Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch11g0033 | ATGAGAGGCCTCAAAGTGCTTTCCGCTCTGGACACTGCCAAAACCCAATTGTACCATTTCAAGGCCATAGTCATCGCCGGGATGGGGCTTTTCACCGACGCCTACGATCTCTTCAGCATCACTCCAATTATGACGCTAATCGGCCGCGTCTACTACCACGACCAACCTAATTACGACGCTCCCCCCGCCCTCAAATCCACCATGTTGGCCGTCGCCCTTCTCGGCACCGCCACCGGCCAACTCGTCTTCGGCATACTCGGCGACCGAGTCGGGCGGCGGCGCGTCTACGGCCTCGCATTGGCGCTCATGGTGCTCAGTTCCGTCGGGTGCGGGTTCTCAATCTGCACCACGCGCCCCTGCGTCCTCCTCAGCCTCGGATTCTTCAGATTCCTTCTGGGACTCGGAATTGGCGGAGACTACCCACTGTCGGCGACCATAATGTCCGAGTTCGCGAACAAGAAGACACGTGGCTCGTTCATAGCGGCCGTGTTCTCGATGCAGGGGTTTGGGATTCTGGCCAGCTCCACGGTGACGATGATCGTGTGTTCGATATTCGATCGGGCGTCGAAGGATCAGACGCCCAAGGGGGCGGATATTGCGTGGAGGTTGATACTCATGCTGGGCGCCGTGCCGGCCGCCCTGACTTATTACTGGCGGATGATGATGCCCGAAACTGCCAGATACACGGCTCTGGTGGAGCGGAATGTGGCTCAAGCGGCGAAGGACATGGAGAAAGTGCTGGATGTGCCGTTGGGCGATATCTTAGAGACAGAGGGCAGTCCCCTGTCCCCCTGTCCCCCAAACTTCTCCTTCTTTTCGAAGGAATTCCTCCGCCGCCACGGCCGCGACCTCTTCTCCTGCGCCGCCGCTTGGTTTCTGGTGGACATCGTATTCTACAGCAGCAACCTGTTCCAGTCCCAGATATACGACCGCTACCTTCCCCCACCACAAAACGTCAACGTTTTCCGCGACGCCTTCAACGACGCCAAGCTCCAGGCCATCGTGGCCGTGTGCTCCACAATCCCGGGCTACTGGGTCGCCGTCTACTTCATCGACCGGATGGGCAGAGTGAAGATCCAGAGCATGGGGTTCTTGTTGATGGCCGCTGGGTATCTGAGCATCGCCATCCCCTACAACAGATACTGGGCCGCCGCCCCCAACATTGGGTTCATGGTCCTCTACTGCCTCACCTTCTTCTTCTCCAACTTCGGCCCCAACACCACCACCTTCATTCTCCCGGCCGAGCTGTTCCCGGCCAGATTCAGGTCCACCTGCCACGGAATCTCCGGCGCGGCGGGGAAGATGGGGGCCATAATCGGGGCGGTGGGGTTCCTGTGGGCTTCGCACGACCAGAAGGCGAACGGGTACCCCAGAGGAATTGGGATGAGGGCGTCGCTGATGATGCTGGGCGGGGTCAGCCTCGCGGGACTGCTGCTCACATATTTCTTCACCAGAGAAACCACCGGAAGGTCGTTGGAAGACAACGAGAACGAAGATGAATACGCCGGACGTTACGTCGTCAGGTGTCCCTCTTTGTGTTTGGCACGCACCACCCTTCCCTAA | 1563 | 59.18 | MRGLKVLSALDTAKTQLYHFKAIVIAGMGLFTDAYDLFSITPIMTLIGRVYYHDQPNYDAPPALKSTMLAVALLGTATGQLVFGILGDRVGRRRVYGLALALMVLSSVGCGFSICTTRPCVLLSLGFFRFLLGLGIGGDYPLSATIMSEFANKKTRGSFIAAVFSMQGFGILASSTVTMIVCSIFDRASKDQTPKGADIAWRLILMLGAVPAALTYYWRMMMPETARYTALVERNVAQAAKDMEKVLDVPLGDILETEGSPLSPCPPNFSFFSKEFLRRHGRDLFSCAAAWFLVDIVFYSSNLFQSQIYDRYLPPPQNVNVFRDAFNDAKLQAIVAVCSTIPGYWVAVYFIDRMGRVKIQSMGFLLMAAGYLSIAIPYNRYWAAAPNIGFMVLYCLTFFFSNFGPNTTTFILPAELFPARFRSTCHGISGAAGKMGAIIGAVGFLWASHDQKANGYPRGIGMRASLMMLGGVSLAGLLLTYFFTRETTGRSLEDNENEDEYAGRYVVRCPSLCLARTTLP | 520 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 232670 | 235837 | + | MC11g0029 | Mch11g0033 | 678967 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch11g0033 | 520 | Pfam | Sugar (and other) transporter | 24 | 495 | IPR005828 | GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro) | |
Mch11g0033 | 520 | ProSitePatterns | Sugar transport proteins signature 2. | 131 | 156 | IPR005829 | GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro) | |
Mch11g0033 | 520 | SUPERFAMILY | MFS general substrate transporter | 10 | 498 | IPR036259 | - | |
Mch11g0033 | 520 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 22 | 488 | IPR020846 | GO:0022857(InterPro) | |
Mch11g0033 | 520 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 7 | 495 | - | - | |
Mch11g0033 | 520 | FunFam | Inorganic phosphate transporter 1-6 | 18 | 505 | - | - | |
Mch11g0033 | 520 | Gene3D | MFS general substrate transporter like domains | 18 | 507 | IPR036259 | - | |
Mch11g0033 | 520 | CDD | MFS_PhT | 23 | 487 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g0033 | Mch-Chr11:232670 | Mch4g1756 | Mch-Chr4:20598085 | 1.47E-180 | dispersed | |
Mch11g0033 | Mch-Chr11:232670 | Mch7g0960 | Mch-Chr7:13996283 | 2.05E-182 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch11g0033 | K08176 | - | csv:101218554 | 805.053 |