Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0024 ATGGCTACGGTGGCGAGGAAGGGTAAAGTTTGTGTGACGGGGGCTGGAGGGTTTATTGGTTCGTGGGTCGTCAAGCTTCTGCTATCTAGGGATTATATTGTCCACGGAACTGTGAGGGAGCCCGGAGATGCGAAGTATGCTCACTTGAGAAAACTTGAGAAAGGGACTGAGAATCTGGAACTGTTTAAGGCTGATTTACTGGACTATGAGTCTCTGCGTTCTGCAATTGCAGGATGTGAAGGAGTTTTCCATGTTGCCAGTCCAGTTCCTTCCACAACTTCATCAAACCCAGAGACAGAAGTGATAGAACCTGCTGTAAAGGGCACACTTAATGTGCTTGAAGCATGTCTGGAAGCGAAAGTTAAGCGAGTGGTTGTAGTATCGTCTGTTGCTGCAGTAGTTTTCAATCCAAGTTGGCCTCAAGGTCAAGTAATGGATGAAAGTTGTTGGTCTGATAAGGAATACTGCAAAGCTACTAAGAACTGGTATTTTCTGTCAAAAACAGAAGCCGAAAGTGAAGCCTTGGAGTTTGGGAAAAGACGTGGGCTTGACGTGGTAACTGTTTGTCCTAGCTTCGTTATGGGGCCAATTTTGCAGCCAACAGTCAACGCCAGCACCCTGGTTATACTTAAGCTTCTGAAAGAAGGATACGAGTCGGTGGAAAATAGGGTACGAACGATAGTAGACGTACGAGACGTAGGGGAGGCGTTACTTCTTGTGTACGAGAAGGGTGAAGCGGAAGGAAGGTACATATGTACAGCGCATACTGTGGAGACAAGGGAGATGGTGGATATATTGAAGAGCAAGTGCCCTGATTTTAACTATCCGAAGAAGTTTATTGAAGTGAAGAAGGATTGGGGCATTGCGAGCTCGGAGAGGTTGCAGAGATTGGGGTGGAGGTATCGGGCGTTGGAGGACACGCTTGGGGATGCTGTCCACAGTTTCAAAGACGCGGCCTTGTTGCACTGA 969 47.47 MATVARKGKVCVTGAGGFIGSWVVKLLLSRDYIVHGTVREPGDAKYAHLRKLEKGTENLELFKADLLDYESLRSAIAGCEGVFHVASPVPSTTSSNPETEVIEPAVKGTLNVLEACLEAKVKRVVVVSSVAAVVFNPSWPQGQVMDESCWSDKEYCKATKNWYFLSKTEAESEALEFGKRRGLDVVTVCPSFVMGPILQPTVNASTLVILKLLKEGYESVENRVRTIVDVRDVGEALLLVYEKGEAEGRYICTAHTVETREMVDILKSKCPDFNYPKKFIEVKKDWGIASSERLQRLGWRYRALEDTLGDAVHSFKDAALLH 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 190773 195123 - MC11g0021 Mch11g0024 678958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0024 322 Gene3D - 2 322 - -
Mch11g0024 322 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 316 IPR036291 -
Mch11g0024 322 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 312 IPR050425 GO:0016616(PANTHER)
Mch11g0024 322 Pfam NAD dependent epimerase/dehydratase family 10 246 IPR001509 -
Mch11g0024 322 FunFam NAD(P)-binding Rossmann-fold superfamily protein 3 322 - -
Mch11g0024 322 CDD FR_SDR_e 10 299 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0024 Mch-Chr11:190773 Mch8g1070 Mch-Chr8:7576715 2.75E-88 dispersed
Mch11g0024 Mch-Chr11:190773 Mch9g0463 Mch-Chr9:3434303 3.96E-92 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0024 - - - 0.0