Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch11g0029 | ATGGAGAAGGGGCCGACCACTGTATCAGCCATGGAGGCGTTCGAGAAGCTGGAGAAGGTCGGAGAAGGGACTTATGGCAAAGTTTACAGGGCAAGGGAGAAGGCCACCGGCAAGATTGTTGCTCTCAAGAAGACGCGCCTCCACGAGGATGAGGAAGGTGTTCCTCCCACCACTCTTAGAGAGGTTTCAATTCTTCGAATGCTTTCTAGGGATCCTCATATTGTTAGGCTTATGGACGTCAAACAAGGCCAGAACAAGGAAGGGAAAACAGTTCTTTACTTGGTGTTTGAATACATGGATACTGATTTGAAAAAATTCATTAAGAGTTTCCGTGGTACGGGAGAATCCATTCCCGTCAACACTGTCAAGAGTTTGATGTACCAACTCTGCAAGGGCGTTGCTTTCTGCCATGGTCATGGTATCCTGCACAGGGACCTGAAACCACACAATCTATTGATGGACCGAAAGACCATGATGCTCAAAATTGCAGATCTTGGGCTCGCTCGAGCATTTACTGTGCCAATTAAGAAGTACACTCATGAGGCAAGCCTGATTTTTCTGGGTTTTATTCTAACCCTCTGGTATAGAGCTCCCGAAGTTCTTTTGGGGACTACTCATTACTCTACAGCAGTAGATATGTGGTCTGTTGGCTGCATATTTGCCGAACTTGCCACGAAGCAAGCGCTCTTTCCCGGAGATTCTGAGTTGCAACAGCTCCTTCATATCTTCAGGCTATTAGGAACCCCAAATGAAAAAGTTTGGCCAGGTGTGAGCAAACTAATGAACTGGCATGAGTACCCCCAGTGGAGCCCCCAAAGCCTCTCAACTGCTGTCCCCAACTTGGATGATAAAGGGCTAGATCTGCTTTCAAAAATGCTCAAGTATGAACCCTCAATGCGTATTTCAGCAAAGAAAGCAATGGAACATCCTTACTTTGATGATTTGAACAAGGCATATCTCTGA | 963 | 46.31 | MEKGPTTVSAMEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHIVRLMDVKQGQNKEGKTVLYLVFEYMDTDLKKFIKSFRGTGESIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKKYTHEASLIFLGFILTLWYRAPEVLLGTTHYSTAVDMWSVGCIFAELATKQALFPGDSELQQLLHIFRLLGTPNEKVWPGVSKLMNWHEYPQWSPQSLSTAVPNLDDKGLDLLSKMLKYEPSMRISAKKAMEHPYFDDLNKAYL | 320 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 216462 | 220004 | - | MC11g0025 | Mch11g0029 | 678963 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch11g0029 | 320 | PANTHER | CELL DIVISION PROTEIN KINASE | 14 | 312 | IPR050108 | GO:0000082(PANTHER)|GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0004693(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)|GO:0010033(PANTHER)|GO:0010389(PANTHER)|GO:0010468(PANTHER)|GO:0030332(PANTHER) | |
Mch11g0029 | 320 | Pfam | Protein kinase domain | 14 | 312 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch11g0029 | 320 | SUPERFAMILY | Protein kinase-like (PK-like) | 9 | 316 | IPR011009 | - | |
Mch11g0029 | 320 | FunFam | Cyclin-dependent kinase B2,2 | 10 | 100 | - | - | |
Mch11g0029 | 320 | Gene3D | Phosphorylase Kinase; domain 1 | 9 | 100 | - | - | |
Mch11g0029 | 320 | Gene3D | Transferase(Phosphotransferase) domain 1 | 102 | 319 | - | - | |
Mch11g0029 | 320 | SMART | serkin_6 | 14 | 312 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch11g0029 | 320 | FunFam | Cyclin-dependent kinase 2 | 102 | 319 | - | - | |
Mch11g0029 | 320 | ProSiteProfiles | Protein kinase domain profile. | 14 | 312 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch11g0029 | 320 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 141 | 153 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch11g0029 | 320 | ProSitePatterns | Protein kinases ATP-binding region signature. | 20 | 43 | IPR017441 | GO:0005524(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g0029 | Mch-Chr11:216462 | Mch1g0587 | Mch-Chr1:10075525 | 8.34E-148 | dispersed | |
Mch4g1248 | Mch-Chr4:14464726 | Mch11g0029 | Mch-Chr11:216462 | 3.35E-14 | dispersed | |
Mch11g0029 | Mch-Chr11:216462 | Mch9g2347 | Mch-Chr9:23460276 | 8.12E-82 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77036 | PF00069 | Pkinase | 1.80E-69 | CL0016 | Mch | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch11g0029 | K07760 | - | csv:101208001 | 614.764 |