Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch11g0054 | ATGAGCTGCTTTTCTTGCATTCGTACTCGCTGTAAAGACGCCAGCAAGGTCGAAATCGATAATGGGAGTGGGAGAGGAAAGTCGTATTGGAATGAAACTGGAAAGGGGAAGGAATCACAAAGCAGAAGCGGAAACAACCGGAAATGCGGGGCTGCGCGGAGCTTCCAGTTTCGTGAACTGGCAACGGCCACGAGAGGTTTCAAGGAAGTGAACTTGATTGGTGAAGGGGGTTTTGGAAGGGTTTACAAAGGCCGATTAGAAACGGGCCAGGTCGTTGCGATTAAACAACTCAATCATGACGGTCTTCAAGGATTTCAGGAATTCATCGTCGAAGTTCTCATGCTAAGCTTATTGCATCATTGTAATCTTGTTACCTTGATTGGTTATTGTACTGATGGAGATCAAAGACTGTTGGTTTACGAGTATATGTCGATGGGAAGCTTGGAAAACCATCTTTTTGGCTTGTCCCCCGAAAGACCACCATTGAGTTGGAACACCCGAATCAAGATTGCCCTTGGTGCAGCCCGGGGCCTCGAGTATCTTCACTGCACAGCCAATCCACCAGTCATCTACCGTGACTTGAAATCTGCAAATATTTTACTAGACGATGACTTCAATCCAAAGCTCTCGGATTTTGGACTGGCTAAGTTAGCACCGGTCGGTGACAACACCCATGTTTCCACCAGAGTGATGGGAACATATGGTTATTGTGCTCCGGAGTATGCCATGAGCGGCAAACTGACTCTTAAATCTGATATCTATTGCTTTGGTGTGGTTCTCTTGGAGATAATTACAGGTAGGAAAGCCATAGACTGCACCAAGAAACCTGGAGAGCAAAATCTGGTCGCTTGGTCTCGCCCTTTTCTGAAGGACCGGAGGAAGTTCGTTCAATTAGTTGACCCGCTACTGGAAGGACGATACCCTCTTCGATGTCTTCACCATGCAATCGCAATTGCTGCAATGTGCCTCCAGGAGCAGCCAACGTTCCGGCCAATTATCAGTGATATCGTTGTAGCTCTTGAGTACTTAGTTTCTCAGAGTCACGCATCAGAACAATCATGGGACGGGGCACCTAGTCCCTCCAAACGATCTCCTCAACAGGGTAGGAGCATCCATGTTCAAGAAACAAGATATGGAAGGAGTTCAACAACCATATAA | 1158 | 46.98 | MSCFSCIRTRCKDASKVEIDNGSGRGKSYWNETGKGKESQSRSGNNRKCGAARSFQFRELATATRGFKEVNLIGEGGFGRVYKGRLETGQVVAIKQLNHDGLQGFQEFIVEVLMLSLLHHCNLVTLIGYCTDGDQRLLVYEYMSMGSLENHLFGLSPERPPLSWNTRIKIALGAARGLEYLHCTANPPVIYRDLKSANILLDDDFNPKLSDFGLAKLAPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYCFGVVLLEIITGRKAIDCTKKPGEQNLVAWSRPFLKDRRKFVQLVDPLLEGRYPLRCLHHAIAIAAMCLQEQPTFRPIISDIVVALEYLVSQSHASEQSWDGAPSPSKRSPQQGRSIHVQETRYGRSSTTI | 385 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 338613 | 342441 | + | MC11g0049 | Mch11g0054 | 678988 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch11g0054 | 385 | SUPERFAMILY | Protein kinase-like (PK-like) | 48 | 341 | IPR011009 | - | |
Mch11g0054 | 385 | CDD | STKc_IRAK | 73 | 341 | - | - | |
Mch11g0054 | 385 | MobiDBLite | consensus disorder prediction | 33 | 48 | - | - | |
Mch11g0054 | 385 | Gene3D | Phosphorylase Kinase; domain 1 | 37 | 142 | - | - | |
Mch11g0054 | 385 | SMART | serkin_6 | 67 | 343 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch11g0054 | 385 | ProSiteProfiles | Protein kinase domain profile. | 67 | 343 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch11g0054 | 385 | ProSitePatterns | Protein kinases ATP-binding region signature. | 73 | 95 | IPR017441 | GO:0005524(InterPro) | |
Mch11g0054 | 385 | Gene3D | Transferase(Phosphotransferase) domain 1 | 143 | 359 | - | - | |
Mch11g0054 | 385 | PANTHER | OS07G0668900 PROTEIN | 37 | 359 | - | - | |
Mch11g0054 | 385 | MobiDBLite | consensus disorder prediction | 351 | 385 | - | - | |
Mch11g0054 | 385 | FunFam | probable serine/threonine-protein kinase RLCKVII | 37 | 142 | - | - | |
Mch11g0054 | 385 | FunFam | Serine/threonine-protein kinase PBS1 | 143 | 356 | - | - | |
Mch11g0054 | 385 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 189 | 201 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch11g0054 | 385 | MobiDBLite | consensus disorder prediction | 28 | 48 | - | - | |
Mch11g0054 | 385 | Pfam | Protein kinase domain | 68 | 336 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g0054 | Mch-Chr11:338613 | Mch8g2045 | Mch-Chr8:23342933 | 1.98E-164 | dispersed | |
Mch8g1013 | Mch-Chr8:7183135 | Mch11g0054 | Mch-Chr11:338613 | 3.10E-76 | dispersed | |
Mch9g0166 | Mch-Chr9:1268020 | Mch11g0054 | Mch-Chr11:338613 | 5.14E-78 | dispersed | |
Mch1g0797 | Mch-Chr1:11594280 | Mch11g0054 | Mch-Chr11:338613 | 1.36E-55 | transposed | |
Mch11g0054 | Mch-Chr11:338613 | Mch4g0400 | Mch-Chr4:2569031 | 1.47E-94 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77037 | PF00069 | Pkinase | 1.00E-44 | CL0016 | Mch | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch11g0054 | - | - | - | 0.0 |