Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g1834 GATTTGGATTCTTCAGCTTTGGGTACTCATATTTCATCCACTCCGGCGGCACCCATGGATCCCCCCTCCACCTCCTCCACCATCTCTGAATCCGATGAAAATCCCTGCACATCATCTTCACCTTCTTCCGCTCCACCTCCAGTTCACTTACCTCTTTCTTGGCCTCCCGATGCCACCCTCTCCCTCCAATGGATTCACCATCTCACCGCCGCCTTCGACTGGTCTTCCAAGAATCTACCTCCATCCCAGTTTCCTTCCGTCCTTCCCGTTTCCGTTTTCGACACTCTAATCCTCACCGCTTCTAAAATCCTCCATAAGGAACCCAATTGCCTCAGAATCCTCGAAGACTCCGTCGCCAGCACTGACTCCACTGTAGTCGTTGTCGGAGACATCCACGGTCAGTTTCATGATCTCCTCTTTCTCCTGCAGGATGCTGGCTTTCCTTCTGAAAATCGATTTTTTGTCTTCAATGGGGATTACGTCGACAGAGGGGCTTGGGGGCTGGAAACATTTCTGCTCTTATTGGCTTGGAAGGTGTTCATGCCACATCGAGTATTTCTTCTTCGTGGAAACCACGAGTCCAAGTACTGCACGTCCGTTTATGGTTTTGAGAAGGAAGTGCTAACGAAGTACGGAGACAAAGGTAAGCATGTCTATCGGAAGTGTTTGGGATGTTTCGAAGGGCTGCCTCTGGCCTCCATTATTGCGGGATGTGTATATACAGCTCATGGAGGACTTTTCCGCAGCGTATCAGTTCCTTCATCTAAAAGATCAAAAGGGAAAAAAAATCGCAGAATAAGCTTAAATCCTGAGGCCAACGGGTTGTCTCTTGGTTCTTTGGAGGAACTATCCAAAGCCAGAAGATCGGTTCTTGATCCCCCATGGGAAGGCTTGAATTTAATACCTGGTGATGTGCTGTGGTCCGATCCCTCGATGAATCCTGGTCTCTCCCCAAATAGAGAGCGAGGCATAGGTCTTTTGTGGGGTCCTGATTGCACTGAAGAATTCTTGAAAAAATTCGGCCTGAAGTTAATTATCAGATCCCATGAAGGTCCTGATGCTAGAGAAAAAAGGTCCGGTCTTGCAGGGATGGATCAGGGTTACACAATAGATCATGTTGTAGATTCTGGGAAGCTGATTACTTTGTTTAGTGCTCCTGACTATCCACAATTTCAGGCTACCGAGGAGAGGTACAAAAATAAAGGTGCATATATTGTTCTTGAACCTCCAAACTTGGACGTTCCAATCATCCATAGTTTTGAAGCCATTACTCCAAGACCGAAGGTCAATGCATATTATGACTATGAAGACGTAATTGATTCTGATGAAGAACTAGATTTGACAACAATGGCAACTGATCCATGA 1365 46.67 DLDSSALGTHISSTPAAPMDPPSTSSTISESDENPCTSSSPSSAPPPVHLPLSWPPDATLSLQWIHHLTAAFDWSSKNLPPSQFPSVLPVSVFDTLILTASKILHKEPNCLRILEDSVASTDSTVVVVGDIHGQFHDLLFLLQDAGFPSENRFFVFNGDYVDRGAWGLETFLLLLAWKVFMPHRVFLLRGNHESKYCTSVYGFEKEVLTKYGDKGKHVYRKCLGCFEGLPLASIIAGCVYTAHGGLFRSVSVPSSKRSKGKKNRRISLNPEANGLSLGSLEELSKARRSVLDPPWEGLNLIPGDVLWSDPSMNPGLSPNRERGIGLLWGPDCTEEFLKKFGLKLIIRSHEGPDAREKRSGLAGMDQGYTIDHVVDSGKLITLFSAPDYPQFQATEERYKNKGAYIVLEPPNLDVPIIHSFEAITPRPKVNAYYDYEDVIDSDEELDLTTMATDP 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 17955926 17978907 + MC10g1473 Mch10g1834 678927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g1834 454 PRINTS Serine/threonine phosphatase family signature 224 250 IPR006186 GO:0016787(InterPro)
Mch10g1834 454 PRINTS Serine/threonine phosphatase family signature 187 211 IPR006186 GO:0016787(InterPro)
Mch10g1834 454 PRINTS Serine/threonine phosphatase family signature 378 394 IPR006186 GO:0016787(InterPro)
Mch10g1834 454 PRINTS Serine/threonine phosphatase family signature 154 181 IPR006186 GO:0016787(InterPro)
Mch10g1834 454 PRINTS Serine/threonine phosphatase family signature 124 151 IPR006186 GO:0016787(InterPro)
Mch10g1834 454 PRINTS Serine/threonine phosphatase family signature 284 311 IPR006186 GO:0016787(InterPro)
Mch10g1834 454 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 26 446 IPR051134 -
Mch10g1834 454 SMART pp2a_7 88 427 IPR006186 GO:0016787(InterPro)
Mch10g1834 454 ProSitePatterns Serine/threonine specific protein phosphatases signature. 188 193 IPR006186 GO:0016787(InterPro)
Mch10g1834 454 MobiDBLite consensus disorder prediction 1 50 - -
Mch10g1834 454 SUPERFAMILY Metallo-dependent phosphatases 86 427 IPR029052 -
Mch10g1834 454 MobiDBLite consensus disorder prediction 1 39 - -
Mch10g1834 454 Pfam Calcineurin-like phosphoesterase 124 350 IPR004843 GO:0016787(InterPro)
Mch10g1834 454 CDD MPP_PP7 54 434 IPR041754 -
Mch10g1834 454 FunFam Serine/threonine-protein phosphatase 72 448 - -
Mch10g1834 454 Gene3D - 82 443 IPR029052 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1834 Mch-Chr10:17955926 Mch4g2127 Mch-Chr4:23315705 9.62E-126 dispersed
Mch10g1834 Mch-Chr10:17955926 Mch4g0073 Mch-Chr4:498857 4.08E-51 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g1834 K04460 - csv:116402529 819.69