYWPPYA 151
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 17846582 17847034 + MC10g1462 Mch10g1820 678913

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g1820 151 Gene3D - 2 146 IPR044859 -
Mch10g1820 151 Pfam Dirigent-like protein 8 144 IPR004265 -
Mch10g1820 151 PANTHER DIRIGENT PROTEIN 2 151 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g1820 - - - - 0.0
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g526 . . . . . . . . Cmo06g00799 Cmo16g01195 . . . . Sed07g1687 Cpe14g00948 . Bhi11g00199 Tan01g2024 Cmetu06g2197 . Hepe06g1136 Mch10g1820 . Cla10g00261 Cam10g0267 Cec10g0274 Cco10g0272 Clacu10g0268 Cmu10g1111 Cre10g0519 . . . . Lsi07g01305 . . Cme06g02576 . . Bda07g00131 . . Bpe11g00361 . . . . . Cma06g00779 Cma16g01144 Car06g00693 Car16g01082 Cpe08g00744 . . . . . . . . . . . . . . . . Csa03g00280 Chy06g02042 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0014483 0 1 0 0 0 1 1 1 1 1 1 1 1 1 0 1 1 1 0 1 0 1 0 1 1 1 1 0 0 0 19