Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch11g0054 ATGAGCTGCTTTTCTTGCATTCGTACTCGCTGTAAAGACGCCAGCAAGGTCGAAATCGATAATGGGAGTGGGAGAGGAAAGTCGTATTGGAATGAAACTGGAAAGGGGAAGGAATCACAAAGCAGAAGCGGAAACAACCGGAAATGCGGGGCTGCGCGGAGCTTCCAGTTTCGTGAACTGGCAACGGCCACGAGAGGTTTCAAGGAAGTGAACTTGATTGGTGAAGGGGGTTTTGGAAGGGTTTACAAAGGCCGATTAGAAACGGGCCAGGTCGTTGCGATTAAACAACTCAATCATGACGGTCTTCAAGGATTTCAGGAATTCATCGTCGAAGTTCTCATGCTAAGCTTATTGCATCATTGTAATCTTGTTACCTTGATTGGTTATTGTACTGATGGAGATCAAAGACTGTTGGTTTACGAGTATATGTCGATGGGAAGCTTGGAAAACCATCTTTTTGGCTTGTCCCCCGAAAGACCACCATTGAGTTGGAACACCCGAATCAAGATTGCCCTTGGTGCAGCCCGGGGCCTCGAGTATCTTCACTGCACAGCCAATCCACCAGTCATCTACCGTGACTTGAAATCTGCAAATATTTTACTAGACGATGACTTCAATCCAAAGCTCTCGGATTTTGGACTGGCTAAGTTAGCACCGGTCGGTGACAACACCCATGTTTCCACCAGAGTGATGGGAACATATGGTTATTGTGCTCCGGAGTATGCCATGAGCGGCAAACTGACTCTTAAATCTGATATCTATTGCTTTGGTGTGGTTCTCTTGGAGATAATTACAGGTAGGAAAGCCATAGACTGCACCAAGAAACCTGGAGAGCAAAATCTGGTCGCTTGGTCTCGCCCTTTTCTGAAGGACCGGAGGAAGTTCGTTCAATTAGTTGACCCGCTACTGGAAGGACGATACCCTCTTCGATGTCTTCACCATGCAATCGCAATTGCTGCAATGTGCCTCCAGGAGCAGCCAACGTTCCGGCCAATTATCAGTGATATCGTTGTAGCTCTTGAGTACTTAGTTTCTCAGAGTCACGCATCAGAACAATCATGGGACGGGGCACCTAGTCCCTCCAAACGATCTCCTCAACAGGGTAGGAGCATCCATGTTCAAGAAACAAGATATGGAAGGAGTTCAACAACCATATAA 1158 46.98 MSCFSCIRTRCKDASKVEIDNGSGRGKSYWNETGKGKESQSRSGNNRKCGAARSFQFRELATATRGFKEVNLIGEGGFGRVYKGRLETGQVVAIKQLNHDGLQGFQEFIVEVLMLSLLHHCNLVTLIGYCTDGDQRLLVYEYMSMGSLENHLFGLSPERPPLSWNTRIKIALGAARGLEYLHCTANPPVIYRDLKSANILLDDDFNPKLSDFGLAKLAPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYCFGVVLLEIITGRKAIDCTKKPGEQNLVAWSRPFLKDRRKFVQLVDPLLEGRYPLRCLHHAIAIAAMCLQEQPTFRPIISDIVVALEYLVSQSHASEQSWDGAPSPSKRSPQQGRSIHVQETRYGRSSTTI 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 338613 342441 + MC11g0049 Mch11g0054 678988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch11g0054 385 SUPERFAMILY Protein kinase-like (PK-like) 48 341 IPR011009 -
Mch11g0054 385 CDD STKc_IRAK 73 341 - -
Mch11g0054 385 MobiDBLite consensus disorder prediction 33 48 - -
Mch11g0054 385 Gene3D Phosphorylase Kinase; domain 1 37 142 - -
Mch11g0054 385 SMART serkin_6 67 343 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0054 385 ProSiteProfiles Protein kinase domain profile. 67 343 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch11g0054 385 ProSitePatterns Protein kinases ATP-binding region signature. 73 95 IPR017441 GO:0005524(InterPro)
Mch11g0054 385 Gene3D Transferase(Phosphotransferase) domain 1 143 359 - -
Mch11g0054 385 PANTHER OS07G0668900 PROTEIN 37 359 - -
Mch11g0054 385 MobiDBLite consensus disorder prediction 351 385 - -
Mch11g0054 385 FunFam probable serine/threonine-protein kinase RLCKVII 37 142 - -
Mch11g0054 385 FunFam Serine/threonine-protein kinase PBS1 143 356 - -
Mch11g0054 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch11g0054 385 MobiDBLite consensus disorder prediction 28 48 - -
Mch11g0054 385 Pfam Protein kinase domain 68 336 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0054 Mch-Chr11:338613 Mch8g2045 Mch-Chr8:23342933 1.98E-164 dispersed
Mch8g1013 Mch-Chr8:7183135 Mch11g0054 Mch-Chr11:338613 3.10E-76 dispersed
Mch9g0166 Mch-Chr9:1268020 Mch11g0054 Mch-Chr11:338613 5.14E-78 dispersed
Mch1g0797 Mch-Chr1:11594280 Mch11g0054 Mch-Chr11:338613 1.36E-55 transposed
Mch11g0054 Mch-Chr11:338613 Mch4g0400 Mch-Chr4:2569031 1.47E-94 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77037 PF00069 Pkinase 1.00E-44 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch11g0054 - - - 0.0