Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch10g1837 | ATGACCTTTGACATGGCTCAGAGTGCTAGGACAATGGGTTCCTCCTTTAACTCCAGCAGTGGAAATGATGATACTTTTCTTAACAGTTTTGCTGCTGCTTCAAATGGGGATGATTATGATAGCGATGGCTCCAATTTTGCACCTCCTACTCCTACCACCATATCCATGGCAATTCCGGCTGAACTTGCTAGTGTCATACCTTTGGTTGACAGATTTCAGGTGGAAGGATTCTTGAGGATGATGCATAAACAGATCCATTCTTCTGGAAAACGTGGATTCTTTTCCAAAAGATCTGTAGGTCCTCAAGTTCGGGAAAAATTCACATTTGAGGATATGTTGTGTTTCCAAAAGGATCCTATACCAACTTCATTACTTAAAATTAACTCTGACCTGGTGAGCCGAGCCATTAAACTATTCCAGATAATCTTGAAGTACATTGGTGTTGACTATTCTGATAGAATTAATGCAATAAGCTTAGATGAACGAATTGAGCTTGTTGGAAAACTATACAAGCACACTTTGAAACGTTCAGAGCTTCGAGATGAACTTTTTATCCAAATCTCAAAGCAGACTAGAAATTCTCCTGATAGGCAATATTTGATCAAAGCATGGGAGTTGATGTATCTATGTGCATCTGCCATGCCTCCTAGCAAGGATATTGGTGGGTATCTTTCGGAATATGTTCATAATGTTGCACAAGGCACAAGTACTGATCCAGAGGTTCAAGTTCTTGCATTAAATACACTAAATGCTTTAAAGCGTTGCATGAAGGCTGGTCCCAGACATATAATACCTGGTCGTGAGGAAATTGAAGCTCTTTTGACAGGGCGAAAGCTTACAACGATAGTGTTTTTCTTGGATGAAACTTTCGAAGAAATCACATATGACATGACGACAACAGTGGCTGATGCTGTTGAGGAACTTTCGGGAATTATAAAGCTGTTGGCACACTCTAGCTTCAGTCTTTTTGAATGCCGTAAGATTGTCAGTGGGGCTAAAGCACTTGATCTAGGAAATGAGGAGTATGTTGGGCTTGATGATAACAAATATATTGGAGATCTTTTAGCAGAATTCAAGACGGCAAAAGATCGAAGTAAAGGAGAAATTCTGCACTTCAAATTGACATTTAAAAAAAAGCTGTTTCGAGAGTCTGATGAAGCTGTAGCAGACCCAATGTTTGTACAGCTATCATATGTCCAACTGCAGCATGACTATTTGTTGGGAAATTATCCTGTTGGAAGGGATGATGCTGCACAGTTGTCAGCATTACAAATCCTTGTTGAAATTGGGTTTATTACGAGTCCGGAATCTTGCAGTGATTGGAATTCGCTTCTGGAAAGATTTGTACCCAGACAAATTGCCATAACAAGACCAAAGCGAGAGTGGGAGTTGGATATTCTCTCTCGTTTTCGTTCAATGGAGCATCTGACAAAAGATGATGCGAGACAACAATTTCTCCGGATATTGAGAACACTTCCTTATGGGAATTCAGTTTTCTTTGGTGTCCGCAAGATCGATGATCCCATTGGACTTCTACCTGGACGAATAATTTTGGGTATCAACAAAAGAGGGGTTCATTTCTTCCGTCCAGTTCCAAAGGAGTATTTACATTCTGCTGAATTAAGAGATATAATGCAGTTCGGTAGCAGTAACACTGCTGTCTTTTTTAAGATGAGAGTAGCTGGTGTCCTACACATTTTCCAGTTTGAGACCAAGCAGGGAGAAGAAATTTGCATTGCTCTGCAAACGCACATAAACGATGTCATGTTGCGTCGCTACTCTAAAGCTAGATCTGCCGCGGTTGGCTCAATTCTTGGAGATTCTTCCAGCACTTTTAAGACTCAAAGTGTGGAAGTATATGAAAAACGAGTACAAGATTTGAGTAAAGACATTGAAGAATCTCAGAGAAATGCTGAACAGTTGCGGAAGGAATTGAATGAAAAGAATAAGCAAGAAGTGATAATGCAAGAAGAATTGGAGACCTTAAAAGAATCTTTGAGATTTGAAAAGCAAAACTTAGTTGAGGCAACACGTTGTCTTGAGATGCTCAGATCGCAGTATGATGAAAAAGACAAGGAACATCAGGACCTGTTAATGGAAAAGAGGGGTATGGAAGCAAGAATAACCAAGTTGAGCACCAAACTGTTGGAAAGTAATGTGAAAAAAGATACGGTTGGAATTGATGAACAGCTCTTACAAAAGCTTCAAGATGAGTTGAGGCTCCGGAATGACGAGCTGCAAGCCACTGTCGAAATTAGAAAGAAACTGGTAAACGAAAAGCTGTTGCTGGAACAAAGAGTTTTTGGACTTGAAAAGAAGACTAGTGATGAGATGGATCATCTCCAGAAAAGCTTTGAACTCGAACGCAAAGTCTTGAAACTGAGAGTGGCAGAACTTGAAAAAAAACTTGAAGGACTGACTCAAGAGCTAGCTGTCATGGAGTCAACTCTGGCGATCAGGAACTCTGATTTGGCGACACTGCAAAATAATTTGAAGGAACTAGAGGAACTACGAGAGATGAAAGAGGACATTGACCGAAAGAATGAGCAAACAGCTAACATTTTGAAGATGCAAGGGGCACAGCTAGCTGAAATGGAAGCGCTTTATAAGGAAGAACAAGTTTTAAGGAAACGCTATTTCAACACGATAGAAGATATGAAAGGAAAGATTAGAGTTTACTGTCGACTAAGACCTCTTAATGAAAAAGAAATTATTGAAAAAGAAAGAAACATGCTTACAAGTCTAGACGAGTTCACAGTTGAACATCCATGGAAAGATGATAAGCCAAAGCAGCATATGTATGATCGTGTATTTGATGGCACTGCCAACCAAGAAGATGTCTTTGAAGATACACGGGCAATCCAGTCTGCTGTAGATGGTTACAACGTATGCATATTTGCTTATGGTCAAACTGGTTCTGGGAAGACATTTACAATATATGGATCTGAGGACCATCCTGGATTGACACCACGGGCCATTGGAGAACTTTTTAGGATTTTGAAGCGGGATAGTAACAAGTTCTCATTTTCATTAAAGGCATACATGGTAGAATTATATCAAGATACATTGGTAGATCTTCTTTTGCCGAAGAATGGAAAACGGTTGAAACTAGATATTAAAAAGGATCCAAAGGGCATGGTATCCATTGAAAATGTCACAATAGCCTCTATTTCAACATTTGAAGAATTGAGAAATATTATTTATAGAGGATCAGAGCAACGACATACTTCAGAGACTCAGATGAATGAAGAAAGTTCAAGATCACATTTGATACTTTCAATTATTATTGAAAGTACCAACCTTCAAACACAATCTGTCTCTAAAGGAAAGCTTAGTTTTGTTGATCTTGCGGGTTCAGAGAGAGTAAAGAAGTCAGGTTCTTCTGGTAGCCAACTTAAGGAAGCTCAAAGCATAAATAAATCACTTTCAGCACTTGGAGATGTTATCAGTGCTTTATCTTCGGGTGGCCAACACATACCTTACAGAAATCATAAGCTAACAATGTTGATGAGTGATTCACTTGGTGGTAATGCCAAAACGCTTATGTTTGTTAACGTCTCTCCAGCTGAATCCAACTTGGACGAGACATACAATTCACTCATGTATGCATCAAGAGTTCGATCGATTGTCAATGATCCAAGCAAAAATGTATCATCTAAAGAGGTTGCTCGATTGAAGAAATTAGTTGCTTATTGGAAAGAGCAAGCAGGTAGGAGGGGAGAGGATGAGGACATGGAAGAAATTCAAGACGAGCGGCATACTAAAGAAAAAGCAGATGTTCGACATTCCATGTAG | 3795 | 39.47 | MTFDMAQSARTMGSSFNSSSGNDDTFLNSFAAASNGDDYDSDGSNFAPPTPTTISMAIPAELASVIPLVDRFQVEGFLRMMHKQIHSSGKRGFFSKRSVGPQVREKFTFEDMLCFQKDPIPTSLLKINSDLVSRAIKLFQIILKYIGVDYSDRINAISLDERIELVGKLYKHTLKRSELRDELFIQISKQTRNSPDRQYLIKAWELMYLCASAMPPSKDIGGYLSEYVHNVAQGTSTDPEVQVLALNTLNALKRCMKAGPRHIIPGREEIEALLTGRKLTTIVFFLDETFEEITYDMTTTVADAVEELSGIIKLLAHSSFSLFECRKIVSGAKALDLGNEEYVGLDDNKYIGDLLAEFKTAKDRSKGEILHFKLTFKKKLFRESDEAVADPMFVQLSYVQLQHDYLLGNYPVGRDDAAQLSALQILVEIGFITSPESCSDWNSLLERFVPRQIAITRPKREWELDILSRFRSMEHLTKDDARQQFLRILRTLPYGNSVFFGVRKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICIALQTHINDVMLRRYSKARSAAVGSILGDSSSTFKTQSVEVYEKRVQDLSKDIEESQRNAEQLRKELNEKNKQEVIMQEELETLKESLRFEKQNLVEATRCLEMLRSQYDEKDKEHQDLLMEKRGMEARITKLSTKLLESNVKKDTVGIDEQLLQKLQDELRLRNDELQATVEIRKKLVNEKLLLEQRVFGLEKKTSDEMDHLQKSFELERKVLKLRVAELEKKLEGLTQELAVMESTLAIRNSDLATLQNNLKELEELREMKEDIDRKNEQTANILKMQGAQLAEMEALYKEEQVLRKRYFNTIEDMKGKIRVYCRLRPLNEKEIIEKERNMLTSLDEFTVEHPWKDDKPKQHMYDRVFDGTANQEDVFEDTRAIQSAVDGYNVCIFAYGQTGSGKTFTIYGSEDHPGLTPRAIGELFRILKRDSNKFSFSLKAYMVELYQDTLVDLLLPKNGKRLKLDIKKDPKGMVSIENVTIASISTFEELRNIIYRGSEQRHTSETQMNEESSRSHLILSIIIESTNLQTQSVSKGKLSFVDLAGSERVKKSGSSGSQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLDETYNSLMYASRVRSIVNDPSKNVSSKEVARLKKLVAYWKEQAGRRGEDEDMEEIQDERHTKEKADVRHSM | 1264 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 17999991 | 18021963 | - | MC10g1476 | Mch10g1837 | 678930 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch10g1837 | 1264 | Gene3D | MyTH4 domain | 94 | 276 | IPR038185 | - | |
| Mch10g1837 | 1264 | FunFam | Kinesin-like calmodulin-binding protein (ZWICHEL) | 94 | 276 | - | - | |
| Mch10g1837 | 1264 | CDD | FERM_B-lobe | 394 | 492 | IPR019748 | - | |
| Mch10g1837 | 1264 | Pfam | MyTH4 domain | 168 | 272 | IPR000857 | GO:0005856(InterPro) | |
| Mch10g1837 | 1264 | SMART | kinesin_4 | 887 | 1217 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Mch10g1837 | 1264 | MobiDBLite | consensus disorder prediction | 1235 | 1264 | - | - | |
| Mch10g1837 | 1264 | Pfam | FERM central domain | 384 | 500 | IPR019748 | - | |
| Mch10g1837 | 1264 | ProSiteProfiles | Kinesin motor domain profile. | 889 | 1209 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Mch10g1837 | 1264 | SUPERFAMILY | Prismane protein-like | 832 | 893 | IPR011254 | GO:0003824(InterPro)|GO:0016491(InterPro) | |
| Mch10g1837 | 1264 | Gene3D | - | 1212 | 1260 | - | - | |
| Mch10g1837 | 1264 | PRINTS | Kinesin heavy chain signature | 960 | 981 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Mch10g1837 | 1264 | PRINTS | Kinesin heavy chain signature | 1079 | 1096 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Mch10g1837 | 1264 | PRINTS | Kinesin heavy chain signature | 1159 | 1180 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Mch10g1837 | 1264 | PRINTS | Kinesin heavy chain signature | 1110 | 1128 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Mch10g1837 | 1264 | ProSiteProfiles | FERM domain profile. | 279 | 593 | IPR000299 | GO:0005856(InterPro) | |
| Mch10g1837 | 1264 | FunFam | Kinesin-like calmodulin-binding protein (ZWICHEL) | 278 | 381 | - | - | |
| Mch10g1837 | 1264 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 677 | 1250 | IPR027640 | GO:0003777(InterPro)|GO:0007018(InterPro) | |
| Mch10g1837 | 1264 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Mch10g1837 | 1264 | SUPERFAMILY | PH domain-like | 499 | 587 | - | - | |
| Mch10g1837 | 1264 | Coils | Coil | 680 | 700 | - | - | |
| Mch10g1837 | 1264 | SUPERFAMILY | Second domain of FERM | 377 | 494 | IPR035963 | - | |
| Mch10g1837 | 1264 | Gene3D | - | 497 | 604 | IPR011993 | - | |
| Mch10g1837 | 1264 | SMART | MyTH4_1 | 115 | 274 | IPR000857 | GO:0005856(InterPro) | |
| Mch10g1837 | 1264 | CDD | FERM_C_KCBP | 496 | 604 | - | - | |
| Mch10g1837 | 1264 | Coils | Coil | 782 | 854 | - | - | |
| Mch10g1837 | 1264 | Pfam | Kinesin motor domain | 895 | 1209 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Mch10g1837 | 1264 | Gene3D | - | 391 | 492 | IPR014352 | - | |
| Mch10g1837 | 1264 | Coils | Coil | 617 | 665 | - | - | |
| Mch10g1837 | 1264 | FunFam | Kinesin-like calmodulin-binding protein (ZWICHEL) | 497 | 605 | - | - | |
| Mch10g1837 | 1264 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 889 | 1237 | IPR027417 | - | |
| Mch10g1837 | 1264 | Pfam | PTB domain (IRS-1 type) | 510 | 586 | IPR002404 | - | |
| Mch10g1837 | 1264 | Gene3D | Kinesin motor domain | 876 | 1211 | IPR036961 | - | |
| Mch10g1837 | 1264 | CDD | KISc_C_terminal | 887 | 1211 | - | - | |
| Mch10g1837 | 1264 | Gene3D | - | 278 | 382 | - | - | |
| Mch10g1837 | 1264 | SMART | B41_5 | 275 | 499 | IPR019749 | - | |
| Mch10g1837 | 1264 | FunFam | Kinesin-like calmodulin-binding protein | 833 | 1211 | - | - | |
| Mch10g1837 | 1264 | FunFam | Kinesin-like calmodulin binding protein | 382 | 493 | - | - | |
| Mch10g1837 | 1264 | ProSitePatterns | Kinesin motor domain signature. | 1109 | 1120 | IPR019821 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro) | |
| Mch10g1837 | 1264 | ProSiteProfiles | MyTH4 domain profile. | 115 | 274 | IPR000857 | GO:0005856(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch10g1837 | Mch-Chr10:17999991 | Mch8g2854 | Mch-Chr8:31422765 | 1.21E-72 | dispersed | |
| Mch10g1837 | Mch-Chr10:17999991 | Mch11g1149 | Mch-Chr11:8073718 | 1.08E-68 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch10g1837 | K27887 | - | csv:101206704 | 2228.75 |