Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0017 CCATCGATGGCAATGGCGATACTTCAGCCACACACTTCACCTTCTGCGATTCCATCTTCCTCCGCTTCATTCTACGGGAGTTCTCTTCAGCAACCCCGTTTATCAAATCTTCGAAACAGCCGCTCCGTTCCCTATCGCTCCACTTGCAAAGCTTCCTGGCAGGAGCTTGCGGGGGTTCTGATATTCTCCGCTATTCCCTTCACGGCTGTGAAAGCCATCGCCAATAGTCCACTCGGAGAGTCGCTCCAGAGACAAATGGAAAAGAAGAAAGAAGCTGCCATAGCCAACTCTTCCAAGTTCAAGGCTCTCGCTAGGGAGGCTAGAAAAGATAGTTCCTGGTATGGAGAAGAGCGTCCTCGCTGGCTTGGTCCAATACCATATGAGTATCCAAAATATCTAACAGGTGATCTGCCAGGTGACTATGGGTTCGACATTGCAGGCCTGAGCAAGGATCCCGTGGCTTTTCAGAAGTACTTCAACTTTGAAATACTGCATGCTCGTTGGGCTATGTTGGCATCCCTTGGGGCTTTAATACCAGAGATCCTAGATATTTCTGGAGCATTTCATTTCAGCGAACCCATCTGGTGGCGTGTAGGCTATTCAAAGCTTAAGGGTGATACACTCGACTATCTTGGAATACCAGGGCTGCATTTAGCTGGAAGCCAAGGAGTGATTGTCATTGCAATATGCCAAGTCATTTTAATGGTTGGTCCTGAGTACGCAAGATATTGTGGTATAGAGGCATTGGAGCCCCTGGGAATATACCTGCCCGGGGATATAAATTATCCAGGTGGTGTGTTGTTTGATCCCTTGAACCTGTCCAAGGATGCTGCAGCATTTGAGGAACTGAAGGTAAAAGAGATTAAAAATGGGCGGTTAGCCATGGTTGCCTGGCTAGGATTTTACAGTCAAGCAGCATTGACGGGTAAGGGACCAGTCCAAAACCTTCTCGAACATATTTCTGATCCTTTCCACAATAACTTCCTTTCCCTGCTCAACTCTTGGTAA 1008 47.62 PSMAMAILQPHTSPSAIPSSSASFYGSSLQQPRLSNLRNSRSVPYRSTCKASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRQMEKKKEAAIANSSKFKALAREARKDSSWYGEERPRWLGPIPYEYPKYLTGDLPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAMLASLGALIPEILDISGAFHFSEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQVILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLEHISDPFHNNFLSLLNSW 335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 145821 150734 - MC11g0014 Mch11g0017 678951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0017 335 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 75 330 IPR001344 GO:0009416(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro)
Mch11g0017 335 Pfam Chlorophyll A-B binding protein 130 305 IPR022796 -
Mch11g0017 335 FunFam Chlorophyll a-b binding protein, chloroplastic 120 332 - -
Mch11g0017 335 SUPERFAMILY Chlorophyll a-b binding protein 112 333 - -
Mch11g0017 335 Gene3D Chlorophyll a/b binding protein domain 120 332 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0017 Mch-Chr11:145821 Mch4g0334 Mch-Chr4:2087671 5.72E-66 dispersed
Mch11g0017 Mch-Chr11:145821 Mch1g2002 Mch-Chr1:19602157 8.87E-64 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0017 K14172 - csv:101209460 585.874