Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0033 ATGAGAGGCCTCAAAGTGCTTTCCGCTCTGGACACTGCCAAAACCCAATTGTACCATTTCAAGGCCATAGTCATCGCCGGGATGGGGCTTTTCACCGACGCCTACGATCTCTTCAGCATCACTCCAATTATGACGCTAATCGGCCGCGTCTACTACCACGACCAACCTAATTACGACGCTCCCCCCGCCCTCAAATCCACCATGTTGGCCGTCGCCCTTCTCGGCACCGCCACCGGCCAACTCGTCTTCGGCATACTCGGCGACCGAGTCGGGCGGCGGCGCGTCTACGGCCTCGCATTGGCGCTCATGGTGCTCAGTTCCGTCGGGTGCGGGTTCTCAATCTGCACCACGCGCCCCTGCGTCCTCCTCAGCCTCGGATTCTTCAGATTCCTTCTGGGACTCGGAATTGGCGGAGACTACCCACTGTCGGCGACCATAATGTCCGAGTTCGCGAACAAGAAGACACGTGGCTCGTTCATAGCGGCCGTGTTCTCGATGCAGGGGTTTGGGATTCTGGCCAGCTCCACGGTGACGATGATCGTGTGTTCGATATTCGATCGGGCGTCGAAGGATCAGACGCCCAAGGGGGCGGATATTGCGTGGAGGTTGATACTCATGCTGGGCGCCGTGCCGGCCGCCCTGACTTATTACTGGCGGATGATGATGCCCGAAACTGCCAGATACACGGCTCTGGTGGAGCGGAATGTGGCTCAAGCGGCGAAGGACATGGAGAAAGTGCTGGATGTGCCGTTGGGCGATATCTTAGAGACAGAGGGCAGTCCCCTGTCCCCCTGTCCCCCAAACTTCTCCTTCTTTTCGAAGGAATTCCTCCGCCGCCACGGCCGCGACCTCTTCTCCTGCGCCGCCGCTTGGTTTCTGGTGGACATCGTATTCTACAGCAGCAACCTGTTCCAGTCCCAGATATACGACCGCTACCTTCCCCCACCACAAAACGTCAACGTTTTCCGCGACGCCTTCAACGACGCCAAGCTCCAGGCCATCGTGGCCGTGTGCTCCACAATCCCGGGCTACTGGGTCGCCGTCTACTTCATCGACCGGATGGGCAGAGTGAAGATCCAGAGCATGGGGTTCTTGTTGATGGCCGCTGGGTATCTGAGCATCGCCATCCCCTACAACAGATACTGGGCCGCCGCCCCCAACATTGGGTTCATGGTCCTCTACTGCCTCACCTTCTTCTTCTCCAACTTCGGCCCCAACACCACCACCTTCATTCTCCCGGCCGAGCTGTTCCCGGCCAGATTCAGGTCCACCTGCCACGGAATCTCCGGCGCGGCGGGGAAGATGGGGGCCATAATCGGGGCGGTGGGGTTCCTGTGGGCTTCGCACGACCAGAAGGCGAACGGGTACCCCAGAGGAATTGGGATGAGGGCGTCGCTGATGATGCTGGGCGGGGTCAGCCTCGCGGGACTGCTGCTCACATATTTCTTCACCAGAGAAACCACCGGAAGGTCGTTGGAAGACAACGAGAACGAAGATGAATACGCCGGACGTTACGTCGTCAGGTGTCCCTCTTTGTGTTTGGCACGCACCACCCTTCCCTAA 1563 59.18 MRGLKVLSALDTAKTQLYHFKAIVIAGMGLFTDAYDLFSITPIMTLIGRVYYHDQPNYDAPPALKSTMLAVALLGTATGQLVFGILGDRVGRRRVYGLALALMVLSSVGCGFSICTTRPCVLLSLGFFRFLLGLGIGGDYPLSATIMSEFANKKTRGSFIAAVFSMQGFGILASSTVTMIVCSIFDRASKDQTPKGADIAWRLILMLGAVPAALTYYWRMMMPETARYTALVERNVAQAAKDMEKVLDVPLGDILETEGSPLSPCPPNFSFFSKEFLRRHGRDLFSCAAAWFLVDIVFYSSNLFQSQIYDRYLPPPQNVNVFRDAFNDAKLQAIVAVCSTIPGYWVAVYFIDRMGRVKIQSMGFLLMAAGYLSIAIPYNRYWAAAPNIGFMVLYCLTFFFSNFGPNTTTFILPAELFPARFRSTCHGISGAAGKMGAIIGAVGFLWASHDQKANGYPRGIGMRASLMMLGGVSLAGLLLTYFFTRETTGRSLEDNENEDEYAGRYVVRCPSLCLARTTLP 520
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 232670 235837 + MC11g0029 Mch11g0033 678967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0033 520 Pfam Sugar (and other) transporter 24 495 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Mch11g0033 520 ProSitePatterns Sugar transport proteins signature 2. 131 156 IPR005829 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Mch11g0033 520 SUPERFAMILY MFS general substrate transporter 10 498 IPR036259 -
Mch11g0033 520 ProSiteProfiles Major facilitator superfamily (MFS) profile. 22 488 IPR020846 GO:0022857(InterPro)
Mch11g0033 520 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 7 495 - -
Mch11g0033 520 FunFam Inorganic phosphate transporter 1-6 18 505 - -
Mch11g0033 520 Gene3D MFS general substrate transporter like domains 18 507 IPR036259 -
Mch11g0033 520 CDD MFS_PhT 23 487 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0033 Mch-Chr11:232670 Mch4g1756 Mch-Chr4:20598085 1.47E-180 dispersed
Mch11g0033 Mch-Chr11:232670 Mch7g0960 Mch-Chr7:13996283 2.05E-182 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0033 K08176 - csv:101218554 805.053