Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0014 ATGCCGTTGCTCTTCCATCTTCTTCTTCCATTCATTCTTTTAGAATGTTCCCGCGTGGCCGTGGCCGACACCAAGCCAGGATGCCCTTCCAGCTGTGGAAACGTCACCGTTCCGTATCCTTTTGGCATGGGCCCGGGCTGCTCCATGGGCGCTGGGTTTGACATTACTTGCAATTCCTCCTACCATCCCCCAATACCCTTCATCGGAACTTCTAACCTTCAAGTTCTAGAAATTTCTTTGAGCCAGGCCCGCCTCCGCATACGCAACTTCGTGGCCTTCAATTGCTATTCCCAAACCGGGGCCCTCATCGACACATCCCCCTCCTGGATCAATCTGGGCCGCCTCCCTCTCTTCTTCTCCACAACCAACAAGTTCACCGTCATCGGGTGCGACACCTTGGCCCTCATCTCCGGCTCCCAGGGCCTCTCCTACACCAGCGGATGCGTTTCCTTGTGCGCCAACCAGGACTCCGTCATCAACGGCTCCTGCTCCGGCATCGGATGCTGCCAGACCGCCGTCCCCAGAGGCCTCAAGCGCTTCCAAAGCATCATTGGGAACCTCAACAACCATACCAAAATCTGGCAGTTCAACCCTTGCAGCTACGCCTTCCTAGTCGACCAAGAACGCTACACCTTCCATCCCTCTCATCTCGCCGACCCCACCTTTGGGTCCACCCTTACAAATTTGCCCGTGGTTCTCAACTGGGTGGTCGGTAACCGGACGTGCGAAGATGCTCGCAAGGGGTTGTCAGAGTATGTCTGCCAGCCCAATACCCAATGTTATGATTCCGAGAGCGGGAGCGGTTATCAGTGCCGGTGCAGCCAAGGCTTCAAAGGGAACCCATATCTCACTCCTGGATGCCAAGATATTGACGAGTGCGAGGGGGCTCCGGATAACAACCCTTGCGAAGGCATATGCGTGAATACCCCTGGAAGTTATTACTGTACGTGTCCCCATGGTTCCTACGGCGATGGTACCAAACACGGCAAGGGCTGCATCACCAAAACCAAGCAATTTCCGCTTGTTCAGCTCACTGTCGGTATTGGCTCCGCTCTCCTTCTTCTCGTCGTCGCAGCCACATGGGTTTACTTCACCCTCAAGAAGAGGAACCTCGTTAAACTCCGACAGAAATTCTTCCTCCAGAACGGGGGCTTGTTATTGCGGCAGCAGTTATCCCAACACGAACCCACCGTTGACTCCACTAAAATCTTCACCTCCGAGGAGCTTGAGAAAGCTACCGACAATTACGCGGAGACTCGAATCCTGGGCAGGGGCGGTAATGGGACTGTTTACAAAGGAATTCTACCAGACGGAAGAATAGTGGCGATTAAGAAGTCCAAGATTTCGGATGAGAGCCAAATCGAACAGTTCATCAACGAAGTCAGAATTCTGGCCCAAATCAACCACCGGAATGTGGTAAAGCTGATGGGGTGCTGCCTGGAGACGGAAGTTCCTCTGCTGGTCTACGAATTCGTGTCCAATGGGACTCTGCACGCCCACATTCACGAAAGTCAAAGCAGCACCTTCAATTCAATGTCTTGGGATGACCGTCTGAGAATAGCCACGGAGACGGCCGCCGCTCTGTCGTACCTGCACTCCGCAGCATCCACACCCATCATTCACAGAGACGTGAAGTCGGCGAACATATTGCTGGACAGGAAATGCACCGCCAAAGTGGCCGATTTCGGAGCTTCGAGGTTAATTCCAATGGACCGGTCCCAGATAACGACGCTGGTTCAGGGTACGTTCGGGTACTTGGACCCGGAATACTTCCAAACGAGTCAACTGACGGAGAAGAGCGACGTGTACAGCTTCGGGGTGGTTCTGGTGGAGCTGTTGACGGGGGAGCTGCCGGTGTCGTTCGATAGATCAGAATCGGAGAGAAACCTGTCGTCGTATTTTATAGCGTCGTTGCGGCAGAAGAGACTGTTTAGTATAGTGGATGGGAGGGTGCTGAGGGAGGGAAAGAGAGAGGAAGTAATAGGAGCGGCGGAGTTGGCGAGGAAATGCCTGAAGCTGAAGGGGGACGAGAGGCCCACGATGAGGCAAGTGGTGGTGGAGCTCGAAGGCTTGAAAAGGTATGGGGAAGACACAGAAACTCTGCTGGAACCGGAACCAGAAGGGGAACTGGAAGGGCAACAACATGAGCCTGAGGCCGAGGATTCATACCCCATATCCATCTCTGCCTTCCAACCTCATGCTTACGCTTACGGTGCGCCCCGGTGA 2226 54.22 MPLLFHLLLPFILLECSRVAVADTKPGCPSSCGNVTVPYPFGMGPGCSMGAGFDITCNSSYHPPIPFIGTSNLQVLEISLSQARLRIRNFVAFNCYSQTGALIDTSPSWINLGRLPLFFSTTNKFTVIGCDTLALISGSQGLSYTSGCVSLCANQDSVINGSCSGIGCCQTAVPRGLKRFQSIIGNLNNHTKIWQFNPCSYAFLVDQERYTFHPSHLADPTFGSTLTNLPVVLNWVVGNRTCEDARKGLSEYVCQPNTQCYDSESGSGYQCRCSQGFKGNPYLTPGCQDIDECEGAPDNNPCEGICVNTPGSYYCTCPHGSYGDGTKHGKGCITKTKQFPLVQLTVGIGSALLLLVVAATWVYFTLKKRNLVKLRQKFFLQNGGLLLRQQLSQHEPTVDSTKIFTSEELEKATDNYAETRILGRGGNGTVYKGILPDGRIVAIKKSKISDESQIEQFINEVRILAQINHRNVVKLMGCCLETEVPLLVYEFVSNGTLHAHIHESQSSTFNSMSWDDRLRIATETAAALSYLHSAASTPIIHRDVKSANILLDRKCTAKVADFGASRLIPMDRSQITTLVQGTFGYLDPEYFQTSQLTEKSDVYSFGVVLVELLTGELPVSFDRSESERNLSSYFIASLRQKRLFSIVDGRVLREGKREEVIGAAELARKCLKLKGDERPTMRQVVVELEGLKRYGEDTETLLEPEPEGELEGQQHEPEAEDSYPISISAFQPHAYAYGAPR 741
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 126025 128604 - MC11g0011 Mch11g0014 678948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0014 741 Pfam Wall-associated receptor kinase galacturonan-binding 28 87 IPR025287 GO:0030247(InterPro)
Mch11g0014 741 Gene3D Laminin 239 291 - -
Mch11g0014 741 Gene3D Phosphorylase Kinase; domain 1 387 491 - -
Mch11g0014 741 ProSiteProfiles EGF-like domain profile. 289 327 IPR000742 -
Mch11g0014 741 CDD STKc_IRAK 422 691 - -
Mch11g0014 741 MobiDBLite consensus disorder prediction 696 725 - -
Mch11g0014 741 SMART egf_5 241 288 IPR000742 -
Mch11g0014 741 SMART egf_5 292 333 IPR000742 -
Mch11g0014 741 ProSitePatterns Protein kinases ATP-binding region signature. 422 445 IPR017441 GO:0005524(InterPro)
Mch11g0014 741 CDD EGF_CA 289 324 - -
Mch11g0014 741 FunFam Wall-associated receptor kinase 2 492 709 - -
Mch11g0014 741 SUPERFAMILY Growth factor receptor domain 236 322 IPR009030 -
Mch11g0014 741 ProSiteProfiles Protein kinase domain profile. 416 691 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0014 741 SMART serkin_6 416 691 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0014 741 Pfam Calcium-binding EGF domain 289 322 IPR049883 -
Mch11g0014 741 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 306 317 IPR000152 -
Mch11g0014 741 SUPERFAMILY Protein kinase-like (PK-like) 393 689 IPR011009 -
Mch11g0014 741 FunFam Wall-associated receptor kinase 2 386 491 - -
Mch11g0014 741 FunFam Wall-associated receptor kinase 2 240 287 - -
Mch11g0014 741 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0014 741 ProSiteProfiles EGF-like domain profile. 244 288 IPR000742 -
Mch11g0014 741 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 24 697 IPR045274 GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0007166(PANTHER)|GO:0007166(InterPro)
Mch11g0014 741 Gene3D Transferase(Phosphotransferase) domain 1 492 703 - -
Mch11g0014 741 Gene3D Laminin 292 334 - -
Mch11g0014 741 ProSitePatterns Calcium-binding EGF-like domain signature. 289 315 IPR018097 GO:0005509(InterPro)
Mch11g0014 741 SMART egfca_6 289 333 IPR001881 GO:0005509(InterPro)
Mch11g0014 741 FunFam Fibrillin 2 288 329 - -
Mch11g0014 741 Pfam Protein kinase domain 416 685 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0014 Mch-Chr11:126025 Mch11g1350 Mch-Chr11:9638304 2.15E-209 dispersed
Mch11g0014 Mch-Chr11:126025 Mch8g1280 Mch-Chr8:9295705 4.86E-68 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77035 PF00069 Pkinase 9.70E-51 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0014 - - - 0.0