Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g1837 ATGACCTTTGACATGGCTCAGAGTGCTAGGACAATGGGTTCCTCCTTTAACTCCAGCAGTGGAAATGATGATACTTTTCTTAACAGTTTTGCTGCTGCTTCAAATGGGGATGATTATGATAGCGATGGCTCCAATTTTGCACCTCCTACTCCTACCACCATATCCATGGCAATTCCGGCTGAACTTGCTAGTGTCATACCTTTGGTTGACAGATTTCAGGTGGAAGGATTCTTGAGGATGATGCATAAACAGATCCATTCTTCTGGAAAACGTGGATTCTTTTCCAAAAGATCTGTAGGTCCTCAAGTTCGGGAAAAATTCACATTTGAGGATATGTTGTGTTTCCAAAAGGATCCTATACCAACTTCATTACTTAAAATTAACTCTGACCTGGTGAGCCGAGCCATTAAACTATTCCAGATAATCTTGAAGTACATTGGTGTTGACTATTCTGATAGAATTAATGCAATAAGCTTAGATGAACGAATTGAGCTTGTTGGAAAACTATACAAGCACACTTTGAAACGTTCAGAGCTTCGAGATGAACTTTTTATCCAAATCTCAAAGCAGACTAGAAATTCTCCTGATAGGCAATATTTGATCAAAGCATGGGAGTTGATGTATCTATGTGCATCTGCCATGCCTCCTAGCAAGGATATTGGTGGGTATCTTTCGGAATATGTTCATAATGTTGCACAAGGCACAAGTACTGATCCAGAGGTTCAAGTTCTTGCATTAAATACACTAAATGCTTTAAAGCGTTGCATGAAGGCTGGTCCCAGACATATAATACCTGGTCGTGAGGAAATTGAAGCTCTTTTGACAGGGCGAAAGCTTACAACGATAGTGTTTTTCTTGGATGAAACTTTCGAAGAAATCACATATGACATGACGACAACAGTGGCTGATGCTGTTGAGGAACTTTCGGGAATTATAAAGCTGTTGGCACACTCTAGCTTCAGTCTTTTTGAATGCCGTAAGATTGTCAGTGGGGCTAAAGCACTTGATCTAGGAAATGAGGAGTATGTTGGGCTTGATGATAACAAATATATTGGAGATCTTTTAGCAGAATTCAAGACGGCAAAAGATCGAAGTAAAGGAGAAATTCTGCACTTCAAATTGACATTTAAAAAAAAGCTGTTTCGAGAGTCTGATGAAGCTGTAGCAGACCCAATGTTTGTACAGCTATCATATGTCCAACTGCAGCATGACTATTTGTTGGGAAATTATCCTGTTGGAAGGGATGATGCTGCACAGTTGTCAGCATTACAAATCCTTGTTGAAATTGGGTTTATTACGAGTCCGGAATCTTGCAGTGATTGGAATTCGCTTCTGGAAAGATTTGTACCCAGACAAATTGCCATAACAAGACCAAAGCGAGAGTGGGAGTTGGATATTCTCTCTCGTTTTCGTTCAATGGAGCATCTGACAAAAGATGATGCGAGACAACAATTTCTCCGGATATTGAGAACACTTCCTTATGGGAATTCAGTTTTCTTTGGTGTCCGCAAGATCGATGATCCCATTGGACTTCTACCTGGACGAATAATTTTGGGTATCAACAAAAGAGGGGTTCATTTCTTCCGTCCAGTTCCAAAGGAGTATTTACATTCTGCTGAATTAAGAGATATAATGCAGTTCGGTAGCAGTAACACTGCTGTCTTTTTTAAGATGAGAGTAGCTGGTGTCCTACACATTTTCCAGTTTGAGACCAAGCAGGGAGAAGAAATTTGCATTGCTCTGCAAACGCACATAAACGATGTCATGTTGCGTCGCTACTCTAAAGCTAGATCTGCCGCGGTTGGCTCAATTCTTGGAGATTCTTCCAGCACTTTTAAGACTCAAAGTGTGGAAGTATATGAAAAACGAGTACAAGATTTGAGTAAAGACATTGAAGAATCTCAGAGAAATGCTGAACAGTTGCGGAAGGAATTGAATGAAAAGAATAAGCAAGAAGTGATAATGCAAGAAGAATTGGAGACCTTAAAAGAATCTTTGAGATTTGAAAAGCAAAACTTAGTTGAGGCAACACGTTGTCTTGAGATGCTCAGATCGCAGTATGATGAAAAAGACAAGGAACATCAGGACCTGTTAATGGAAAAGAGGGGTATGGAAGCAAGAATAACCAAGTTGAGCACCAAACTGTTGGAAAGTAATGTGAAAAAAGATACGGTTGGAATTGATGAACAGCTCTTACAAAAGCTTCAAGATGAGTTGAGGCTCCGGAATGACGAGCTGCAAGCCACTGTCGAAATTAGAAAGAAACTGGTAAACGAAAAGCTGTTGCTGGAACAAAGAGTTTTTGGACTTGAAAAGAAGACTAGTGATGAGATGGATCATCTCCAGAAAAGCTTTGAACTCGAACGCAAAGTCTTGAAACTGAGAGTGGCAGAACTTGAAAAAAAACTTGAAGGACTGACTCAAGAGCTAGCTGTCATGGAGTCAACTCTGGCGATCAGGAACTCTGATTTGGCGACACTGCAAAATAATTTGAAGGAACTAGAGGAACTACGAGAGATGAAAGAGGACATTGACCGAAAGAATGAGCAAACAGCTAACATTTTGAAGATGCAAGGGGCACAGCTAGCTGAAATGGAAGCGCTTTATAAGGAAGAACAAGTTTTAAGGAAACGCTATTTCAACACGATAGAAGATATGAAAGGAAAGATTAGAGTTTACTGTCGACTAAGACCTCTTAATGAAAAAGAAATTATTGAAAAAGAAAGAAACATGCTTACAAGTCTAGACGAGTTCACAGTTGAACATCCATGGAAAGATGATAAGCCAAAGCAGCATATGTATGATCGTGTATTTGATGGCACTGCCAACCAAGAAGATGTCTTTGAAGATACACGGGCAATCCAGTCTGCTGTAGATGGTTACAACGTATGCATATTTGCTTATGGTCAAACTGGTTCTGGGAAGACATTTACAATATATGGATCTGAGGACCATCCTGGATTGACACCACGGGCCATTGGAGAACTTTTTAGGATTTTGAAGCGGGATAGTAACAAGTTCTCATTTTCATTAAAGGCATACATGGTAGAATTATATCAAGATACATTGGTAGATCTTCTTTTGCCGAAGAATGGAAAACGGTTGAAACTAGATATTAAAAAGGATCCAAAGGGCATGGTATCCATTGAAAATGTCACAATAGCCTCTATTTCAACATTTGAAGAATTGAGAAATATTATTTATAGAGGATCAGAGCAACGACATACTTCAGAGACTCAGATGAATGAAGAAAGTTCAAGATCACATTTGATACTTTCAATTATTATTGAAAGTACCAACCTTCAAACACAATCTGTCTCTAAAGGAAAGCTTAGTTTTGTTGATCTTGCGGGTTCAGAGAGAGTAAAGAAGTCAGGTTCTTCTGGTAGCCAACTTAAGGAAGCTCAAAGCATAAATAAATCACTTTCAGCACTTGGAGATGTTATCAGTGCTTTATCTTCGGGTGGCCAACACATACCTTACAGAAATCATAAGCTAACAATGTTGATGAGTGATTCACTTGGTGGTAATGCCAAAACGCTTATGTTTGTTAACGTCTCTCCAGCTGAATCCAACTTGGACGAGACATACAATTCACTCATGTATGCATCAAGAGTTCGATCGATTGTCAATGATCCAAGCAAAAATGTATCATCTAAAGAGGTTGCTCGATTGAAGAAATTAGTTGCTTATTGGAAAGAGCAAGCAGGTAGGAGGGGAGAGGATGAGGACATGGAAGAAATTCAAGACGAGCGGCATACTAAAGAAAAAGCAGATGTTCGACATTCCATGTAG 3795 39.47 MTFDMAQSARTMGSSFNSSSGNDDTFLNSFAAASNGDDYDSDGSNFAPPTPTTISMAIPAELASVIPLVDRFQVEGFLRMMHKQIHSSGKRGFFSKRSVGPQVREKFTFEDMLCFQKDPIPTSLLKINSDLVSRAIKLFQIILKYIGVDYSDRINAISLDERIELVGKLYKHTLKRSELRDELFIQISKQTRNSPDRQYLIKAWELMYLCASAMPPSKDIGGYLSEYVHNVAQGTSTDPEVQVLALNTLNALKRCMKAGPRHIIPGREEIEALLTGRKLTTIVFFLDETFEEITYDMTTTVADAVEELSGIIKLLAHSSFSLFECRKIVSGAKALDLGNEEYVGLDDNKYIGDLLAEFKTAKDRSKGEILHFKLTFKKKLFRESDEAVADPMFVQLSYVQLQHDYLLGNYPVGRDDAAQLSALQILVEIGFITSPESCSDWNSLLERFVPRQIAITRPKREWELDILSRFRSMEHLTKDDARQQFLRILRTLPYGNSVFFGVRKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICIALQTHINDVMLRRYSKARSAAVGSILGDSSSTFKTQSVEVYEKRVQDLSKDIEESQRNAEQLRKELNEKNKQEVIMQEELETLKESLRFEKQNLVEATRCLEMLRSQYDEKDKEHQDLLMEKRGMEARITKLSTKLLESNVKKDTVGIDEQLLQKLQDELRLRNDELQATVEIRKKLVNEKLLLEQRVFGLEKKTSDEMDHLQKSFELERKVLKLRVAELEKKLEGLTQELAVMESTLAIRNSDLATLQNNLKELEELREMKEDIDRKNEQTANILKMQGAQLAEMEALYKEEQVLRKRYFNTIEDMKGKIRVYCRLRPLNEKEIIEKERNMLTSLDEFTVEHPWKDDKPKQHMYDRVFDGTANQEDVFEDTRAIQSAVDGYNVCIFAYGQTGSGKTFTIYGSEDHPGLTPRAIGELFRILKRDSNKFSFSLKAYMVELYQDTLVDLLLPKNGKRLKLDIKKDPKGMVSIENVTIASISTFEELRNIIYRGSEQRHTSETQMNEESSRSHLILSIIIESTNLQTQSVSKGKLSFVDLAGSERVKKSGSSGSQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLDETYNSLMYASRVRSIVNDPSKNVSSKEVARLKKLVAYWKEQAGRRGEDEDMEEIQDERHTKEKADVRHSM 1264
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 17999991 18021963 - MC10g1476 Mch10g1837 678930
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch10g1837 1264 Gene3D MyTH4 domain 94 276 IPR038185 -
Mch10g1837 1264 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 94 276 - -
Mch10g1837 1264 CDD FERM_B-lobe 394 492 IPR019748 -
Mch10g1837 1264 Pfam MyTH4 domain 168 272 IPR000857 GO:0005856(InterPro)
Mch10g1837 1264 SMART kinesin_4 887 1217 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Mch10g1837 1264 MobiDBLite consensus disorder prediction 1235 1264 - -
Mch10g1837 1264 Pfam FERM central domain 384 500 IPR019748 -
Mch10g1837 1264 ProSiteProfiles Kinesin motor domain profile. 889 1209 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Mch10g1837 1264 SUPERFAMILY Prismane protein-like 832 893 IPR011254 GO:0003824(InterPro)|GO:0016491(InterPro)
Mch10g1837 1264 Gene3D - 1212 1260 - -
Mch10g1837 1264 PRINTS Kinesin heavy chain signature 960 981 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Mch10g1837 1264 PRINTS Kinesin heavy chain signature 1079 1096 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Mch10g1837 1264 PRINTS Kinesin heavy chain signature 1159 1180 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Mch10g1837 1264 PRINTS Kinesin heavy chain signature 1110 1128 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Mch10g1837 1264 ProSiteProfiles FERM domain profile. 279 593 IPR000299 GO:0005856(InterPro)
Mch10g1837 1264 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 278 381 - -
Mch10g1837 1264 PANTHER KINESIN-LIKE PROTEIN KLP-3 677 1250 IPR027640 GO:0003777(InterPro)|GO:0007018(InterPro)
Mch10g1837 1264 MobiDBLite consensus disorder prediction 1 20 - -
Mch10g1837 1264 SUPERFAMILY PH domain-like 499 587 - -
Mch10g1837 1264 Coils Coil 680 700 - -
Mch10g1837 1264 SUPERFAMILY Second domain of FERM 377 494 IPR035963 -
Mch10g1837 1264 Gene3D - 497 604 IPR011993 -
Mch10g1837 1264 SMART MyTH4_1 115 274 IPR000857 GO:0005856(InterPro)
Mch10g1837 1264 CDD FERM_C_KCBP 496 604 - -
Mch10g1837 1264 Coils Coil 782 854 - -
Mch10g1837 1264 Pfam Kinesin motor domain 895 1209 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Mch10g1837 1264 Gene3D - 391 492 IPR014352 -
Mch10g1837 1264 Coils Coil 617 665 - -
Mch10g1837 1264 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 497 605 - -
Mch10g1837 1264 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 889 1237 IPR027417 -
Mch10g1837 1264 Pfam PTB domain (IRS-1 type) 510 586 IPR002404 -
Mch10g1837 1264 Gene3D Kinesin motor domain 876 1211 IPR036961 -
Mch10g1837 1264 CDD KISc_C_terminal 887 1211 - -
Mch10g1837 1264 Gene3D - 278 382 - -
Mch10g1837 1264 SMART B41_5 275 499 IPR019749 -
Mch10g1837 1264 FunFam Kinesin-like calmodulin-binding protein 833 1211 - -
Mch10g1837 1264 FunFam Kinesin-like calmodulin binding protein 382 493 - -
Mch10g1837 1264 ProSitePatterns Kinesin motor domain signature. 1109 1120 IPR019821 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)
Mch10g1837 1264 ProSiteProfiles MyTH4 domain profile. 115 274 IPR000857 GO:0005856(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1837 Mch-Chr10:17999991 Mch8g2854 Mch-Chr8:31422765 1.21E-72 dispersed
Mch10g1837 Mch-Chr10:17999991 Mch11g1149 Mch-Chr11:8073718 1.08E-68 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g1837 K27887 - csv:101206704 2228.75