Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch10g1834 | GATTTGGATTCTTCAGCTTTGGGTACTCATATTTCATCCACTCCGGCGGCACCCATGGATCCCCCCTCCACCTCCTCCACCATCTCTGAATCCGATGAAAATCCCTGCACATCATCTTCACCTTCTTCCGCTCCACCTCCAGTTCACTTACCTCTTTCTTGGCCTCCCGATGCCACCCTCTCCCTCCAATGGATTCACCATCTCACCGCCGCCTTCGACTGGTCTTCCAAGAATCTACCTCCATCCCAGTTTCCTTCCGTCCTTCCCGTTTCCGTTTTCGACACTCTAATCCTCACCGCTTCTAAAATCCTCCATAAGGAACCCAATTGCCTCAGAATCCTCGAAGACTCCGTCGCCAGCACTGACTCCACTGTAGTCGTTGTCGGAGACATCCACGGTCAGTTTCATGATCTCCTCTTTCTCCTGCAGGATGCTGGCTTTCCTTCTGAAAATCGATTTTTTGTCTTCAATGGGGATTACGTCGACAGAGGGGCTTGGGGGCTGGAAACATTTCTGCTCTTATTGGCTTGGAAGGTGTTCATGCCACATCGAGTATTTCTTCTTCGTGGAAACCACGAGTCCAAGTACTGCACGTCCGTTTATGGTTTTGAGAAGGAAGTGCTAACGAAGTACGGAGACAAAGGTAAGCATGTCTATCGGAAGTGTTTGGGATGTTTCGAAGGGCTGCCTCTGGCCTCCATTATTGCGGGATGTGTATATACAGCTCATGGAGGACTTTTCCGCAGCGTATCAGTTCCTTCATCTAAAAGATCAAAAGGGAAAAAAAATCGCAGAATAAGCTTAAATCCTGAGGCCAACGGGTTGTCTCTTGGTTCTTTGGAGGAACTATCCAAAGCCAGAAGATCGGTTCTTGATCCCCCATGGGAAGGCTTGAATTTAATACCTGGTGATGTGCTGTGGTCCGATCCCTCGATGAATCCTGGTCTCTCCCCAAATAGAGAGCGAGGCATAGGTCTTTTGTGGGGTCCTGATTGCACTGAAGAATTCTTGAAAAAATTCGGCCTGAAGTTAATTATCAGATCCCATGAAGGTCCTGATGCTAGAGAAAAAAGGTCCGGTCTTGCAGGGATGGATCAGGGTTACACAATAGATCATGTTGTAGATTCTGGGAAGCTGATTACTTTGTTTAGTGCTCCTGACTATCCACAATTTCAGGCTACCGAGGAGAGGTACAAAAATAAAGGTGCATATATTGTTCTTGAACCTCCAAACTTGGACGTTCCAATCATCCATAGTTTTGAAGCCATTACTCCAAGACCGAAGGTCAATGCATATTATGACTATGAAGACGTAATTGATTCTGATGAAGAACTAGATTTGACAACAATGGCAACTGATCCATGA | 1365 | 46.67 | DLDSSALGTHISSTPAAPMDPPSTSSTISESDENPCTSSSPSSAPPPVHLPLSWPPDATLSLQWIHHLTAAFDWSSKNLPPSQFPSVLPVSVFDTLILTASKILHKEPNCLRILEDSVASTDSTVVVVGDIHGQFHDLLFLLQDAGFPSENRFFVFNGDYVDRGAWGLETFLLLLAWKVFMPHRVFLLRGNHESKYCTSVYGFEKEVLTKYGDKGKHVYRKCLGCFEGLPLASIIAGCVYTAHGGLFRSVSVPSSKRSKGKKNRRISLNPEANGLSLGSLEELSKARRSVLDPPWEGLNLIPGDVLWSDPSMNPGLSPNRERGIGLLWGPDCTEEFLKKFGLKLIIRSHEGPDAREKRSGLAGMDQGYTIDHVVDSGKLITLFSAPDYPQFQATEERYKNKGAYIVLEPPNLDVPIIHSFEAITPRPKVNAYYDYEDVIDSDEELDLTTMATDP | 454 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 17955926 | 17978907 | + | MC10g1473 | Mch10g1834 | 678927 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch10g1834 | 454 | PRINTS | Serine/threonine phosphatase family signature | 224 | 250 | IPR006186 | GO:0016787(InterPro) | |
Mch10g1834 | 454 | PRINTS | Serine/threonine phosphatase family signature | 187 | 211 | IPR006186 | GO:0016787(InterPro) | |
Mch10g1834 | 454 | PRINTS | Serine/threonine phosphatase family signature | 378 | 394 | IPR006186 | GO:0016787(InterPro) | |
Mch10g1834 | 454 | PRINTS | Serine/threonine phosphatase family signature | 154 | 181 | IPR006186 | GO:0016787(InterPro) | |
Mch10g1834 | 454 | PRINTS | Serine/threonine phosphatase family signature | 124 | 151 | IPR006186 | GO:0016787(InterPro) | |
Mch10g1834 | 454 | PRINTS | Serine/threonine phosphatase family signature | 284 | 311 | IPR006186 | GO:0016787(InterPro) | |
Mch10g1834 | 454 | PANTHER | SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED | 26 | 446 | IPR051134 | - | |
Mch10g1834 | 454 | SMART | pp2a_7 | 88 | 427 | IPR006186 | GO:0016787(InterPro) | |
Mch10g1834 | 454 | ProSitePatterns | Serine/threonine specific protein phosphatases signature. | 188 | 193 | IPR006186 | GO:0016787(InterPro) | |
Mch10g1834 | 454 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - | |
Mch10g1834 | 454 | SUPERFAMILY | Metallo-dependent phosphatases | 86 | 427 | IPR029052 | - | |
Mch10g1834 | 454 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Mch10g1834 | 454 | Pfam | Calcineurin-like phosphoesterase | 124 | 350 | IPR004843 | GO:0016787(InterPro) | |
Mch10g1834 | 454 | CDD | MPP_PP7 | 54 | 434 | IPR041754 | - | |
Mch10g1834 | 454 | FunFam | Serine/threonine-protein phosphatase | 72 | 448 | - | - | |
Mch10g1834 | 454 | Gene3D | - | 82 | 443 | IPR029052 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g1834 | Mch-Chr10:17955926 | Mch4g2127 | Mch-Chr4:23315705 | 9.62E-126 | dispersed | |
Mch10g1834 | Mch-Chr10:17955926 | Mch4g0073 | Mch-Chr4:498857 | 4.08E-51 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch10g1834 | K04460 | - | csv:116402529 | 819.69 |