Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0044 ATGGCTACGGGTATAGATTTTTCACCTCCCTTCACCCTACTAGAAGGCGGCGGATACAATAAGGACAATGTATCACCGACGAATGATGAAAGTTCTGATAGCTTTAATAGTTTGAAACAGATGACCAGTGGGAAACCTCCCCGGCACCTCTCAGTTATGCGGCATAGTGTGAGCTCCATAAAGCTGCTAGGCCAAGCTGATTTAAGCTTGGATGCTGAAACTCTTGGCAATAAGTCGCCTGATGGAAAAGCAGGATACTTACCTGTCTTTAGATCGGGTAGCTGTTCAGAAAGGGGACCTAAACAGTACATGGAAGACGAGCATATATGCATAGATGATCTTGTTGGACATATCCATGCATGTGAAGATTTCACTTCTCCTGGAGCTTTCTATGGTGTATTTGATGGCCATGGGGGTAAAGACGCAGCAGCTTTTGTTAGAAATAACATCCTCAGATTCATAGTCGAAGACTCATGTTTCCCAATTTGTGTTGAGAAGGCAATTAAGAGTGCTTTTATGAAAGCCGATTATGCATTTGCTGATGCTAGTTCTATGGATATCTCGTCCGGCACAACTGCTCTAACTGCTTTCATCTTTGGAAGGACAATGATAATTGCGAATGCTGGAGATTGTCGAGCTGTTCTGGGGAGGAGGGGCAAGGCAATTGAGGTGTCGAAGGATCACAAGCCCAACTGTGCATCTGAAAAACTTAGAATTGAGAAGCTTGGCGGAGTGATTTATGATGGCTACCTGAATGGCCAGTTATCTGTTGCTCGTGCTCTAGGAGACTGGCACATGAAAGGTGCCAAGGGTTCTGCATGCCCACTGAGTGCAGAGCCAGAGCTGCAGGAATTGCATTTGAAAGAGGAAGATGAATTCCTGATAATGGGGTGCGATGGGCTTTGGGATGTCATGAGCAGTCAGTGTGCTGTTACAATGGCAAGGAAAGAGCTGATGCTACATAATGATCCTGAAAGATGTTCAAGAGAGCTGGTAAGGGAGGCACTAAAGCGCAACACATGCGATAATTTAACCGTTATCGTGGTCTGTTTTTCCGCTGATCCACCCCCTCGGATAGAAGTACCTCCAACTCGAGTAAGGAGAAGCATATCATTAGAAGGGCTGAATTTGTTGAAAGGCGTACTGGACTGCAATTCATGA 1161 45.39 MATGIDFSPPFTLLEGGGYNKDNVSPTNDESSDSFNSLKQMTSGKPPRHLSVMRHSVSSIKLLGQADLSLDAETLGNKSPDGKAGYLPVFRSGSCSERGPKQYMEDEHICIDDLVGHIHACEDFTSPGAFYGVFDGHGGKDAAAFVRNNILRFIVEDSCFPICVEKAIKSAFMKADYAFADASSMDISSGTTALTAFIFGRTMIIANAGDCRAVLGRRGKAIEVSKDHKPNCASEKLRIEKLGGVIYDGYLNGQLSVARALGDWHMKGAKGSACPLSAEPELQELHLKEEDEFLIMGCDGLWDVMSSQCAVTMARKELMLHNDPERCSRELVREALKRNTCDNLTVIVVCFSADPPPRIEVPPTRVRRSISLEGLNLLKGVLDCNS 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 286097 290569 + MC11g0039 Mch11g0044 678978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0044 386 ProSiteProfiles PPM-type phosphatase domain profile. 91 351 IPR001932 -
Mch11g0044 386 ProSitePatterns PPM-type phosphatase domain signature. 130 138 IPR000222 GO:0043169(InterPro)
Mch11g0044 386 Pfam Protein phosphatase 2C 92 343 IPR001932 -
Mch11g0044 386 SUPERFAMILY PP2C-like 85 352 IPR036457 -
Mch11g0044 386 MobiDBLite consensus disorder prediction 16 49 - -
Mch11g0044 386 Gene3D - 76 354 IPR036457 -
Mch11g0044 386 MobiDBLite consensus disorder prediction 21 44 - -
Mch11g0044 386 SMART PP2C_SIG_2 106 351 IPR001932 -
Mch11g0044 386 SMART PP2C_4 81 349 IPR001932 -
Mch11g0044 386 FunFam Probable protein phosphatase 2C 22 76 354 - -
Mch11g0044 386 CDD PP2Cc 90 351 IPR001932 -
Mch11g0044 386 PANTHER PROTEIN PHOSPHATASE 2C 69 351 IPR015655 GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0044 Mch-Chr11:286097 Mch9g0624 Mch-Chr9:4663637 2.40E-104 dispersed
Mch11g0044 Mch-Chr11:286097 Mch8g3003 Mch-Chr8:32638254 6.19E-103 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0044 K14803 - csv:101205355 751.895